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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919609
Clone id YMU001_000127_B04
Library
Length 345
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTGGACAAGACGAACGACCAGGACTATGCCCTGAGAAACCGAGGGCAGACGCTTTTGTCA
CTAGTTTCCTCTAGACTCGAAAGGCCAGCATTATCTACACTCTTAGGGCGATGACTTTTC
CATTGATAGACCCATTTCGGTGGGCGTGACAATGACCAAGTACCTCTGTTCAGAGGCCCA
GGTACTGCCGGACTTGCTTCGGTCTTCCCTTCGGAGATCATGATTTGGAGATCATGATTC
TTCTTTTTACGGACATGACCATTTCCAATGTCCATGGACAAATCTTTCATGTTCTAACTT
GTAAGACTTAACTTGCAAGTACTTAGTACTACGTACTAAGGTCTA
■■Homology search results ■■ -
sp_hit_id P45988
Definition sp|P45988|HIFA3_HAEIN Major fimbrial subunit OS=Haemophilus influenzae
Align length 32
Score (bit) 29.6
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919609|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_B04.
         (345 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P45988|HIFA3_HAEIN Major fimbrial subunit OS=Haemophilus infl...    30   4.9  
sp|O43610|SPY3_HUMAN Protein sprouty homolog 3 OS=Homo sapiens G...    29   8.3  
sp|Q9KQZ9|SYC_VIBCH Cysteinyl-tRNA synthetase OS=Vibrio cholerae...    29   8.3  
sp|A5F763|SYC_VIBC3 Cysteinyl-tRNA synthetase OS=Vibrio cholerae...    29   8.3  

>sp|P45988|HIFA3_HAEIN Major fimbrial subunit OS=Haemophilus
           influenzae GN=hifA PE=3 SV=1
          Length = 212

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -2

Query: 332 VVLSTCKLSLTS*NMKDLSMDIGNGHVRKKKN 237
           VV +TCK+   S NM  +  D+G  H++ KK+
Sbjct: 37  VVENTCKVKTDSKNMSVVLNDVGKNHLKTKKD 68


>sp|O43610|SPY3_HUMAN Protein sprouty homolog 3 OS=Homo sapiens
           GN=SPRY3 PE=1 SV=2
          Length = 288

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 198 SKSGSTWASEQRYLVIVTPTEMGLSMEKSSP 106
           S S ST AS+QR L  +TP+  G S+ ++ P
Sbjct: 87  SMSHSTTASDQRLLASITPSPSGQSIIRTQP 117


>sp|Q9KQZ9|SYC_VIBCH Cysteinyl-tRNA synthetase OS=Vibrio cholerae
           GN=cysS PE=3 SV=1
          Length = 459

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = -2

Query: 248 KKKNHDLQIMISEGKTEASPAVPGPLNRGTWSLSRP--PKWVYQWKSHRP 105
           K    DL  + +  + +   A   PL+   W +S+P  P W   W S RP
Sbjct: 154 KLSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGSGRP 203


>sp|A5F763|SYC_VIBC3 Cysteinyl-tRNA synthetase OS=Vibrio cholerae
           serotype O1 (strain ATCC 39541 / Ogawa 395 / O395)
           GN=cysS PE=3 SV=1
          Length = 459

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
 Frame = -2

Query: 248 KKKNHDLQIMISEGKTEASPAVPGPLNRGTWSLSRP--PKWVYQWKSHRP 105
           K    DL  + +  + +   A   PL+   W +S+P  P W   W S RP
Sbjct: 154 KLSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGSGRP 203
tr_hit_id Q0CHU5
Definition tr|Q0CHU5|Q0CHU5_ASPTN Putative uncharacterized protein OS=Aspergillus terreus (strain NIH 2624)
Align length 87
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919609|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_B04.
         (345 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0CHU5|Q0CHU5_ASPTN Putative uncharacterized protein OS=Asper...    36   1.1  
tr|Q28WS4|Q28WS4_DROPS GA11604 OS=Drosophila pseudoobscura pseud...    35   2.4  
tr|B4H6C0|B4H6C0_DROPE GL20643 OS=Drosophila persimilis GN=GL206...    35   2.4  
tr|A4RJE3|A4RJE3_MAGGR Putative uncharacterized protein OS=Magna...    34   4.2  
tr|Q17AQ5|Q17AQ5_AEDAE Putative uncharacterized protein OS=Aedes...    33   7.1  
tr|A9REL2|A9REL2_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.3  
tr|B2LSQ1|B2LSQ1_COLAN NADH dehydrogenase subunit 5 OS=Colobus a...    33   9.3  
tr|Q4DUZ9|Q4DUZ9_TRYCR Protein kinase, putative OS=Trypanosoma c...    33   9.3  

>tr|Q0CHU5|Q0CHU5_ASPTN Putative uncharacterized protein
            OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_06739
            PE=4 SV=1
          Length = 1329

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 7/87 (8%)
 Frame = -2

Query: 275  MDIGNGHVRKKKNHDLQIMISEGKTEASPAVPGPLNR--GTWSLSRPPKWVYQWKSHRPK 102
            + IG+G V  K+  D + +  + +  + P V  P++     W+ +RPP    + KS +P 
Sbjct: 1164 LPIGDGEVSAKQVEDAEEIFEDREAGSLPVVQVPISAPPAAWTAARPPSQARRAKSLKPM 1223

Query: 101  SVDN-----AGLSSLEETSDKSVCPRF 36
             V +      GLS  + + +  V  RF
Sbjct: 1224 QVHSVEPYTVGLSDKDNSGNLRVSVRF 1250


>tr|Q28WS4|Q28WS4_DROPS GA11604 OS=Drosophila pseudoobscura
           pseudoobscura GN=GA11604 PE=4 SV=2
          Length = 552

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
 Frame = -2

Query: 269 IGNGHVRKKK-------NHDLQIMISEGKTEASPAVPGPL--NRGTWSLSRPPKWVYQWK 117
           +G G  RKK        N D  +  S+ K   SP++ GP   N+   + SR   +V   K
Sbjct: 359 MGRGRGRKKASKRGSEDNDDESVSASKKKAHGSPSMTGPFECNQCDLTFSRKQSYVLHRK 418

Query: 116 SHRPKSV 96
           SH P+SV
Sbjct: 419 SHDPRSV 425


>tr|B4H6C0|B4H6C0_DROPE GL20643 OS=Drosophila persimilis GN=GL20643
           PE=4 SV=1
          Length = 551

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 9/67 (13%)
 Frame = -2

Query: 269 IGNGHVRKKK-------NHDLQIMISEGKTEASPAVPGPL--NRGTWSLSRPPKWVYQWK 117
           +G G  RKK        N D  +  S+ K   SP++ GP   N+   + SR   +V   K
Sbjct: 358 MGRGRGRKKATKRGSEDNDDESVSASKKKAHGSPSMTGPFECNQCDLTFSRKQSYVLHRK 417

Query: 116 SHRPKSV 96
           SH P+SV
Sbjct: 418 SHDPRSV 424


>tr|A4RJE3|A4RJE3_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_01849 PE=4 SV=1
          Length = 826

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 23/72 (31%), Positives = 33/72 (45%)
 Frame = -2

Query: 263 NGHVRKKKNHDLQIMISEGKTEASPAVPGPLNRGTWSLSRPPKWVYQWKSHRPKSVDNAG 84
           NG VR KKNH    ++ + +++ S A    L     S   P  W+  +K  R +   N G
Sbjct: 458 NGFVRSKKNHSKSSLLEQNQSQNSSAT---LKASESSFKGPMSWISIFKWGRKR---NPG 511

Query: 83  LSSLEETSDKSV 48
            SS   TS  S+
Sbjct: 512 PSSFSNTSRDSM 523


>tr|Q17AQ5|Q17AQ5_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL005230 PE=4 SV=1
          Length = 515

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +3

Query: 78  RKASIIYTLRAMTFPLIDPFRWA*Q*PSTS-VQRPRYCRTCFGLPFGDHDLEIMILLFTD 254
           R  +I+Y L   T  +++P       P    V+R R  + C G P+   DL I I L   
Sbjct: 114 RYVNILYFLEDDTMTVLEPVIENCGYPQGRLVRRGRILKNCLGEPYSWKDLNIGIDL--- 170

Query: 255 MTISNVHGQIFHVLTC 302
                +HG +FHV  C
Sbjct: 171 ----EIHGYVFHVTDC 182


>tr|A9REL2|A9REL2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_65109 PE=4 SV=1
          Length = 420

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = +3

Query: 156 PSTSV-QRPRYCRT---CFGLPFGDHDLEIMILLFTDMTISNVHGQIFHVLTCKT*LAST 323
           PST V  RP Y R    CF +  G + L     LF    + ++ G+I+ VL C T + +T
Sbjct: 86  PSTPVGNRPLYTRNGIPCFLITLGVYYLLWRERLFNPAMVYDIIGEIYSVLICATYITTT 145

Query: 324 *YYV 335
             YV
Sbjct: 146 LLYV 149


>tr|B2LSQ1|B2LSQ1_COLAN NADH dehydrogenase subunit 5 OS=Colobus
           angolensis palliatus GN=NADH5 PE=4 SV=1
          Length = 601

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +3

Query: 90  IIYTLRAMTFPLIDPFRWA*Q*PSTSVQRPRYCRTCFGLPFGDHDLEIMILLFT--DMTI 263
           I+ TL ++TFP+I         PS  +  P Y +T     F    L +++ +FT  DM I
Sbjct: 6   IMLTLTSLTFPIIMTLIS----PSKKLMYPHYVKTIMMFAFTLSLLPMVLFIFTDQDMII 61

Query: 264 SNVH 275
           SN+H
Sbjct: 62  SNLH 65


>tr|Q4DUZ9|Q4DUZ9_TRYCR Protein kinase, putative OS=Trypanosoma
           cruzi GN=Tc00.1047053506811.180 PE=4 SV=1
          Length = 1409

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = -2

Query: 176 PLNRGTWSLSRPPKWVYQWKSHRPKSVDNAGLSSLEETS 60
           P  R T S  RPP W Y +KS+   S+ N G  S  E+S
Sbjct: 86  PRQRPTSSEDRPPSWTYGYKSNLDNSLLNIGEWSQSESS 124