BP919610
Clone id YMU001_000127_B05
Library
Length 521
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_B05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGAGAAGGGTCTTGTGAGTAACTGCGGGATTACTGCAAATCGGTATCAATACTACGGCTT
CAGTGTCACTTGCAGCGGACAGGCAGTTACAGTTGGTCTTGGGTTCACATTGGGTGGATG
CTGGTCTGGGCGGTGACATGTGGCAGATACAAGCGGTGGTGGATTAATGGACACAGTGGC
CAGTTCACCGCCACCACAATTCGGAGATAGACGTAGCTGGCTGTCAGGGATATTTTGTTA
GCCATTGGCTACTCTTTAGGGTTGTATATATTCTCAATTGTTCTTAGCCTAGAGAATTGT
GTCTTGTGTTCAGACTAGCACCGCACATCTGCACTCTCCCTGCACAATTGGGGCCTCGAC
ACCCCCATTGCACATATGAGTCGTGGGCTTGGAGCTAAGTGCGCTGCCAGGCAAAGTCTG
TACTGGTTCCATTGAGTACCTGTGAGTCTTGGGCTTGGAGCTGAGTGTGCTTCCAGCTAG
AGTCAGTACTGGTTCAGTACTGGTTTCATTAGTTAGTCCAG
■■Homology search results ■■ -
sp_hit_id A9N5A3
Definition sp|A9N5A3|MENH_SALPB 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Align length 53
Score (bit) 32.3
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919610|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_B05.
(521 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A9N5A3|MENH_SALPB 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 32 1.4
sp|Q4ZHG4|FNDC1_HUMAN Fibronectin type III domain-containing pro... 32 2.4
sp|Q8VDC0|SYLM_MOUSE Probable leucyl-tRNA synthetase, mitochondr... 31 3.1
sp|P28054|PHOSP_PI1HC Phosphoprotein OS=Human parainfluenza 1 vi... 31 3.1
sp|P32530|PHOSP_PI1HB Phosphoprotein OS=Human parainfluenza 1 vi... 31 3.1
sp|Q8Z534|MENH_SALTI 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 31 3.1
sp|Q5R9W2|MARH7_PONAB E3 ubiquitin-protein ligase MARCH7 OS=Pong... 31 3.1
sp|Q9H992|MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 OS=Homo... 31 3.1
sp|Q92258|GRISA_PODAN Protein GRISEA OS=Podospora anserina GN=gr... 31 3.1
sp|Q5RDP4|SYLM_PONAB Probable leucyl-tRNA synthetase, mitochondr... 31 4.0
sp|Q15031|SYLM_HUMAN Probable leucyl-tRNA synthetase, mitochondr... 31 4.0
sp|Q8ZNE9|MENH_SALTY 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 31 4.0
sp|Q57M48|MENH_SALCH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 31 4.0
sp|Q9WV66|MARH7_MOUSE E3 ubiquitin-protein ligase MARCH7 OS=Mus ... 31 4.0
sp|Q6UWK7|CJ099_HUMAN Putative uncharacterized protein C10orf99 ... 30 6.9
sp|Q4ACU6|SHAN3_MOUSE SH3 and multiple ankyrin repeat domains pr... 30 9.0
sp|A9MJB7|MENH_SALAR 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 30 9.0
sp|P22534|GUNA_CALSA Endoglucanase A OS=Caldocellum saccharolyti... 30 9.0
sp|Q8IWB4|F75A7_HUMAN Protein FAM75A7 OS=Homo sapiens GN=FAM75A7... 30 9.0
sp|Q5VU36|F75A5_HUMAN Protein FAM75A5 OS=Homo sapiens GN=FAM75A5... 30 9.0
sp|Q4VX67|F75A4_HUMAN Protein FAM75A4 OS=Homo sapiens GN=FAM75A4... 30 9.0
sp|Q5VYP0|F75A3_HUMAN Protein FAM75A3 OS=Homo sapiens GN=FAM75A3... 30 9.0
sp|P10040|CRB_DROME Protein crumbs OS=Drosophila melanogaster GN... 30 9.0
sp|Q3MJK5|CD2L7_RAT Cell division cycle 2-related protein kinase... 30 9.0

>sp|A9N5A3|MENH_SALPB
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250
/ SPB7) GN=menH PE=3 SV=1
Length = 252

Score = 32.3 bits (72), Expect = 1.4
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = -2

Query: 346 CAGRVQMCGASLNTRHNSLG*EQLRIYTTLKSSQWLTKYP*QPATSISELWWR 188
C G +CG + H L EQ R+ L +W ++ +P T + W++
Sbjct: 97 CQGIPGLCGLVVEGGHPGLQNEQARVERRLSDGRWAERFRREPLTEVFHDWYQ 149


>sp|Q4ZHG4|FNDC1_HUMAN Fibronectin type III domain-containing protein
1 OS=Homo sapiens GN=FNDC1 PE=1 SV=3
Length = 1888

Score = 31.6 bits (70), Expect = 2.4
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = -3

Query: 207 SPNCGGGELATVSINPPPLVSATCHRPDQHPPNVNPRPTVTACPLQVTLKP 55
+P + +S+ PLV + HPP +PT T PL T P
Sbjct: 1416 TPLANAQDKPILSLGGKPLVGLEVIKKTTHPPTTTMQPTTTTTPLPTTTTP 1466


>sp|Q8VDC0|SYLM_MOUSE Probable leucyl-tRNA synthetase, mitochondrial
OS=Mus musculus GN=Lars2 PE=2 SV=1
Length = 902

Score = 31.2 bits (69), Expect = 3.1
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +3

Query: 327 ICTLPAQLGPRHPHCTYESWAWS*VRCQAKSVLVPLSTCESWAWS*VCFQLESVLVQYW 503
+C L P PH T E W A LVP C+ +AW V++Q W
Sbjct: 780 LCALLVMAAPLAPHVTSELW--------AGLTLVPSKLCDHYAWD------SGVMLQAW 824


>sp|P28054|PHOSP_PI1HC Phosphoprotein OS=Human parainfluenza 1 virus
(strain C39) GN=P/C PE=2 SV=1
Length = 568

Score = 31.2 bits (69), Expect = 3.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2

Query: 161 GLMDTVASSPPPQFGDRRSWLSGI 232
GL+D V S P + G+ RSWL GI
Sbjct: 30 GLLDVVLSYKPTEIGEDRSWLHGI 53


>sp|P32530|PHOSP_PI1HB Phosphoprotein OS=Human parainfluenza 1 virus
(strain C35) GN=P/C PE=3 SV=2
Length = 568

Score = 31.2 bits (69), Expect = 3.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2

Query: 161 GLMDTVASSPPPQFGDRRSWLSGI 232
GL+D V S P + G+ RSWL GI
Sbjct: 30 GLLDVVLSYKPTEIGEDRSWLHGI 53


>sp|Q8Z534|MENH_SALTI
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
synthase OS=Salmonella typhi GN=menH PE=3 SV=1
Length = 252

Score = 31.2 bits (69), Expect = 3.1
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -2

Query: 349 NCAGRVQMCGASLNTRHNSLG*EQLRIYTTLKSSQWLTKYP*QPATSISELWWR 188
+C G +CG + H L EQ R L +W ++ +P T + W++
Sbjct: 96 SCQGIPGLCGLVVEGGHPGLQNEQARAERRLSDGRWAERFRHEPLTEVFHDWYQ 149


>sp|Q5R9W2|MARH7_PONAB E3 ubiquitin-protein ligase MARCH7 OS=Pongo
abelii GN=MARCH7 PE=2 SV=1
Length = 707

Score = 31.2 bits (69), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2

Query: 493 TSTDSSWKHTQLQAQDSQVLNGTSTDFAWQRT*LQ 389
T +DSSW+H+Q+ S VL TD +R L+
Sbjct: 113 TLSDSSWRHSQVPRSSSMVLGSFGTDLMRERRDLE 147


>sp|Q9H992|MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 OS=Homo
sapiens GN=MARCH7 PE=1 SV=1
Length = 704

Score = 31.2 bits (69), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2

Query: 493 TSTDSSWKHTQLQAQDSQVLNGTSTDFAWQRT*LQ 389
T +DSSW+H+Q+ S VL TD +R L+
Sbjct: 113 TLSDSSWRHSQVPRSSSMVLGSFGTDLMRERRDLE 147


>sp|Q92258|GRISA_PODAN Protein GRISEA OS=Podospora anserina
GN=grisea PE=3 SV=1
Length = 597

Score = 31.2 bits (69), Expect = 3.1
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = -3

Query: 198 CGGGELATVSINPPPLVSATCHRPDQHPPNVNPRPTVTACP 76
CGGG+ A PPP+ + P Q PN+ P P P
Sbjct: 277 CGGGKKAPQIQAPPPVPAPLPTPPQQQMPNIMPPPQPQNAP 317


>sp|Q5RDP4|SYLM_PONAB Probable leucyl-tRNA synthetase, mitochondrial
OS=Pongo abelii GN=LARS2 PE=2 SV=1
Length = 903

Score = 30.8 bits (68), Expect = 4.0
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +3

Query: 327 ICTLPAQLGPRHPHCTYESWAWS*VRCQAKSVLVPLSTCESWAWS*VCFQLESVLVQYW 503
+C L P PH T E W A LVP C + W SVL+Q W
Sbjct: 781 LCALMVMAAPMAPHVTSEIW--------AGLALVPRKLCAHYTWD------VSVLLQAW 825


tr_hit_id B4QRK4
Definition tr|B4QRK4|B4QRK4_DROSI GD13888 OS=Drosophila simulans
Align length 157
Score (bit) 34.7
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919610|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_B05.
(521 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4QRK4|B4QRK4_DROSI GD13888 OS=Drosophila simulans GN=GD13888... 35 2.9
tr|A7T3B5|A7T3B5_NEMVE Predicted protein OS=Nematostella vectens... 35 2.9
tr|A8Q0X5|A8Q0X5_BRUMA Putative uncharacterized protein OS=Brugi... 34 3.8
tr|Q7MX72|Q7MX72_PORGI Putative uncharacterized protein OS=Porph... 34 5.0
tr|A7R228|A7R228_VITVI Chromosome undetermined scaffold_394, who... 34 5.0
tr|B3MVK1|B3MVK1_DROAN GF23569 OS=Drosophila ananassae GN=GF2356... 34 5.0
tr|A8XVD9|A8XVD9_CAEBR Putative uncharacterized protein OS=Caeno... 33 6.5
tr|A7S219|A7S219_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 6.5
tr|A4F3R7|A4F3R7_9METZ Secreted frizzled related protein OS=Lubo... 33 6.5
tr|B0T714|B0T714_CAUSK Putative uncharacterized protein OS=Caulo... 33 8.5
tr|A4JKX2|A4JKX2_BURVG Endonuclease/exonuclease/phosphatase OS=B... 33 8.5
tr|B5H1W9|B5H1W9_STRCL Putative uncharacterized protein OS=Strep... 33 8.5
tr|Q23460|Q23460_CAEEL Protein ZK287.1, partially confirmed by t... 33 8.5
tr|B6KHG5|B6KHG5_TOXGO Putative uncharacterized protein OS=Toxop... 33 8.5
tr|A7RYG5|A7RYG5_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 8.5

>tr|B4QRK4|B4QRK4_DROSI GD13888 OS=Drosophila simulans GN=GD13888 PE=4
SV=1
Length = 1074

Score = 34.7 bits (78), Expect = 2.9
Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 3/157 (1%)
Frame = -3

Query: 516 LTNETSTEPVLTLAGSTLSSKPKTHRYSMEPVQTLPGSALSSKPTTHMCNGGVEAPIVQG 337
L+ ETS P ST+S+ P + +MEP T P ++ ++KPT +C G + +V
Sbjct: 872 LSTETSESP------STISTPPAST--TMEPGTTTPEASTTAKPTEGICEGKTDDSLVPY 923

Query: 336 ECRCAVLV*TQDTIL*AKNN*EYIQP*RVANG*QNIPDSQLRLSPNCGGGELATVSINPP 157
C+ + Q I + +G + P + P G T + P
Sbjct: 924 PRNCSKYIKCQYPIPVGYD---------CPDGLEFSPTELTCMDPELAGCSTKTTTPGPT 974

Query: 156 PLVSATCHRPDQHPPNVNPRPT---VTACPLQVTLKP 55
L + + P + T T P TL P
Sbjct: 975 TLSTEASYTPTTTTESTTVSTTTESTTTVPTPTTLDP 1011


>tr|A7T3B5|A7T3B5_NEMVE Predicted protein OS=Nematostella vectensis
GN=v1g144162 PE=4 SV=1
Length = 245

Score = 34.7 bits (78), Expect = 2.9
Identities = 18/51 (35%), Positives = 21/51 (41%)
Frame = +3

Query: 96 VLGSHWVDAGLGGDMWQIQAVVD*WTQWPVHRHHNSEIDVAGCQGYFVSHW 248
V GS W G WQ+ V +QW V H S+ V G SHW
Sbjct: 158 VHGSQWQVMAAHGSQWQVMVVHG--SQWQVMAAHGSQWQVMAAHGIHGSHW 206


>tr|A8Q0X5|A8Q0X5_BRUMA Putative uncharacterized protein OS=Brugia
malayi GN=Bm1_40450 PE=4 SV=1
Length = 575

Score = 34.3 bits (77), Expect = 3.8
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Frame = -2

Query: 181 GHCVH*STTACICHMSPPRPASTQCEPKTNCNCLSAASD-TEAVVLIPICSNPAVTHKTL 5
G C++ + C C P RPA C C+CL ++ IC N K L
Sbjct: 127 GDCLNQAICKCSCETDPARPAKNACSKSERCDCLRIKEPCSKLCACKQICKNKEPQKKVL 186


>tr|Q7MX72|Q7MX72_PORGI Putative uncharacterized protein
OS=Porphyromonas gingivalis GN=PG_0340 PE=4 SV=1
Length = 96

Score = 33.9 bits (76), Expect = 5.0
Identities = 21/49 (42%), Positives = 24/49 (48%)
Frame = -3

Query: 519 GLTNETSTEPVLTLAGSTLSSKPKTHRYSMEPVQTLPGSALSSKPTTHM 373
G N+ PVL L GSTL SK + P L GS L SK T +M
Sbjct: 36 GTHNDADNVPVLRLVGSTLYSKGTHNSRLARPPTRLVGSTLYSKGTHNM 84


>tr|A7R228|A7R228_VITVI Chromosome undetermined scaffold_394, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00012561001 PE=4 SV=1
Length = 347

Score = 33.9 bits (76), Expect = 5.0
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1

Query: 250 YSLGLYIFSIVLSLENCVLCSD*HRTSALSLHNWGL---DTPIAHMSRGLGAKCAARQSL 420
YS G+ + I+ +N L S H + LS H W L D + + R L KC A +++
Sbjct: 215 YSFGVLLLEILSGKKNSGLYSTDHSQNLLS-HAWQLWNEDKGLEFIDRNLVDKCPASEAV 273

Query: 421 YWFH 432
W H
Sbjct: 274 RWIH 277


>tr|B3MVK1|B3MVK1_DROAN GF23569 OS=Drosophila ananassae GN=GF23569
PE=4 SV=1
Length = 708

Score = 33.9 bits (76), Expect = 5.0
Identities = 18/50 (36%), Positives = 19/50 (38%)
Frame = -3

Query: 204 PNCGGGELATVSINPPPLVSATCHRPDQHPPNVNPRPTVTACPLQVTLKP 55
P C T S PPP TC+ P PP P PT P T P
Sbjct: 149 PTCNPPPTTTTSTPPPP----TCNPPPTEPPPTLPPPTCNPPPTSTTSAP 194


>tr|A8XVD9|A8XVD9_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG19334 PE=4 SV=1
Length = 497

Score = 33.5 bits (75), Expect = 6.5
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -2

Query: 181 GHCVH*STTACICHMSPPRPASTQCEPKTNCNCL 80
G C++ + C C + P +PA C C+CL
Sbjct: 47 GDCLNQAICKCSCEVDPAKPAKNACSKSERCDCL 80


>tr|A7S219|A7S219_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g101593 PE=4 SV=1
Length = 231

Score = 33.5 bits (75), Expect = 6.5
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = +3

Query: 84 QLQLVLGSHWVDAGLGGDMWQIQAVVD*WTQWPVHRHHNSEIDVAGCQGYFVSHWLLFRV 263
Q+ V GS W G WQ+ A +QW V H S+ V G S W + V
Sbjct: 129 QVMAVHGSQWQVMAAHGSQWQVMAAHG--SQWQVMAVHGSQWQVMAVHGIHGSQWQVMAV 186


>tr|A4F3R7|A4F3R7_9METZ Secreted frizzled related protein
OS=Lubomirskia baicalensis GN=sfrp PE=2 SV=1
Length = 335

Score = 33.5 bits (75), Expect = 6.5
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Frame = -3

Query: 210 LSPNCGGGELATVSINPPPLVSATC---HRPDQHPPNVNPRPTVTACPLQ 70
+S N GG AT + +PPP AT P PP +P P AC LQ
Sbjct: 153 VSRNGGGCINATFASSPPPSTPATTAVSSSPAPTPPTTSPAPACGACSLQ 202


>tr|B0T714|B0T714_CAUSK Putative uncharacterized protein
OS=Caulobacter sp. (strain K31) GN=Caul_3525 PE=4 SV=1
Length = 359

Score = 33.1 bits (74), Expect = 8.5
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2

Query: 113 GGCWSGR*HVADTSGGGLMD---TVASSPPPQFGDRRSWLS 226
G CW R ++ D GG+ VA+ PPPQ GD +WL+
Sbjct: 279 GSCWD-RLYLLDPPTGGIFPMAVNVATHPPPQPGDSGAWLA 318