BP919610 |
Clone id |
YMU001_000127_B05 |
Library |
YMU01 |
Length |
521 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000127_B05. |
Accession |
BP919610 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGAGAAGGGTCTTGTGAGTAACTGCGGGATTACTGCAAATCGGTATCAATACTACGGCTT CAGTGTCACTTGCAGCGGACAGGCAGTTACAGTTGGTCTTGGGTTCACATTGGGTGGATG CTGGTCTGGGCGGTGACATGTGGCAGATACAAGCGGTGGTGGATTAATGGACACAGTGGC CAGTTCACCGCCACCACAATTCGGAGATAGACGTAGCTGGCTGTCAGGGATATTTTGTTA GCCATTGGCTACTCTTTAGGGTTGTATATATTCTCAATTGTTCTTAGCCTAGAGAATTGT GTCTTGTGTTCAGACTAGCACCGCACATCTGCACTCTCCCTGCACAATTGGGGCCTCGAC ACCCCCATTGCACATATGAGTCGTGGGCTTGGAGCTAAGTGCGCTGCCAGGCAAAGTCTG TACTGGTTCCATTGAGTACCTGTGAGTCTTGGGCTTGGAGCTGAGTGTGCTTCCAGCTAG AGTCAGTACTGGTTCAGTACTGGTTTCATTAGTTAGTCCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A9N5A3 |
Definition |
sp|A9N5A3|MENH_SALPB 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) |
Align length |
53 |
Score (bit) |
32.3 |
E-value |
1.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919610|Adiantum capillus-veneris mRNA, clone: YMU001_000127_B05. (521 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|A9N5A3|MENH_SALPB 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 32 1.4 sp|Q4ZHG4|FNDC1_HUMAN Fibronectin type III domain-containing pro... 32 2.4 sp|Q8VDC0|SYLM_MOUSE Probable leucyl-tRNA synthetase, mitochondr... 31 3.1 sp|P28054|PHOSP_PI1HC Phosphoprotein OS=Human parainfluenza 1 vi... 31 3.1 sp|P32530|PHOSP_PI1HB Phosphoprotein OS=Human parainfluenza 1 vi... 31 3.1 sp|Q8Z534|MENH_SALTI 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 31 3.1 sp|Q5R9W2|MARH7_PONAB E3 ubiquitin-protein ligase MARCH7 OS=Pong... 31 3.1 sp|Q9H992|MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 OS=Homo... 31 3.1 sp|Q92258|GRISA_PODAN Protein GRISEA OS=Podospora anserina GN=gr... 31 3.1 sp|Q5RDP4|SYLM_PONAB Probable leucyl-tRNA synthetase, mitochondr... 31 4.0 sp|Q15031|SYLM_HUMAN Probable leucyl-tRNA synthetase, mitochondr... 31 4.0 sp|Q8ZNE9|MENH_SALTY 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 31 4.0 sp|Q57M48|MENH_SALCH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 31 4.0 sp|Q9WV66|MARH7_MOUSE E3 ubiquitin-protein ligase MARCH7 OS=Mus ... 31 4.0 sp|Q6UWK7|CJ099_HUMAN Putative uncharacterized protein C10orf99 ... 30 6.9 sp|Q4ACU6|SHAN3_MOUSE SH3 and multiple ankyrin repeat domains pr... 30 9.0 sp|A9MJB7|MENH_SALAR 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-c... 30 9.0 sp|P22534|GUNA_CALSA Endoglucanase A OS=Caldocellum saccharolyti... 30 9.0 sp|Q8IWB4|F75A7_HUMAN Protein FAM75A7 OS=Homo sapiens GN=FAM75A7... 30 9.0 sp|Q5VU36|F75A5_HUMAN Protein FAM75A5 OS=Homo sapiens GN=FAM75A5... 30 9.0 sp|Q4VX67|F75A4_HUMAN Protein FAM75A4 OS=Homo sapiens GN=FAM75A4... 30 9.0 sp|Q5VYP0|F75A3_HUMAN Protein FAM75A3 OS=Homo sapiens GN=FAM75A3... 30 9.0 sp|P10040|CRB_DROME Protein crumbs OS=Drosophila melanogaster GN... 30 9.0 sp|Q3MJK5|CD2L7_RAT Cell division cycle 2-related protein kinase... 30 9.0
>sp|A9N5A3|MENH_SALPB 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=menH PE=3 SV=1 Length = 252
Score = 32.3 bits (72), Expect = 1.4 Identities = 14/53 (26%), Positives = 24/53 (45%) Frame = -2
Query: 346 CAGRVQMCGASLNTRHNSLG*EQLRIYTTLKSSQWLTKYP*QPATSISELWWR 188 C G +CG + H L EQ R+ L +W ++ +P T + W++ Sbjct: 97 CQGIPGLCGLVVEGGHPGLQNEQARVERRLSDGRWAERFRREPLTEVFHDWYQ 149
>sp|Q4ZHG4|FNDC1_HUMAN Fibronectin type III domain-containing protein 1 OS=Homo sapiens GN=FNDC1 PE=1 SV=3 Length = 1888
Score = 31.6 bits (70), Expect = 2.4 Identities = 15/51 (29%), Positives = 21/51 (41%) Frame = -3
Query: 207 SPNCGGGELATVSINPPPLVSATCHRPDQHPPNVNPRPTVTACPLQVTLKP 55 +P + +S+ PLV + HPP +PT T PL T P Sbjct: 1416 TPLANAQDKPILSLGGKPLVGLEVIKKTTHPPTTTMQPTTTTTPLPTTTTP 1466
>sp|Q8VDC0|SYLM_MOUSE Probable leucyl-tRNA synthetase, mitochondrial OS=Mus musculus GN=Lars2 PE=2 SV=1 Length = 902
Score = 31.2 bits (69), Expect = 3.1 Identities = 18/59 (30%), Positives = 23/59 (38%) Frame = +3
Query: 327 ICTLPAQLGPRHPHCTYESWAWS*VRCQAKSVLVPLSTCESWAWS*VCFQLESVLVQYW 503 +C L P PH T E W A LVP C+ +AW V++Q W Sbjct: 780 LCALLVMAAPLAPHVTSELW--------AGLTLVPSKLCDHYAWD------SGVMLQAW 824
>sp|P28054|PHOSP_PI1HC Phosphoprotein OS=Human parainfluenza 1 virus (strain C39) GN=P/C PE=2 SV=1 Length = 568
Score = 31.2 bits (69), Expect = 3.1 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +2
Query: 161 GLMDTVASSPPPQFGDRRSWLSGI 232 GL+D V S P + G+ RSWL GI Sbjct: 30 GLLDVVLSYKPTEIGEDRSWLHGI 53
>sp|P32530|PHOSP_PI1HB Phosphoprotein OS=Human parainfluenza 1 virus (strain C35) GN=P/C PE=3 SV=2 Length = 568
Score = 31.2 bits (69), Expect = 3.1 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +2
Query: 161 GLMDTVASSPPPQFGDRRSWLSGI 232 GL+D V S P + G+ RSWL GI Sbjct: 30 GLLDVVLSYKPTEIGEDRSWLHGI 53
>sp|Q8Z534|MENH_SALTI 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase OS=Salmonella typhi GN=menH PE=3 SV=1 Length = 252
Score = 31.2 bits (69), Expect = 3.1 Identities = 14/54 (25%), Positives = 24/54 (44%) Frame = -2
Query: 349 NCAGRVQMCGASLNTRHNSLG*EQLRIYTTLKSSQWLTKYP*QPATSISELWWR 188 +C G +CG + H L EQ R L +W ++ +P T + W++ Sbjct: 96 SCQGIPGLCGLVVEGGHPGLQNEQARAERRLSDGRWAERFRHEPLTEVFHDWYQ 149
>sp|Q5R9W2|MARH7_PONAB E3 ubiquitin-protein ligase MARCH7 OS=Pongo abelii GN=MARCH7 PE=2 SV=1 Length = 707
Score = 31.2 bits (69), Expect = 3.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2
Query: 493 TSTDSSWKHTQLQAQDSQVLNGTSTDFAWQRT*LQ 389 T +DSSW+H+Q+ S VL TD +R L+ Sbjct: 113 TLSDSSWRHSQVPRSSSMVLGSFGTDLMRERRDLE 147
>sp|Q9H992|MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 OS=Homo sapiens GN=MARCH7 PE=1 SV=1 Length = 704
Score = 31.2 bits (69), Expect = 3.1 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -2
Query: 493 TSTDSSWKHTQLQAQDSQVLNGTSTDFAWQRT*LQ 389 T +DSSW+H+Q+ S VL TD +R L+ Sbjct: 113 TLSDSSWRHSQVPRSSSMVLGSFGTDLMRERRDLE 147
>sp|Q92258|GRISA_PODAN Protein GRISEA OS=Podospora anserina GN=grisea PE=3 SV=1 Length = 597
Score = 31.2 bits (69), Expect = 3.1 Identities = 15/41 (36%), Positives = 19/41 (46%) Frame = -3
Query: 198 CGGGELATVSINPPPLVSATCHRPDQHPPNVNPRPTVTACP 76 CGGG+ A PPP+ + P Q PN+ P P P Sbjct: 277 CGGGKKAPQIQAPPPVPAPLPTPPQQQMPNIMPPPQPQNAP 317
>sp|Q5RDP4|SYLM_PONAB Probable leucyl-tRNA synthetase, mitochondrial OS=Pongo abelii GN=LARS2 PE=2 SV=1 Length = 903
Score = 30.8 bits (68), Expect = 4.0 Identities = 19/59 (32%), Positives = 22/59 (37%) Frame = +3
Query: 327 ICTLPAQLGPRHPHCTYESWAWS*VRCQAKSVLVPLSTCESWAWS*VCFQLESVLVQYW 503 +C L P PH T E W A LVP C + W SVL+Q W Sbjct: 781 LCALMVMAAPMAPHVTSEIW--------AGLALVPRKLCAHYTWD------VSVLLQAW 825
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4QRK4 |
Definition |
tr|B4QRK4|B4QRK4_DROSI GD13888 OS=Drosophila simulans |
Align length |
157 |
Score (bit) |
34.7 |
E-value |
2.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919610|Adiantum capillus-veneris mRNA, clone: YMU001_000127_B05. (521 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4QRK4|B4QRK4_DROSI GD13888 OS=Drosophila simulans GN=GD13888... 35 2.9 tr|A7T3B5|A7T3B5_NEMVE Predicted protein OS=Nematostella vectens... 35 2.9 tr|A8Q0X5|A8Q0X5_BRUMA Putative uncharacterized protein OS=Brugi... 34 3.8 tr|Q7MX72|Q7MX72_PORGI Putative uncharacterized protein OS=Porph... 34 5.0 tr|A7R228|A7R228_VITVI Chromosome undetermined scaffold_394, who... 34 5.0 tr|B3MVK1|B3MVK1_DROAN GF23569 OS=Drosophila ananassae GN=GF2356... 34 5.0 tr|A8XVD9|A8XVD9_CAEBR Putative uncharacterized protein OS=Caeno... 33 6.5 tr|A7S219|A7S219_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 6.5 tr|A4F3R7|A4F3R7_9METZ Secreted frizzled related protein OS=Lubo... 33 6.5 tr|B0T714|B0T714_CAUSK Putative uncharacterized protein OS=Caulo... 33 8.5 tr|A4JKX2|A4JKX2_BURVG Endonuclease/exonuclease/phosphatase OS=B... 33 8.5 tr|B5H1W9|B5H1W9_STRCL Putative uncharacterized protein OS=Strep... 33 8.5 tr|Q23460|Q23460_CAEEL Protein ZK287.1, partially confirmed by t... 33 8.5 tr|B6KHG5|B6KHG5_TOXGO Putative uncharacterized protein OS=Toxop... 33 8.5 tr|A7RYG5|A7RYG5_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 8.5
>tr|B4QRK4|B4QRK4_DROSI GD13888 OS=Drosophila simulans GN=GD13888 PE=4 SV=1 Length = 1074
Score = 34.7 bits (78), Expect = 2.9 Identities = 37/157 (23%), Positives = 59/157 (37%), Gaps = 3/157 (1%) Frame = -3
Query: 516 LTNETSTEPVLTLAGSTLSSKPKTHRYSMEPVQTLPGSALSSKPTTHMCNGGVEAPIVQG 337 L+ ETS P ST+S+ P + +MEP T P ++ ++KPT +C G + +V Sbjct: 872 LSTETSESP------STISTPPAST--TMEPGTTTPEASTTAKPTEGICEGKTDDSLVPY 923
Query: 336 ECRCAVLV*TQDTIL*AKNN*EYIQP*RVANG*QNIPDSQLRLSPNCGGGELATVSINPP 157 C+ + Q I + +G + P + P G T + P Sbjct: 924 PRNCSKYIKCQYPIPVGYD---------CPDGLEFSPTELTCMDPELAGCSTKTTTPGPT 974
Query: 156 PLVSATCHRPDQHPPNVNPRPT---VTACPLQVTLKP 55 L + + P + T T P TL P Sbjct: 975 TLSTEASYTPTTTTESTTVSTTTESTTTVPTPTTLDP 1011
>tr|A7T3B5|A7T3B5_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g144162 PE=4 SV=1 Length = 245
Score = 34.7 bits (78), Expect = 2.9 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = +3
Query: 96 VLGSHWVDAGLGGDMWQIQAVVD*WTQWPVHRHHNSEIDVAGCQGYFVSHW 248 V GS W G WQ+ V +QW V H S+ V G SHW Sbjct: 158 VHGSQWQVMAAHGSQWQVMVVHG--SQWQVMAAHGSQWQVMAAHGIHGSHW 206
>tr|A8Q0X5|A8Q0X5_BRUMA Putative uncharacterized protein OS=Brugia malayi GN=Bm1_40450 PE=4 SV=1 Length = 575
Score = 34.3 bits (77), Expect = 3.8 Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 1/60 (1%) Frame = -2
Query: 181 GHCVH*STTACICHMSPPRPASTQCEPKTNCNCLSAASD-TEAVVLIPICSNPAVTHKTL 5 G C++ + C C P RPA C C+CL ++ IC N K L Sbjct: 127 GDCLNQAICKCSCETDPARPAKNACSKSERCDCLRIKEPCSKLCACKQICKNKEPQKKVL 186
>tr|Q7MX72|Q7MX72_PORGI Putative uncharacterized protein OS=Porphyromonas gingivalis GN=PG_0340 PE=4 SV=1 Length = 96
Score = 33.9 bits (76), Expect = 5.0 Identities = 21/49 (42%), Positives = 24/49 (48%) Frame = -3
Query: 519 GLTNETSTEPVLTLAGSTLSSKPKTHRYSMEPVQTLPGSALSSKPTTHM 373 G N+ PVL L GSTL SK + P L GS L SK T +M Sbjct: 36 GTHNDADNVPVLRLVGSTLYSKGTHNSRLARPPTRLVGSTLYSKGTHNM 84
>tr|A7R228|A7R228_VITVI Chromosome undetermined scaffold_394, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00012561001 PE=4 SV=1 Length = 347
Score = 33.9 bits (76), Expect = 5.0 Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = +1
Query: 250 YSLGLYIFSIVLSLENCVLCSD*HRTSALSLHNWGL---DTPIAHMSRGLGAKCAARQSL 420 YS G+ + I+ +N L S H + LS H W L D + + R L KC A +++ Sbjct: 215 YSFGVLLLEILSGKKNSGLYSTDHSQNLLS-HAWQLWNEDKGLEFIDRNLVDKCPASEAV 273
Query: 421 YWFH 432 W H Sbjct: 274 RWIH 277
>tr|B3MVK1|B3MVK1_DROAN GF23569 OS=Drosophila ananassae GN=GF23569 PE=4 SV=1 Length = 708
Score = 33.9 bits (76), Expect = 5.0 Identities = 18/50 (36%), Positives = 19/50 (38%) Frame = -3
Query: 204 PNCGGGELATVSINPPPLVSATCHRPDQHPPNVNPRPTVTACPLQVTLKP 55 P C T S PPP TC+ P PP P PT P T P Sbjct: 149 PTCNPPPTTTTSTPPPP----TCNPPPTEPPPTLPPPTCNPPPTSTTSAP 194
>tr|A8XVD9|A8XVD9_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae GN=CBG19334 PE=4 SV=1 Length = 497
Score = 33.5 bits (75), Expect = 6.5 Identities = 11/34 (32%), Positives = 17/34 (50%) Frame = -2
Query: 181 GHCVH*STTACICHMSPPRPASTQCEPKTNCNCL 80 G C++ + C C + P +PA C C+CL Sbjct: 47 GDCLNQAICKCSCEVDPAKPAKNACSKSERCDCL 80
>tr|A7S219|A7S219_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g101593 PE=4 SV=1 Length = 231
Score = 33.5 bits (75), Expect = 6.5 Identities = 19/60 (31%), Positives = 24/60 (40%) Frame = +3
Query: 84 QLQLVLGSHWVDAGLGGDMWQIQAVVD*WTQWPVHRHHNSEIDVAGCQGYFVSHWLLFRV 263 Q+ V GS W G WQ+ A +QW V H S+ V G S W + V Sbjct: 129 QVMAVHGSQWQVMAAHGSQWQVMAAHG--SQWQVMAVHGSQWQVMAVHGIHGSQWQVMAV 186
>tr|A4F3R7|A4F3R7_9METZ Secreted frizzled related protein OS=Lubomirskia baicalensis GN=sfrp PE=2 SV=1 Length = 335
Score = 33.5 bits (75), Expect = 6.5 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -3
Query: 210 LSPNCGGGELATVSINPPPLVSATC---HRPDQHPPNVNPRPTVTACPLQ 70 +S N GG AT + +PPP AT P PP +P P AC LQ Sbjct: 153 VSRNGGGCINATFASSPPPSTPATTAVSSSPAPTPPTTSPAPACGACSLQ 202
>tr|B0T714|B0T714_CAUSK Putative uncharacterized protein OS=Caulobacter sp. (strain K31) GN=Caul_3525 PE=4 SV=1 Length = 359
Score = 33.1 bits (74), Expect = 8.5 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +2
Query: 113 GGCWSGR*HVADTSGGGLMD---TVASSPPPQFGDRRSWLS 226 G CW R ++ D GG+ VA+ PPPQ GD +WL+ Sbjct: 279 GSCWD-RLYLLDPPTGGIFPMAVNVATHPPPQPGDSGAWLA 318
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