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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919615
Clone id YMU001_000127_B10
Library
Length 475
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTATCAGCAATGACCAGCCTGTTTTTCAGTTTCTATACTTTTCCATTTCCC
CACAAGTTACTTACAATTTCGCCAAAGGGGTCGTAAAAGGGCAAGTGTAGCAAGCACAGA
GATGGATCATTCCAAGTGAAATAGGGCTCTTGACTCTTGATAAAACTAAAGCCACGTGCC
CGGACATGTACGGCCTTGTAAAATTGTACATGACCTGGATTGAGTATCACCATCCTTCAT
AATTTGCATCATGTACTGCTTGGTATTTGCTCATAATCGGTATCGTCCTCCTCATCTGTC
TCATCATGATCCAGGTGATTGGGATTCCGTTCCAAGGGTGGTAAACCATCATCATCATCA
ACCTCGTCCTCGTCCTCATCTTTGCCTGTGAGATCTTCGCTTATATGCATCTTCTTCATT
TTGGCAGGTACAAGGTTGTCGTTAAGCAAACCAGTCACACCAGGAGATTCTAGTG
■■Homology search results ■■ -
sp_hit_id Q6CV83
Definition sp|Q6CV83|XPOT_KLULA Exportin-T OS=Kluyveromyces lactis
Align length 41
Score (bit) 30.0
E-value 5.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919615|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_B10.
         (464 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6CV83|XPOT_KLULA Exportin-T OS=Kluyveromyces lactis GN=LOS1 ...    30   5.1  

>sp|Q6CV83|XPOT_KLULA Exportin-T OS=Kluyveromyces lactis GN=LOS1
           PE=3 SV=1
          Length = 1063

 Score = 30.0 bits (66), Expect = 5.1
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -3

Query: 165 RGFSFIKSQEPYFTWNDPSLCLLHLPFYDPFGEIVSNLWGN 43
           +G   +KS  P F  N  +    HL FY+ +GE+ +N+W +
Sbjct: 106 QGSKGVKSTPPEFVRNKVAELFAHL-FYNMYGEVNNNMWSS 145
tr_hit_id Q9LFE7
Definition tr|Q9LFE7|Q9LFE7_ARATH Putative uncharacterized protein F5E19_40 OS=Arabidopsis thaliana
Align length 30
Score (bit) 32.7
E-value 9.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919615|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_B10.
         (464 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9LFE7|Q9LFE7_ARATH Putative uncharacterized protein F5E19_40...    33   9.1  

>tr|Q9LFE7|Q9LFE7_ARATH Putative uncharacterized protein F5E19_40
           OS=Arabidopsis thaliana GN=F5E19_40 PE=4 SV=1
          Length = 488

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 16/30 (53%), Positives = 20/30 (66%)
 Frame = -3

Query: 102 LLHLPFYDPFGEIVSNLWGNGKV*KLKNRL 13
           LLHLP ++ F E+VSNL  NG +  L N L
Sbjct: 123 LLHLPLFNAFQEVVSNLGENGVMVILDNHL 152