BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919616|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_B11.
         (468 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q32PH0|TPPC9_BOVIN Trafficking protein particle complex subun...    35   0.21 
sp|Q66GP4|PP379_ARATH Pentatricopeptide repeat-containing protei...    32   1.4  

>sp|Q32PH0|TPPC9_BOVIN Trafficking protein particle complex subunit 9
            OS=Bos taurus GN=TRAPPC9 PE=2 SV=1
          Length = 1138

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 13/43 (30%), Positives = 25/43 (58%)
 Frame = +2

Query: 167  QMVFDHVKIAPECWEHNLEGQQCGAQSSTCSFQRRVSCTIKCT 295
            Q+V +H+++AP  W+  ++GQ C  Q++ C     V   ++ T
Sbjct: 996  QLVLEHLQLAPLLWDVLVDGQPCDCQAAACRVGDPVRLEVRLT 1038


>sp|Q66GP4|PP379_ARATH Pentatricopeptide repeat-containing protein
           At5g13770, chloroplastic OS=Arabidopsis thaliana
           GN=At5g13770 PE=2 SV=1
          Length = 609

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +1

Query: 7   DAQKAGVQIDRRMYRTILNAFLDANLPEKVNWFE 108
           D +  G ++D R+Y + LNA  DA L  ++ W +
Sbjct: 553 DMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQ 586

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919616|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_B11.
         (468 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PH93|A9PH93_POPTR Putative uncharacterized protein OS=Popul...    33   5.5  
tr|B5YDC1|B5YDC1_DICT6 Putative uncharacterized protein OS=Dicty...    33   9.4  

>tr|A9PH93|A9PH93_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 184

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 7   DAQKAGVQIDRRMYRTILNAFLDANLPEKVNWFENFMKS 123
           D +  G  ID R+YR+  NA  DA L  +  W ++  K+
Sbjct: 145 DMKSEGTPIDERLYRSATNAMRDAGLDIQAKWLQDSFKA 183


>tr|B5YDC1|B5YDC1_DICT6 Putative uncharacterized protein
           OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM
           3960 / H-6-12) GN=DICTH_0656 PE=4 SV=1
          Length = 999

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
 Frame = -2

Query: 182 GRKPFAFTQ-SFSVNSRGNHHDFIKFSNQFTFSGRLASRKAFNIVLYIRRS 33
           G+  F+++   F V  R N  D IKFS  F F+G L+S   +N+ +Y++ S
Sbjct: 2   GKGKFSYSNFKFDVKGRINWQDQIKFSPYFLFTGDLSS---WNLEIYLKNS 49