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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919627
Clone id YMU001_000127_C11
Library
Length 446
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GACCTTCTCGAGCCCCGTACAAATTTTCTATGTACTAAAATCGAAGAAGACCATATCCTA
ATACCAAAACCTCATCAGCTTGTCCATAAGTTTCCTCACACATAACATGTGCCAGCTCTT
GAATTGTTATTTACTCCTCCCAAAAACACTTCCTTTGGCATGTATCCTTCATCTGAATGT
GACCGAATCATCTTTCAATCTTCCTCCTTTGCATGCAGCATGGCCTCCATTTTGAACAAA
TGATGAAGTTTCCTGTCTTCCATGCGTTTCAAAACACAAGCTCGATAAGCTTCCCATTCT
TGTAAGCACTCATCCTTTTCCCATTGTCCTTTAAGAAATTTCTCAGCATACCACTTGTTG
AAACATTCGTTGTAAGCTGTGTTGAGAGCAGAGCAAGGCGAGCTGCTAGCAAGCTTAGAC
TTGTCTTTCATGGCGAGTACCTGCAG
■■Homology search results ■■ -
sp_hit_id Q9SMZ9
Definition sp|Q9SMZ9|Y4331_ARATH Uncharacterized protein At4g33100 OS=Arabidopsis thaliana
Align length 81
Score (bit) 84.0
E-value 3.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919627|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_C11.
         (446 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9SMZ9|Y4331_ARATH Uncharacterized protein At4g33100 OS=Arabi...    84   3e-16
sp|O60200|MDM35_YEAST Mitochondrial distribution and morphology ...    60   5e-09
sp|Q9D8Z2|TRIA1_MOUSE TP53-regulated inhibitor of apoptosis 1 OS...    57   4e-08
sp|O43715|TRIA1_HUMAN TP53-regulated inhibitor of apoptosis 1 OS...    57   5e-08
sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18 OS=Schizosa...    54   4e-07
sp|Q8CHS8|VP37A_MOUSE Vacuolar protein sorting-associated protei...    34   0.24 
sp|Q54P46|NDUA8_DICDI NADH dehydrogenase [ubiquinone] 1 alpha su...    32   1.2  
sp|Q6GMI7|ENOPH_DANRE Enolase-phosphatase E1 OS=Danio rerio GN=e...    32   1.2  
sp|Q5F3F2|MYSM1_CHICK Protein MYSM1 OS=Gallus gallus GN=MYSM1 PE...    31   2.1  
sp|Q6UWN0|LYPD4_HUMAN Ly6/PLAUR domain-containing protein 4 OS=H...    30   3.5  
sp|P16141|CP52D_CANMA Cytochrome P450 52A4 OS=Candida maltosa GN...    30   3.5  
sp|A8E4S7|CA161_DANRE Uncharacterized protein C1orf161 homolog O...    30   6.0  
sp|A2AMZ4|CQ089_MOUSE Uncharacterized protein C17orf89 homolog O...    29   7.8  

>sp|Q9SMZ9|Y4331_ARATH Uncharacterized protein At4g33100
           OS=Arabidopsis thaliana GN=At4g33100 PE=2 SV=1
          Length = 92

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 34/81 (41%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
 Frame = -1

Query: 440 VLAMKDKSKLASS-SPCSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLKR 264
           +L  KD +   SS SPC+ L  AY+ CFNKWY+EKF+KGQW+K+EC+ EW+ YR C+ + 
Sbjct: 3   LLKKKDSTSARSSTSPCADLRNAYHNCFNKWYSEKFVKGQWDKEECVAEWKKYRDCLSEN 62

Query: 263 MEDRKLHHLFKMEAMLHAKEE 201
           ++ + L  + +++  L+  ++
Sbjct: 63  LDGKLLTRILEVDGELNPTKQ 83


>sp|O60200|MDM35_YEAST Mitochondrial distribution and morphology
           protein 35 OS=Saccharomyces cerevisiae GN=MDM35 PE=1
           SV=3
          Length = 86

 Score = 59.7 bits (143), Expect = 5e-09
 Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = -1

Query: 410 ASSSP-CSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACV 273
           AS +P C+ L T Y+ CFN+WY+EKFLKG+  ++EC ++W AY  CV
Sbjct: 7   ASFAPECTDLKTKYDSCFNEWYSEKFLKGKSVENECSKQWYAYTTCV 53


>sp|Q9D8Z2|TRIA1_MOUSE TP53-regulated inhibitor of apoptosis 1
           OS=Mus musculus GN=Triap1 PE=2 SV=1
          Length = 76

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 24/65 (36%), Positives = 42/65 (64%)
 Frame = -1

Query: 395 CSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLKRMEDRKLHHLFKMEAML 216
           C+ +   Y++CFN+W+AEKFLKG    D C   ++ Y+ CV K ++++++  +  +E M 
Sbjct: 8   CTDMKREYDQCFNRWFAEKFLKGDGSGDPCTDLFKRYQQCVQKAIKEKEI-PIEGLEFMG 66

Query: 215 HAKEE 201
           H KE+
Sbjct: 67  HGKEK 71


>sp|O43715|TRIA1_HUMAN TP53-regulated inhibitor of apoptosis 1
           OS=Homo sapiens GN=TRIAP1 PE=1 SV=1
          Length = 76

 Score = 56.6 bits (135), Expect = 5e-08
 Identities = 24/65 (36%), Positives = 42/65 (64%)
 Frame = -1

Query: 395 CSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLKRMEDRKLHHLFKMEAML 216
           C+ +   Y++CFN+W+AEKFLKG    D C   ++ Y+ CV K ++++++  +  +E M 
Sbjct: 8   CTDMKREYDQCFNRWFAEKFLKGDSSGDPCTDLFKRYQQCVQKAIKEKEI-PIEGLEFMG 66

Query: 215 HAKEE 201
           H KE+
Sbjct: 67  HGKEK 71


>sp|Q96VG1|YBAI_SCHPO Uncharacterized protein C119.18
           OS=Schizosaccharomyces pombe GN=SPBC119.18 PE=2 SV=1
          Length = 69

 Score = 53.5 bits (127), Expect = 4e-07
 Identities = 24/69 (34%), Positives = 39/69 (56%)
 Frame = -1

Query: 404 SSPCSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLKRMEDRKLHHLFKME 225
           S  C+     Y+ CFN WYA KFLKG     +C + +  Y++C+LK ++ +K+  L +  
Sbjct: 6   SEECTPAKKKYDACFNDWYANKFLKGDLHNRDCDELFAEYKSCLLKALKTKKIDPLLEA- 64

Query: 224 AMLHAKEED 198
               A++ED
Sbjct: 65  ----ARKED 69


>sp|Q8CHS8|VP37A_MOUSE Vacuolar protein sorting-associated protein
           37A OS=Mus musculus GN=Vps37a PE=2 SV=1
          Length = 397

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 347 AEKFLKGQWEKDECLQEWEAYRA-CVLKRMEDRKLHHLFKMEAMLHA 210
           AE FL+G+ E D+ L  ++  R  C  +R ++ KLH +  M +  HA
Sbjct: 349 AEDFLEGKTEIDDFLNSFKEKRTICHCRRAKEEKLHQVIAMHSQFHA 395


>sp|Q54P46|NDUA8_DICDI NADH dehydrogenase [ubiquinone] 1 alpha
           subcomplex subunit 8 OS=Dictyostelium discoideum
           GN=ndufa8 PE=3 SV=1
          Length = 104

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 398 PCSALNTAYNECFNKWYAEKFL 333
           PC   N A+NECF+K  A KFL
Sbjct: 83  PCEEENKAFNECFDKLVAPKFL 104


>sp|Q6GMI7|ENOPH_DANRE Enolase-phosphatase E1 OS=Danio rerio
           GN=enoph1 PE=2 SV=1
          Length = 261

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 13/48 (27%), Positives = 23/48 (47%)
 Frame = -1

Query: 344 EKFLKGQWEKDECLQEWEAYRACVLKRMEDRKLHHLFKMEAMLHAKEE 201
           E +L   WE+DEC Q+    +    + +   K  H+  ++  +H  EE
Sbjct: 40  EDYLSAHWEEDECKQDVHLLKKQTEEDLRQNKACHVHTVDQTVHTDEE 87


>sp|Q5F3F2|MYSM1_CHICK Protein MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
           SV=1
          Length = 832

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +1

Query: 85  HKFPHT*HVPALELLFTPPKNTSFGMYPSSECDRIIFQSSSFACS 219
           H FPH  H  A+ LL   P+NT          D ++FQ  +  CS
Sbjct: 262 HPFPHVGHSSAVSLLKEDPQNTK-----QPTVDALLFQDGAATCS 301


>sp|Q6UWN0|LYPD4_HUMAN Ly6/PLAUR domain-containing protein 4 OS=Homo
           sapiens GN=LYPD4 PE=2 SV=2
          Length = 246

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +2

Query: 197 NLPP---LHAAWPPF*TNDEVSCLPCVSKHKLDKLPILVSTHPFPI 325
           NL P   L A+ P   T+   SC  CV +H  D LP  V+T+  P+
Sbjct: 120 NLEPFVKLKASTPKSITSASCSCPTCVGEHMKDCLPNFVTTNSCPL 165
tr_hit_id A9NS30
Definition tr|A9NS30|A9NS30_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 70
Score (bit) 99.8
E-value 6.0e-20
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919627|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_C11.
         (446 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NS30|A9NS30_PICSI Putative uncharacterized protein OS=Picea...   100   6e-20
tr|Q6K4F7|Q6K4F7_ORYSJ Os09g0361700 protein OS=Oryza sativa subs...    84   3e-15
tr|B8BET3|B8BET3_ORYSI Putative uncharacterized protein OS=Oryza...    84   3e-15
tr|B6T9F6|B6T9F6_MAIZE Putative uncharacterized protein OS=Zea m...    81   3e-14
tr|A3BY16|A3BY16_ORYSJ Putative uncharacterized protein OS=Oryza...    78   2e-13
tr|B7F1Z9|B7F1Z9_ORYSJ cDNA clone:002-156-G05, full insert seque...    77   4e-13
tr|B3LR37|B3LR37_YEAS1 Mitochondrial distribution and morphology...    60   7e-08
tr|A6ZZR3|A6ZZR3_YEAS7 Mitochondrial distribution and morphology...    60   7e-08
tr|A7TMD7|A7TMD7_VANPO Putative uncharacterized protein OS=Vande...    58   3e-07
tr|A9ULB4|A9ULB4_XENTR TP53 regulated inhibitor of apoptosis 1 O...    57   5e-07
tr|Q0P5E1|Q0P5E1_BOVIN TP53 regulated inhibitor of apoptosis 1 O...    57   5e-07
tr|Q5AMH0|Q5AMH0_CANAL Putative uncharacterized protein OS=Candi...    57   5e-07
tr|Q6DD38|Q6DD38_XENLA MGC80384 protein OS=Xenopus laevis GN=MGC...    57   6e-07
tr|B2R4Z7|B2R4Z7_HUMAN cDNA, FLJ92280 (TP53 regulated inhibitor ...    57   6e-07
tr|Q75DS2|Q75DS2_ASHGO ABR078Cp OS=Ashbya gossypii GN=ABR078C PE...    57   6e-07
tr|Q6INR6|Q6INR6_XENLA MGC81190 protein OS=Xenopus laevis GN=MGC...    56   1e-06
tr|Q6FIN3|Q6FIN3_CANGA Similarity OS=Candida glabrata GN=CAGL0M1...    56   1e-06
tr|B8LUP7|B8LUP7_9EURO Mitochondrial distribution and morphology...    55   1e-06
tr|Q6BR98|Q6BR98_DEBHA DEHA2D18062p OS=Debaryomyces hansenii GN=...    55   2e-06
tr|Q6CTH7|Q6CTH7_KLULA KLLA0C12639p OS=Kluyveromyces lactis GN=K...    55   2e-06
tr|Q4SB74|Q4SB74_TETNG Chromosome undetermined SCAF14677, whole ...    54   3e-06
tr|B5XC94|B5XC94_SALSA TP53-regulated inhibitor of apoptosis 1 O...    54   3e-06
tr|B6P5N5|B6P5N5_BRAFL Putative uncharacterized protein (Fragmen...    54   3e-06
tr|A6R752|A6R752_AJECN Predicted protein OS=Ajellomyces capsulat...    54   3e-06
tr|B2VXT4|B2VXT4_PYRTR Putative uncharacterized protein OS=Pyren...    54   4e-06
tr|A3GG82|A3GG82_PICST Mitochondrial Distribution and Morphology...    54   5e-06
tr|A5E424|A5E424_LODEL Mitochondrial distribution and morphology...    53   7e-06
tr|B3MIF0|B3MIF0_DROAN GF11660 OS=Drosophila ananassae GN=GF1166...    53   9e-06
tr|A6SCE6|A6SCE6_BOTFB Predicted protein OS=Botryotinia fuckelia...    52   1e-05
tr|A7SVU1|A7SVU1_NEMVE Predicted protein OS=Nematostella vectens...    52   1e-05

>tr|A9NS30|A9NS30_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 88

 Score = 99.8 bits (247), Expect = 6e-20
 Identities = 39/70 (55%), Positives = 55/70 (78%)
 Frame = -1

Query: 407 SSSPCSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLKRMEDRKLHHLFKM 228
           ++S CS L T YN+CFN+WY EK+LKGQWEK+EC  E EAYRAC++K MED+ L  L + 
Sbjct: 7   NASACSRLRTVYNDCFNRWYTEKYLKGQWEKEECKYELEAYRACIMKHMEDKNLSRLLQA 66

Query: 227 EAMLHAKEED 198
           EA++ ++++D
Sbjct: 67  EALMQSRQDD 76


>tr|Q6K4F7|Q6K4F7_ORYSJ Os09g0361700 protein OS=Oryza sativa subsp.
           japonica GN=OJ1506_A04.1-1 PE=4 SV=1
          Length = 108

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 32/58 (55%), Positives = 44/58 (75%)
 Frame = -1

Query: 410 ASSSPCSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLKRMEDRKLHHL 237
           A+++ CS L  AY+ECFN+WYAEKF KGQW KD+C+ EW  YRAC+ + +ED+ L  +
Sbjct: 24  AAAAACSELRAAYHECFNRWYAEKFAKGQWHKDDCVGEWHKYRACLEEHLEDKNLRQI 81


>tr|B8BET3|B8BET3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31056 PE=4 SV=1
          Length = 108

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 32/58 (55%), Positives = 44/58 (75%)
 Frame = -1

Query: 410 ASSSPCSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLKRMEDRKLHHL 237
           A+++ CS L  AY+ECFN+WYAEKF KGQW KD+C+ EW  YRAC+ + +ED+ L  +
Sbjct: 24  AAAAACSELRAAYHECFNRWYAEKFAKGQWHKDDCVGEWHKYRACLEEHLEDKNLRQI 81


>tr|B6T9F6|B6T9F6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=4 SV=1
          Length = 101

 Score = 80.9 bits (198), Expect = 3e-14
 Identities = 29/57 (50%), Positives = 43/57 (75%)
 Frame = -1

Query: 407 SSSPCSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLKRMEDRKLHHL 237
           +++ CS L TAY++CFN+WYAEKF KGQW++D+C   W  YRAC+ + +ED+ L  +
Sbjct: 20  AAAACSELRTAYHDCFNRWYAEKFAKGQWQRDDCADHWHKYRACLEEHLEDKHLRQI 76


>tr|A3BY16|A3BY16_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_027938 PE=4 SV=1
          Length = 273

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 30/48 (62%), Positives = 38/48 (79%)
 Frame = -1

Query: 410 ASSSPCSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLK 267
           A+++ CS L  AY+ECFN+WYAEKF KGQW KD+C+ EW  YRAC+ K
Sbjct: 81  AAAAACSELRAAYHECFNRWYAEKFAKGQWHKDDCVGEWHKYRACLEK 128


>tr|B7F1Z9|B7F1Z9_ORYSJ cDNA clone:002-156-G05, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 129

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 29/46 (63%), Positives = 37/46 (80%)
 Frame = -1

Query: 410 ASSSPCSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACV 273
           A+++ CS L  AY+ECFN+WYAEKF KGQW KD+C+ EW  YRAC+
Sbjct: 24  AAAAACSELRAAYHECFNRWYAEKFAKGQWHKDDCVGEWHKYRACL 69


>tr|B3LR37|B3LR37_YEAS1 Mitochondrial distribution and morphology
           protein 35 OS=Saccharomyces cerevisiae (strain RM11-1a)
           GN=SCRG_03967 PE=4 SV=1
          Length = 86

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = -1

Query: 410 ASSSP-CSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACV 273
           AS +P C+ L T Y+ CFN+WY+EKFLKG+  ++EC ++W AY  CV
Sbjct: 7   ASFAPECTDLKTKYDSCFNEWYSEKFLKGKSVENECSKQWYAYTTCV 53


>tr|A6ZZR3|A6ZZR3_YEAS7 Mitochondrial distribution and morphology
           OS=Saccharomyces cerevisiae (strain YJM789) GN=MDM35
           PE=4 SV=1
          Length = 86

 Score = 59.7 bits (143), Expect = 7e-08
 Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = -1

Query: 410 ASSSP-CSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACV 273
           AS +P C+ L T Y+ CFN+WY+EKFLKG+  ++EC ++W AY  CV
Sbjct: 7   ASFAPECTDLKTKYDSCFNEWYSEKFLKGKSVENECSKQWYAYTTCV 53


>tr|A7TMD7|A7TMD7_VANPO Putative uncharacterized protein
           OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=Kpol_1064p12 PE=4 SV=1
          Length = 88

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
 Frame = -1

Query: 410 ASSSP-CSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACV 273
           AS +P C+ L   Y+ CFN+WY+EKFLKG+  ++EC ++W AY +CV
Sbjct: 7   ASFAPECTELKKEYDNCFNEWYSEKFLKGKSIENECSKQWYAYTSCV 53


>tr|A9ULB4|A9ULB4_XENTR TP53 regulated inhibitor of apoptosis 1
           OS=Xenopus tropicalis GN=triap1 PE=4 SV=1
          Length = 78

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 21/50 (42%), Positives = 34/50 (68%)
 Frame = -1

Query: 395 CSALNTAYNECFNKWYAEKFLKGQWEKDECLQEWEAYRACVLKRMEDRKL 246
           C+ +   Y++CFN+W+AEKFLKG+   D C + +  YR CV K ++D+ +
Sbjct: 8   CTDMKREYDQCFNRWFAEKFLKGECSGDPCTELFRRYRDCVQKAIKDKDI 57