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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919629
Clone id YMU001_000127_D01
Library
Length 521
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_D01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CCACTGATGTCAATTGCTTTTTTGAAATTCAGAGGTGAATGTCATCCTCAAAACACTTCT
TGATAAATGTGCTTATTTTCAAAGCTTGGAATTTCCTTAGATGTACATTGAGAACATCTG
CAGGCACCAGCCGCAGGATAGGATGAGTTAAAGTACACTGATAGGCTTCAATCTACCAGG
AAAGTGGTCACAACCCTCCCCAAAGAGACCATTGAACAGCAGCTCGAAGAGCCTGCAAAA
GGAGAAAGGAACCAGCCTGTTCCAATGTAAAGGACCCACCTTCAGACACGTCGATCATTG
TACAAGCCAACCGAGGTTCGCTAGTACACATCATTTTTGTGTTGCAATAGTCTCACCACA
TGCTGTAAGTCCCCCACAACGATTTGCAACTGTATGCCCTTCTTGGCTGAAGAAATCAAC
TCATAATTGACCTCAGCTCTTCTGTTGCAGATAGCAGCTCTTGAGTAATGCCCTTCTCAT
ACATGGAATGCCCTGCATCCATTACTAGAGCCAACCAACAT
■■Homology search results ■■ -
sp_hit_id P81014
Definition sp|P81014|GRN2_CYPCA Granulin-2 OS=Cyprinus carpio
Align length 21
Score (bit) 31.6
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919629|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_D01.
         (521 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P81014|GRN2_CYPCA Granulin-2 OS=Cyprinus carpio PE=1 SV=1           32   2.4  
sp|P81015|GRN3_CYPCA Granulin-3 OS=Cyprinus carpio PE=1 SV=1           31   3.1  
sp|O83041|PIP_PLEBO Probable proline iminopeptidase OS=Plectonem...    30   5.3  
sp|Q96JK9|MAML3_HUMAN Mastermind-like protein 3 OS=Homo sapiens ...    30   5.3  
sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protei...    30   6.9  

>sp|P81014|GRN2_CYPCA Granulin-2 OS=Cyprinus carpio PE=1 SV=1
          Length = 57

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 343 CNSLTTCCKSPTTICNCMPFL 405
           C S TTCC+SP  +  C PFL
Sbjct: 10  CPSRTTCCRSPFGVWYCCPFL 30


>sp|P81015|GRN3_CYPCA Granulin-3 OS=Cyprinus carpio PE=1 SV=1
          Length = 57

 Score = 31.2 bits (69), Expect = 3.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = +1

Query: 337 LCCNSLTTCCKSPTTICNCMPFL 405
           + C S TTCC+SP  +  C PFL
Sbjct: 8   ITCPSGTTCCRSPFGVWYCCPFL 30


>sp|O83041|PIP_PLEBO Probable proline iminopeptidase OS=Plectonema
           boryanum GN=pip PE=3 SV=1
          Length = 321

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 514 LALVMDAGHSMYEKGITQELLSATE 440
           L +V DAGHSM E GI   L+ AT+
Sbjct: 286 LIVVPDAGHSMMEAGILSALIDATD 310


>sp|Q96JK9|MAML3_HUMAN Mastermind-like protein 3 OS=Homo sapiens
           GN=MAML3 PE=1 SV=3
          Length = 1134

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 12/85 (14%)
 Frame = +2

Query: 182 KWSQPSPKRPLNSSSKSLQKEKGTSLF------------QCKGPTFRHVDHCTSQPRFAS 325
           ++SQP+ + PL+  S S++ +   S F               GP F  V   TS P  AS
Sbjct: 340 EFSQPATETPLSQESASVKSDPSHSPFAHVSMGSPQARPSSSGPPFSTVSTATSLPSVAS 399

Query: 326 THHFCVAIVSPHAVSPPQRFATVCP 400
           T        +P+  S P   A   P
Sbjct: 400 TP------AAPNPASSPANCAVQSP 418


>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein
           At2g41080 OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
          Length = 650

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
 Frame = +2

Query: 41  VILKTLLDKCAYFQSLEFP*MYIENICRHQPQDRMS*STLIGFNLPGK-WSQPSPKRPLN 217
           VI KTLL  C   ++ E      + I +  P D      L   +   K W   S  R  +
Sbjct: 448 VIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRK-S 506

Query: 218 SSSKSLQKEKGTSLFQCKG 274
              K+++KE G S F+ KG
Sbjct: 507 MRDKNVKKEAGISWFEHKG 525
tr_hit_id Q7TUE6
Definition tr|Q7TUE6|Q7TUE6_PROMP Proline iminopeptidase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1378 / MED4)
Align length 29
Score (bit) 36.6
E-value 0.77
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919629|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_D01.
         (521 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7TUE6|Q7TUE6_PROMP Proline iminopeptidase OS=Prochlorococcus...    37   0.77 
tr|A3PB88|A3PB88_PROM0 Proline iminopeptidase OS=Prochlorococcus...    36   1.00 
tr|Q0AE77|Q0AE77_NITEC Proline iminopeptidase OS=Nitrosomonas eu...    35   1.7  
tr|Q2BHY1|Q2BHY1_9GAMM Proline iminopeptidase OS=Neptuniibacter ...    35   2.9  
tr|Q82SM0|Q82SM0_NITEU Proline iminopeptidase OS=Nitrosomonas eu...    34   3.8  
tr|B4FQC9|B4FQC9_MAIZE Putative uncharacterized protein OS=Zea m...    34   3.8  
tr|B4F869|B4F869_MAIZE Putative uncharacterized protein OS=Zea m...    34   3.8  
tr|A8G328|A8G328_PROM2 Proline iminopeptidase OS=Prochlorococcus...    34   5.0  
tr|Q31CH4|Q31CH4_PROM9 Proline iminopeptidase OS=Prochlorococcus...    33   6.5  
tr|A6FYJ4|A6FYJ4_9DELT Proline iminopeptidase OS=Plesiocystis pa...    33   6.5  
tr|B3RT62|B3RT62_TRIAD Putative uncharacterized protein OS=Trich...    33   6.5  
tr|A8U031|A8U031_9PROT Proline iminopeptidase OS=alpha proteobac...    33   8.5  
tr|A3JMC7|A3JMC7_9RHOB Proline iminopeptidase OS=Rhodobacterales...    33   8.5  
tr|B4JRR8|B4JRR8_DROGR GH19633 OS=Drosophila grimshawi GN=GH1963...    33   8.5  

>tr|Q7TUE6|Q7TUE6_PROMP Proline iminopeptidase OS=Prochlorococcus
           marinus subsp. pastoris (strain CCMP1378 / MED4)
           GN=PMM0356 PE=3 SV=1
          Length = 315

 Score = 36.6 bits (83), Expect = 0.77
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -2

Query: 514 LALVMDAGHSMYEKGITQELLSATEELRS 428
           L +V DAGHSM EKGIT +LL + E L S
Sbjct: 286 LIIVDDAGHSMSEKGITLKLLDSVERLES 314


>tr|A3PB88|A3PB88_PROM0 Proline iminopeptidase OS=Prochlorococcus
           marinus (strain MIT 9301) GN=P9301_03901 PE=3 SV=1
          Length = 316

 Score = 36.2 bits (82), Expect = 1.00
 Identities = 16/30 (53%), Positives = 24/30 (80%)
 Frame = -2

Query: 514 LALVMDAGHSMYEKGITQELLSATEELRSI 425
           L +V DAGHSM EKGIT+EL+ A + ++++
Sbjct: 287 LIIVDDAGHSMSEKGITKELIKAIKGIQNL 316


>tr|Q0AE77|Q0AE77_NITEC Proline iminopeptidase OS=Nitrosomonas
           eutropha (strain C91) GN=Neut_2133 PE=3 SV=1
          Length = 316

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -2

Query: 508 LVMDAGHSMYEKGITQELLSATEELRSIM 422
           +V DAGHS +E GI  EL+ ATE+ R I+
Sbjct: 288 VVNDAGHSAWELGIQAELIKATEKFRQIL 316


>tr|Q2BHY1|Q2BHY1_9GAMM Proline iminopeptidase OS=Neptuniibacter
           caesariensis GN=MED92_00640 PE=3 SV=1
          Length = 327

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 15/25 (60%), Positives = 19/25 (76%)
 Frame = -2

Query: 514 LALVMDAGHSMYEKGITQELLSATE 440
           L +V DAGHS +EKGIT  L+ AT+
Sbjct: 296 LHIVRDAGHSAFEKGITDNLIRATD 320


>tr|Q82SM0|Q82SM0_NITEU Proline iminopeptidase OS=Nitrosomonas
           europaea GN=NE2295 PE=3 SV=1
          Length = 335

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = -2

Query: 508 LVMDAGHSMYEKGITQELLSATEELRSIM 422
           +V DAGHS +E GI  EL+ ATE+L+ I+
Sbjct: 307 VVNDAGHSAWEPGILIELVKATEKLKLIL 335


>tr|B4FQC9|B4FQC9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 322

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -2

Query: 508 LVMDAGHSMYEKGITQELLSATEELRSIM 422
           +V DAGHS  E GI  EL SAT++LR ++
Sbjct: 292 VVADAGHSANEVGIAAELRSATDKLRDLL 320


>tr|B4F869|B4F869_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 369

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -2

Query: 508 LVMDAGHSMYEKGITQELLSATEELRSIM 422
           +V DAGHS  E GI  EL SAT++LR ++
Sbjct: 339 VVADAGHSANEVGIAAELRSATDKLRDLL 367


>tr|A8G328|A8G328_PROM2 Proline iminopeptidase OS=Prochlorococcus
           marinus (strain MIT 9215) GN=P9215_03931 PE=3 SV=1
          Length = 313

 Score = 33.9 bits (76), Expect = 5.0
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = -2

Query: 514 LALVMDAGHSMYEKGITQELLSATEEL 434
           L +V DAGHSM EKGIT +L+ A ++L
Sbjct: 287 LIIVDDAGHSMSEKGITIKLIQALKDL 313


>tr|Q31CH4|Q31CH4_PROM9 Proline iminopeptidase OS=Prochlorococcus
           marinus (strain MIT 9312) GN=PMT9312_0360 PE=3 SV=1
          Length = 316

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = -2

Query: 514 LALVMDAGHSMYEKGITQELLSATEELRSI 425
           L +V DAGHSM EKGI+ EL+ A + + ++
Sbjct: 287 LIIVNDAGHSMSEKGISIELIKAVKGIENL 316


>tr|A6FYJ4|A6FYJ4_9DELT Proline iminopeptidase OS=Plesiocystis
           pacifica SIR-1 GN=PPSIR1_40320 PE=3 SV=1
          Length = 316

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -2

Query: 514 LALVMDAGHSMYEKGITQELLSATEELR 431
           L +V DAGHS +E GI   L+ AT+E R
Sbjct: 289 LVIVPDAGHSAFEPGIISALVEATDEYR 316