BP919632
Clone id YMU001_000127_D04
Library
Length 376
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGTACCTGCGCTTTTGTTTCGATGGTGCATGGTGCGTGTGTTATACACATATATACATA
CACATACACATGCATAAATACATGTGCTAGACATGAACATAAAACACATATGTATACATG
CCCATGCATACATACATGTGTGCAAGTAGGGGTTACCAGCTTGGGTAAAATCGATAAAAT
AAGAAAATCTGAGTTGATGCGAGGAGGTCAATTTAACAGGGAAAGGGTCGTGAGGGGTCC
CGCTCATTGAAGCACTGGACAAACCAAGAACGGCTGCGAGACACCCGTCAAGGCAGGAGA
CAGACGAGCAGAGTTTGCGATTCTCAGTTGATTGTCAAGTGCACAAACCATGCTCAGGAT
ATTTCTTTTTAATATA
■■Homology search results ■■ -
sp_hit_id P24786
Definition sp|P24786|NTRK3_PIG NT-3 growth factor receptor OS=Sus scrofa
Align length 46
Score (bit) 32.0
E-value 0.97
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919632|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_D04.
(376 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P24786|NTRK3_PIG NT-3 growth factor receptor OS=Sus scrofa GN... 32 0.97
sp|Q5IS82|NTRK3_SAIBB NT-3 growth factor receptor OS=Saimiri bol... 30 4.8
sp|Q5IS37|NTRK3_PANTR NT-3 growth factor receptor OS=Pan troglod... 30 4.8
sp|Q5IFJ9|NTRK3_MACFA NT-3 growth factor receptor OS=Macaca fasc... 30 4.8
sp|Q16288|NTRK3_HUMAN NT-3 growth factor receptor OS=Homo sapien... 30 4.8

>sp|P24786|NTRK3_PIG NT-3 growth factor receptor OS=Sus scrofa
GN=NTRK3 PE=2 SV=1
Length = 825

Score = 32.0 bits (71), Expect = 0.97
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1

Query: 283 CLAA-VLGLSSASMSGTPHDPFPVKLTSSHQLRFSYFIDFTQAGNP 149
C+A V+G+S+AS++ T H P V +LR + I+F GNP
Sbjct: 284 CIAENVVGMSNASVALTVHYPPRVVSLEEPELRLEHCIEFVVRGNP 329


>sp|Q5IS82|NTRK3_SAIBB NT-3 growth factor receptor OS=Saimiri
boliviensis boliviensis GN=NTRK3 PE=2 SV=1
Length = 825

Score = 29.6 bits (65), Expect = 4.8
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1

Query: 283 CLAA-VLGLSSASMSGTPHDPFPVKLTSSHQLRFSYFIDFTQAGNP 149
C+A V+G+S+AS++ T + P V +LR + I+F GNP
Sbjct: 284 CIAENVVGMSNASVALTVYYPPRVVSLEEPELRLEHCIEFVVRGNP 329


>sp|Q5IS37|NTRK3_PANTR NT-3 growth factor receptor OS=Pan
troglodytes GN=NTRK3 PE=2 SV=1
Length = 825

Score = 29.6 bits (65), Expect = 4.8
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1

Query: 283 CLAA-VLGLSSASMSGTPHDPFPVKLTSSHQLRFSYFIDFTQAGNP 149
C+A V+G+S+AS++ T + P V +LR + I+F GNP
Sbjct: 284 CIAENVVGMSNASVALTVYYPPRVVSLEEPELRLEHCIEFVVRGNP 329


>sp|Q5IFJ9|NTRK3_MACFA NT-3 growth factor receptor OS=Macaca
fascicularis GN=NTRK3 PE=2 SV=1
Length = 825

Score = 29.6 bits (65), Expect = 4.8
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1

Query: 283 CLAA-VLGLSSASMSGTPHDPFPVKLTSSHQLRFSYFIDFTQAGNP 149
C+A V+G+S+AS++ T + P V +LR + I+F GNP
Sbjct: 284 CIAENVVGMSNASVALTVYYPPRVVSLEEPELRLEHCIEFVVRGNP 329


>sp|Q16288|NTRK3_HUMAN NT-3 growth factor receptor OS=Homo sapiens
GN=NTRK3 PE=1 SV=2
Length = 839

Score = 29.6 bits (65), Expect = 4.8
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1

Query: 283 CLAA-VLGLSSASMSGTPHDPFPVKLTSSHQLRFSYFIDFTQAGNP 149
C+A V+G+S+AS++ T + P V +LR + I+F GNP
Sbjct: 284 CIAENVVGMSNASVALTVYYPPRVVSLEEPELRLEHCIEFVVRGNP 329


tr_hit_id A8MU16
Definition tr|A8MU16|A8MU16_HUMAN Putative uncharacterized protein ENSP00000381534 (Fragment) OS=Homo sapiens
Align length 40
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919632|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_D04.
(376 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8MU16|A8MU16_HUMAN Putative uncharacterized protein ENSP0000... 35 2.4
tr|A6WXL3|A6WXL3_OCHA4 Putative uncharacterized protein OS=Ochro... 34 3.1
tr|Q8FYA1|Q8FYA1_BRUSU Putative uncharacterized protein OS=Bruce... 33 7.0
tr|A7ATZ5|A7ATZ5_BABBO Putative uncharacterized protein OS=Babes... 33 7.0
tr|Q6ZQP6|Q6ZQP6_HUMAN cDNA FLJ46393 fis, clone THYMU3002887 OS=... 33 7.0
tr|Q6ZP83|Q6ZP83_HUMAN cDNA FLJ26336 fis, clone HRT02842 OS=Homo... 33 9.2

>tr|A8MU16|A8MU16_HUMAN Putative uncharacterized protein
ENSP00000381534 (Fragment) OS=Homo sapiens PE=4 SV=1
Length = 113

Score = 34.7 bits (78), Expect = 2.4
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Frame = -2

Query: 144 CTHVCMHG------HVYICVLCSCLAHVFMHXXXXXYMCI 43
C HVC+H HV ICV + HV+MH YMC+
Sbjct: 34 CVHVCVHVSVHMYVHVCICVHMTVYVHVYMHVCACVYMCM 73


>tr|A6WXL3|A6WXL3_OCHA4 Putative uncharacterized protein
OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168) GN=Oant_0996 PE=4 SV=1
Length = 897

Score = 34.3 bits (77), Expect = 3.1
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = -1

Query: 307 SSVSCLDGCLAAVLGLSSASMSGTPHDPFPVKLTSSHQLRFSYFIDFTQAGNPY 146
S + ++G + L + + M+ HDPF V L HQ R + + Q+G PY
Sbjct: 116 SRIEAINGLVHEPLSVQTGHMATGEHDPFAVALWREHQRRMADRLKNLQSGLPY 169


>tr|Q8FYA1|Q8FYA1_BRUSU Putative uncharacterized protein OS=Brucella
suis GN=BR1984 PE=4 SV=1
Length = 881

Score = 33.1 bits (74), Expect = 7.0
Identities = 15/62 (24%), Positives = 31/62 (50%)
Frame = -1

Query: 334 QSTENRKLCSSVSCLDGCLAAVLGLSSASMSGTPHDPFPVKLTSSHQLRFSYFIDFTQAG 155
+S ++ + + ++G + L + + +M+ HDPF + L HQ R + + Q+G
Sbjct: 99 RSPREEEIVARIEAVNGLVHEPLAVQTGTMATGTHDPFAIALWREHQKRMAERLKNLQSG 158

Query: 154 NP 149
P
Sbjct: 159 LP 160


>tr|A7ATZ5|A7ATZ5_BABBO Putative uncharacterized protein OS=Babesia
bovis GN=BBOV_II004510 PE=4 SV=1
Length = 1736

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = -1

Query: 277 AAVLGLSSASMSGTPHDPFPVKLTSSHQLRFSYFIDFTQAGNPYLHTCMYAWACIHMCFM 98
A+V+ + + SG ++ L S+++ F YF D + GN +L C WA H+C
Sbjct: 207 ASVISIFYQTESGQHYNAL---LEMSNEVGFRYFWDVSVIGNTFL--CSIGWALSHVCGF 261

Query: 97 FMSS 86
+SS
Sbjct: 262 AISS 265


>tr|Q6ZQP6|Q6ZQP6_HUMAN cDNA FLJ46393 fis, clone THYMU3002887
OS=Homo sapiens PE=2 SV=1
Length = 308

Score = 33.1 bits (74), Expect = 7.0
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = -2

Query: 153 TPTCTHVCMHGHVYICVLCSCLAHVFMHXXXXXYMCITHAPCTIETKA 10
T CTHVCMH H LC+ H+ MH +C TH +ET+A
Sbjct: 83 TGLCTHVCMHRH-----LCT---HMQMH--PQYPICATHRHTYMETEA 120


>tr|Q6ZP83|Q6ZP83_HUMAN cDNA FLJ26336 fis, clone HRT02842 OS=Homo
sapiens PE=2 SV=1
Length = 236

Score = 32.7 bits (73), Expect = 9.2
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 4/39 (10%)
Frame = -2

Query: 147 TCTHVCMH----GHVYICVLCSCLAHVFMHXXXXXYMCI 43
TCTHV + HVYICV HV++H ++C+
Sbjct: 158 TCTHVYISVFTCTHVYICVFIYICIHVYIHIYICIHICV 196