BP919637 |
Clone id |
YMU001_000127_D09 |
Library |
YMU01 |
Length |
413 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000127_D09. |
Accession |
BP919637 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1199Contig1 |
Sequence |
CTTTGGCACTATCCTCATAGTCCTTCCTTCTCTTCAAGGCTTCACGAGCAAGATCCTCTT CTCCTTTCTCGAGAGCAAGTTTTGCTCTTTTGTACCAATCATTGGCAGTTTGTTCTGCAG ATTTGTACTTGTTCTCAAGTTGCCTTTGAGACGCCAACACCTGTGCAGAAGCCTGCCTTA GCTTTATCAAATCTTCATTCATTTCTAAAACTGTCTGATCCAAAAGCTTCTCCGGATCCT CAGCTGAGCTTACGATTGCATTTGCGTAAGACTTGACGACTCGTACTACACGCTCAAAAA TGTTCATTTGAGATCCCAGTGCACCACCAGTAACCCCAGCTTCATCCTCATAACAACTAG CCAATACTGTTGCAGCTTCTCCACCAGTGAAGAAGCTGGAGTGCGTAGCCTTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q03943 |
Definition |
sp|Q03943|IM30_PEA Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum |
Align length |
108 |
Score (bit) |
160.0 |
E-value |
2.0e-39 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RQJ8 |
Definition |
tr|A9RQJ8|A9RQJ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
126 |
Score (bit) |
189.0 |
E-value |
6.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919637|Adiantum capillus-veneris mRNA, clone: YMU001_000127_D09. (413 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RQJ8|A9RQJ8_PHYPA Predicted protein OS=Physcomitrella paten... 189 6e-47 tr|A9SG56|A9SG56_PHYPA Predicted protein (Fragment) OS=Physcomit... 187 2e-46 tr|A9NX08|A9NX08_PICSI Putative uncharacterized protein OS=Picea... 178 1e-43 tr|A5B7C6|A5B7C6_VITVI Putative uncharacterized protein OS=Vitis... 164 2e-39 tr|B7FI75|B7FI75_MEDTR Putative uncharacterized protein OS=Medic... 159 5e-38 tr|A7PV45|A7PV45_VITVI Chromosome chr4 scaffold_32, whole genome... 157 3e-37 tr|B8A7P4|B8A7P4_ORYSI Putative uncharacterized protein OS=Oryza... 155 7e-37 tr|Q0JGZ1|Q0JGZ1_ORYSJ cDNA clone:001-018-A10, full insert seque... 154 2e-36 tr|B4F8L0|B4F8L0_MAIZE Putative uncharacterized protein OS=Zea m... 154 2e-36 tr|A7QAN6|A7QAN6_VITVI Chromosome chr5 scaffold_72, whole genome... 154 2e-36 tr|Q0WPJ1|Q0WPJ1_ARATH Putative uncharacterized protein At1g6526... 154 2e-36 tr|B4FVE8|B4FVE8_MAIZE Putative uncharacterized protein OS=Zea m... 153 5e-36 tr|B6T6V3|B6T6V3_MAIZE Membrane-associated 30 kDa protein OS=Zea... 151 2e-35 tr|B4FC21|B4FC21_MAIZE Putative uncharacterized protein OS=Zea m... 149 7e-35 tr|A4S1K6|A4S1K6_OSTLU Predicted protein (Fragment) OS=Ostreococ... 145 1e-33 tr|B6SHN9|B6SHN9_MAIZE Putative uncharacterized protein OS=Zea m... 137 2e-31 tr|Q66YD0|Q66YD0_CHLRE Chloroplast vesicle-inducing protein in p... 134 3e-30 tr|A9TU57|A9TU57_PHYPA Predicted protein OS=Physcomitrella paten... 133 5e-30 tr|B0C9H0|B0C9H0_ACAM1 PspA/IM30 family protein OS=Acaryochloris... 123 4e-27 tr|B8HPD4|B8HPD4_9CHRO Phage shock protein A, PspA OS=Cyanothece... 123 4e-27 tr|A0YQC6|A0YQC6_9CYAN Putative uncharacterized protein OS=Lyngb... 120 3e-26 tr|B5INS9|B5INS9_9CHRO PspA/IM30 family protein OS=Cyanobium sp.... 118 1e-25 tr|A0YQC5|A0YQC5_9CYAN Phage shock protein A, PspA OS=Lyngbya sp... 118 1e-25 tr|B1WTR6|B1WTR6_CYAA5 Putative PspA/IM30 OS=Cyanothece (strain ... 118 2e-25 tr|A3IW60|A3IW60_9CHRO Putative uncharacterized protein OS=Cyano... 118 2e-25 tr|A8YGN8|A8YGN8_MICAE Similar to Q4CB68_CROWT PspA/IM30 OS=Micr... 117 2e-25 tr|A3Z0J7|A3Z0J7_9SYNE Chloroplast membrane-associated 30 kD pro... 117 2e-25 tr|B0JKG2|B0JKG2_MICAN Plasma membrane protein OS=Microcystis ae... 117 4e-25 tr|Q05YU5|Q05YU5_9SYNE Membrane-associated 30 kD protein-like OS... 116 5e-25 tr|Q05WL2|Q05WL2_9SYNE Putative uncharacterized protein OS=Synec... 116 6e-25
>tr|A9RQJ8|A9RQJ8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_117800 PE=4 SV=1 Length = 297
Score = 189 bits (480), Expect = 6e-47 Identities = 100/126 (79%), Positives = 112/126 (88%), Gaps = 2/126 (1%) Frame = -2
Query: 373 ATVLASCYED--EAGVTGGALGSQMNIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEM 200 A VLA ED + GGAL +Q NIFERVVR+V+SYANAIVSSAEDPEKLLDQTVLEM Sbjct: 11 ACVLALAVEDSIKQRKRGGALCAQANIFERVVRIVRSYANAIVSSAEDPEKLLDQTVLEM 70
Query: 199 NEDLIKLRQASAQVLASQRQLENKYKSAEQTANDWYKRAKLALEKGEEDLAREALKRRKD 20 NEDLIK+RQASAQVLASQ+QLENKYK+A+ A+DWY+RAKLALEKG+EDLAREALKRRKD Sbjct: 71 NEDLIKMRQASAQVLASQKQLENKYKAAQTAADDWYRRAKLALEKGDEDLAREALKRRKD 130
Query: 19 YEDSAK 2 YE+SAK Sbjct: 131 YEESAK 136
>tr|A9SG56|A9SG56_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129336 PE=4 SV=1 Length = 275
Score = 187 bits (476), Expect = 2e-46 Identities = 96/109 (88%), Positives = 105/109 (96%) Frame = -2
Query: 328 GGALGSQMNIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEMNEDLIKLRQASAQVLAS 149 GGAL +Q NIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEMNEDLIK+RQASAQVLAS Sbjct: 7 GGALCTQANIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEMNEDLIKMRQASAQVLAS 66
Query: 148 QRQLENKYKSAEQTANDWYKRAKLALEKGEEDLAREALKRRKDYEDSAK 2 Q+Q+ENKYK+A+ TA+DWYKRAKLALEKG+E LAREALKRRKDYE+SAK Sbjct: 67 QKQMENKYKAAQTTADDWYKRAKLALEKGDEVLAREALKRRKDYEESAK 115
>tr|A9NX08|A9NX08_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 357
Score = 178 bits (452), Expect = 1e-43 Identities = 94/138 (68%), Positives = 113/138 (81%), Gaps = 6/138 (4%) Frame = -2
Query: 400 SSFFTGGEAATVLASCYE--DEAGV----TGGALGSQMNIFERVVRVVKSYANAIVSSAE 239 S FF GG A +A+ GV +GGALG+QMNIFERV R+VKSYANAI+SS E Sbjct: 61 SRFFNGGAWALEMAALQHAVSNDGVQIHHSGGALGTQMNIFERVARLVKSYANAILSSVE 120
Query: 238 DPEKLLDQTVLEMNEDLIKLRQASAQVLASQRQLENKYKSAEQTANDWYKRAKLALEKGE 59 DPEK+LDQTVL+MN DLIK+RQA+AQVLASQ+QLEN+YKSA Q A+DWY+RAKLALEKG+ Sbjct: 121 DPEKMLDQTVLDMNNDLIKMRQATAQVLASQKQLENRYKSARQAADDWYRRAKLALEKGD 180
Query: 58 EDLAREALKRRKDYEDSA 5 ++LAREAL RRK +ED+A Sbjct: 181 DNLAREALVRRKSFEDNA 198
>tr|A5B7C6|A5B7C6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012616 PE=4 SV=1 Length = 465
Score = 164 bits (416), Expect = 2e-39 Identities = 85/138 (61%), Positives = 109/138 (78%), Gaps = 6/138 (4%) Frame = -2
Query: 400 SSFFTGGEAA-----TVLASCYEDEAGVTGGA-LGSQMNIFERVVRVVKSYANAIVSSAE 239 SSFF GG T +A+ + G A LG++M++ +R RVVKSYANAI+SS E Sbjct: 34 SSFFNGGVRVLKVRGTXVANSNXSQCSRHGAAALGARMSLLDRFARVVKSYANAIISSME 93
Query: 238 DPEKLLDQTVLEMNEDLIKLRQASAQVLASQRQLENKYKSAEQTANDWYKRAKLALEKGE 59 DPEK+L+QTVLEMN+DLIK+RQA+AQVLASQ++LENKYK+A+Q + DWY++A+ ALEKG+ Sbjct: 94 DPEKILEQTVLEMNDDLIKMRQATAQVLASQKRLENKYKAAQQASEDWYRKAQFALEKGD 153
Query: 58 EDLAREALKRRKDYEDSA 5 EDLAREALKRRK Y D+A Sbjct: 154 EDLAREALKRRKSYADNA 171
>tr|B7FI75|B7FI75_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 210
Score = 159 bits (403), Expect = 5e-38 Identities = 76/108 (70%), Positives = 96/108 (88%) Frame = -2
Query: 328 GGALGSQMNIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEMNEDLIKLRQASAQVLAS 149 GGA+G+ MN+FER RVVKSYANAIVSS EDPEK+L+Q VLEMN+DL K+ QA+AQVLAS Sbjct: 56 GGAIGAGMNLFERFTRVVKSYANAIVSSFEDPEKILEQAVLEMNDDLTKMHQATAQVLAS 115
Query: 148 QRQLENKYKSAEQTANDWYKRAKLALEKGEEDLAREALKRRKDYEDSA 5 Q+++ENKYK+A Q + +WY++A+LAL+KGEEDLAREALKRRK + D+A Sbjct: 116 QKRMENKYKAATQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNA 163
>tr|A7PV45|A7PV45_VITVI Chromosome chr4 scaffold_32, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025044001 PE=4 SV=1 Length = 259
Score = 157 bits (396), Expect = 3e-37 Identities = 75/101 (74%), Positives = 92/101 (91%) Frame = -2
Query: 307 MNIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEMNEDLIKLRQASAQVLASQRQLENK 128 MN+F+R RVVKSYANA++SS EDPEK+L+QTVLEMN+DL K+RQA+AQVLASQ+QLEN+ Sbjct: 1 MNLFDRFARVVKSYANAVLSSFEDPEKILEQTVLEMNDDLTKMRQATAQVLASQKQLENR 60
Query: 127 YKSAEQTANDWYKRAKLALEKGEEDLAREALKRRKDYEDSA 5 YK+A+Q + DWYKRA+LAL KG+EDLAREALKRRK Y D+A Sbjct: 61 YKAAQQASEDWYKRAQLALGKGDEDLAREALKRRKSYADNA 101
>tr|B8A7P4|B8A7P4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04768 PE=4 SV=1 Length = 317
Score = 155 bits (393), Expect = 7e-37 Identities = 75/104 (72%), Positives = 93/104 (89%) Frame = -2
Query: 316 GSQMNIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEMNEDLIKLRQASAQVLASQRQL 137 G + N+ +R RVVKSYANA++SS EDPEK+LDQ VLEMN+DL K+RQA+AQVLASQ++L Sbjct: 55 GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRL 114
Query: 136 ENKYKSAEQTANDWYKRAKLALEKGEEDLAREALKRRKDYEDSA 5 ENKYKSAEQ ++DWY+RA+LAL+KG+EDLAREALKRRK Y D+A Sbjct: 115 ENKYKSAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNA 158
>tr|Q0JGZ1|Q0JGZ1_ORYSJ cDNA clone:001-018-A10, full insert sequence OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=2 SV=1 Length = 317
Score = 154 bits (390), Expect = 2e-36 Identities = 74/104 (71%), Positives = 93/104 (89%) Frame = -2
Query: 316 GSQMNIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEMNEDLIKLRQASAQVLASQRQL 137 G + N+ +R RVVKSYANA++SS EDPEK+LDQ VLEMN+DL K+RQA+AQVLASQ++L Sbjct: 55 GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRL 114
Query: 136 ENKYKSAEQTANDWYKRAKLALEKGEEDLAREALKRRKDYEDSA 5 ENKYK+AEQ ++DWY+RA+LAL+KG+EDLAREALKRRK Y D+A Sbjct: 115 ENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNA 158
>tr|B4F8L0|B4F8L0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 316
Score = 154 bits (390), Expect = 2e-36 Identities = 73/100 (73%), Positives = 92/100 (92%) Frame = -2
Query: 304 NIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEMNEDLIKLRQASAQVLASQRQLENKY 125 N+F+R+ RVV+SYANA++SS EDPEK+LDQ VLEMN+DL K+RQA+AQVLASQ++LENKY Sbjct: 58 NLFDRLTRVVRSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKY 117
Query: 124 KSAEQTANDWYKRAKLALEKGEEDLAREALKRRKDYEDSA 5 K+AEQ + DWY+RA+LAL+KG+EDLAREALKRRK Y D+A Sbjct: 118 KAAEQASADWYRRAQLALQKGDEDLAREALKRRKSYADNA 157
>tr|A7QAN6|A7QAN6_VITVI Chromosome chr5 scaffold_72, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034621001 PE=4 SV=1 Length = 260
Score = 154 bits (390), Expect = 2e-36 Identities = 73/101 (72%), Positives = 92/101 (91%) Frame = -2
Query: 307 MNIFERVVRVVKSYANAIVSSAEDPEKLLDQTVLEMNEDLIKLRQASAQVLASQRQLENK 128 M++ +R RVVKSYANAI+SS EDPEK+L+QTVLEMN+DLIK+RQA+AQVLASQ++LENK Sbjct: 1 MSLLDRFARVVKSYANAIISSMEDPEKILEQTVLEMNDDLIKMRQATAQVLASQKRLENK 60
Query: 127 YKSAEQTANDWYKRAKLALEKGEEDLAREALKRRKDYEDSA 5 YK+A+Q + DWY++A+ ALEKG+EDLAREALKRRK Y D+A Sbjct: 61 YKAAQQASEDWYRKAQFALEKGDEDLAREALKRRKSYADNA 101
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