BP919644
Clone id YMU001_000127_E04
Library
Length 541
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_E04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTGTTTTTTTTTTTTTCAGATGAAACATGTACATGTTCATAAGTGATATCATGGGCA
AGTTAAATGTCCACAGCCTTATAAGCACAAGTTATTTTACAATGAATGAAGGTACTCCTT
GGATATGAAAGCAAACCCATATCCACATAGAATACACCTTGCTTGACCTCTTGACCTCTA
ATTTTAACAAGCAATTTGAGTGATTTCATGTACGGTACACAATTTAAGATTCCACTCCAT
TTGAAGATTTCTTAGTCTGCACATTTTCTGCTTGCGACAACCCCCAAAATTGATCAGTAT
AATCTTTGTCCATCTTCTTGGTATTACATCAGGCACAAAGCAGTCAAAGATCCATAACAT
GCTTTGTCCTTGGCGTATTACCGTCCGCCAGCTTCCACATTAAAGGCGTTGAGAACCCAC
TCTTGAGAGGATGTCAAGCTTGAGATCCTAATCACAACAGTCTTCATGTCAGGCCTTGTG
TCTGCTTCGAAATTTGTACACTCACAAGCTAACTGAGTCACCTTCCACACTGAATTCAGT
G
■■Homology search results ■■ -
sp_hit_id O64483
Definition sp|O64483|SIRK_ARATH Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana
Align length 35
Score (bit) 30.4
E-value 5.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919644|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_E04.
(522 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O64483|SIRK_ARATH Senescence-induced receptor-like serine/thr... 30 5.3
sp|P73655|SYW_SYNY3 Tryptophanyl-tRNA synthetase OS=Synechocysti... 30 6.9
sp|Q7TV34|SYW_PROMM Tryptophanyl-tRNA synthetase OS=Prochlorococ... 30 6.9
sp|Q55BA0|Y9866_DICDI Probable serine/threonine-protein kinase D... 30 9.0
sp|Q7TTU9|SYW_SYNPX Tryptophanyl-tRNA synthetase OS=Synechococcu... 30 9.0

>sp|O64483|SIRK_ARATH Senescence-induced receptor-like
serine/threonine-protein kinase OS=Arabidopsis thaliana
GN=SIRK PE=2 SV=1
Length = 876

Score = 30.4 bits (67), Expect = 5.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSL 416
+ S WK++++A CT + RP M VV+ + +
Sbjct: 811 VGSAWKMSEIALACTEHTSAQRPTMSQVVMELKQI 845


>sp|P73655|SYW_SYNY3 Tryptophanyl-tRNA synthetase OS=Synechocystis
sp. (strain PCC 6803) GN=trpS PE=3 SV=2
Length = 337

Score = 30.0 bits (66), Expect = 6.9
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3

Query: 211 ILNCVPYMKSLKLLVKIRGQEVKQGVFYVDMGLLSYP 101
+LNCV + L+ +++ + + VKQG V +GLL YP
Sbjct: 94 LLNCVTPLNWLERMIQFKEKAVKQGE-NVSVGLLDYP 129


>sp|Q7TV34|SYW_PROMM Tryptophanyl-tRNA synthetase OS=Prochlorococcus
marinus (strain MIT 9313) GN=trpS PE=3 SV=1
Length = 337

Score = 30.0 bits (66), Expect = 6.9
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3

Query: 211 ILNCVPYMKSLKLLVKIRGQEVKQGVFYVDMGLLSYP 101
+LNCV + L+ +++ + + VKQG V +GLL YP
Sbjct: 94 LLNCVTPLNWLERMIQFKEKSVKQG-DNVSVGLLDYP 129


>sp|Q55BA0|Y9866_DICDI Probable serine/threonine-protein kinase
DDB_G0271402 OS=Dictyostelium discoideum GN=DDB_G0271402
PE=3 SV=1
Length = 765

Score = 29.6 bits (65), Expect = 9.0
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -3

Query: 496 QLACECTNFEADTRPDMKTVVIRISSLT 413
+L +CT ++ D RP K + R+ SLT
Sbjct: 302 KLVLDCTEYDPDNRPTFKEITERLKSLT 329


>sp|Q7TTU9|SYW_SYNPX Tryptophanyl-tRNA synthetase OS=Synechococcus
sp. (strain WH8102) GN=trpS PE=3 SV=1
Length = 337

Score = 29.6 bits (65), Expect = 9.0
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -3

Query: 211 ILNCVPYMKSLKLLVKIRGQEVKQGVFYVDMGLLSYP 101
+LNCV + L+ +++ + + VKQG V +GLL YP
Sbjct: 94 LLNCVTPLNWLERMIQFKEKAVKQG-DNVSVGLLDYP 129


tr_hit_id A9SN98
Definition tr|A9SN98|A9SN98_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 47
Score (bit) 54.3
E-value 4.0e-06
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919644|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_E04.
(522 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SN98|A9SN98_PHYPA Predicted protein OS=Physcomitrella paten... 54 4e-06
tr|A9S7M2|A9S7M2_PHYPA Predicted protein (Fragment) OS=Physcomit... 43 0.008
tr|A9TXT1|A9TXT1_PHYPA Predicted protein (Fragment) OS=Physcomit... 43 0.011
tr|A7QUK7|A7QUK7_VITVI Chromosome chr10 scaffold_179, whole geno... 41 0.041
tr|A5C4M5|A5C4M5_VITVI Putative uncharacterized protein OS=Vitis... 40 0.053
tr|A7QUK6|A7QUK6_VITVI Chromosome chr10 scaffold_179, whole geno... 40 0.090
tr|Q6UD74|Q6UD74_MEDTR LysM domain-containing receptor-like kina... 39 0.12
tr|A7PX72|A7PX72_VITVI Chromosome chr12 scaffold_36, whole genom... 39 0.12
tr|A5AH47|A5AH47_VITVI Putative uncharacterized protein OS=Vitis... 39 0.12
tr|A3BVA4|A3BVA4_ORYSJ Putative uncharacterized protein OS=Oryza... 39 0.15
tr|Q6ZD33|Q6ZD33_ORYSJ Receptor protein kinase PERK1-like protei... 39 0.20
tr|Q6UD75|Q6UD75_MEDTR LysM domain-containing receptor-like kina... 39 0.20
tr|Q0J431|Q0J431_ORYSJ Os08g0538300 protein (Fragment) OS=Oryza ... 39 0.20
tr|B8B954|B8B954_ORYSI Putative uncharacterized protein OS=Oryza... 39 0.20
tr|B8A0N7|B8A0N7_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.20
tr|B7F461|B7F461_ORYSJ cDNA clone:001-035-B08, full insert seque... 39 0.20
tr|B6SWW8|B6SWW8_MAIZE LysM receptor-like kinase OS=Zea mays PE=... 39 0.20
tr|A5YJW5|A5YJW5_SOYBN LYK2 OS=Glycine max GN=LYK2 PE=4 SV=1 38 0.26
tr|Q94LI5|Q94LI5_ORYSJ Putative wall-associated protein kinase O... 36 1.00
tr|Q10A72|Q10A72_ORYSJ Protein kinase domain containing protein,... 36 1.00
tr|A3C1Y6|A3C1Y6_ORYSJ Putative uncharacterized protein OS=Oryza... 36 1.00
tr|Q7XAQ7|Q7XAQ7_ARAGE Receptor-like protein kinase OS=Arabis ge... 36 1.3
tr|A9S1E7|A9S1E7_PHYPA Predicted protein (Fragment) OS=Physcomit... 36 1.3
tr|A5YJW0|A5YJW0_SOYBN LYK11 OS=Glycine max GN=LYK11 PE=4 SV=1 36 1.3
tr|Q9FZB7|Q9FZB7_ARATH Putative uncharacterized protein T14L22.3... 35 2.2
tr|Q9C8I9|Q9C8I9_ARATH Receptor protein kinase, putative OS=Arab... 35 2.2
tr|Q7XAR8|Q7XAR8_ARATH Receptor-like protein kinase OS=Arabidops... 35 2.2
tr|Q7XAR7|Q7XAR7_ARATH Receptor-like protein kinase OS=Arabidops... 35 2.2
tr|Q7XAR6|Q7XAR6_ARATH Receptor-like protein kinase OS=Arabidops... 35 2.2
tr|Q7XAR5|Q7XAR5_ARATH Receptor-like protein kinase OS=Arabidops... 35 2.2

>tr|A9SN98|A9SN98_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_132621 PE=4 SV=1
Length = 477

Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/47 (53%), Positives = 37/47 (78%), Gaps = 1/47 (2%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSS-QEWVLNAF 383
+++VWK+ QLA CT FEA+TRP M++VV+++ +LTSS QEW + F
Sbjct: 430 IDAVWKMAQLAKWCTQFEANTRPTMRSVVVKLMTLTSSTQEWDVGHF 476


>tr|A9S7M2|A9S7M2_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_125385 PE=4 SV=1
Length = 317

Score = 43.1 bits (100), Expect = 0.008
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSS-QEWVLNAFNVEAG 368
L + WK+ QLA CT + RP+M+ V+ + +L+SS Q+W L++F +G
Sbjct: 256 LEAAWKMAQLAEACTQEDPTRRPNMRKAVVALMTLSSSTQDWELSSFGRHSG 307


>tr|A9TXT1|A9TXT1_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_1279 PE=4 SV=1
Length = 554

Score = 42.7 bits (99), Expect = 0.011
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTS-SQEWVLNAF 383
L++VWK+ QLA CT+ D RP M+ V+++ +L S +QEW + F
Sbjct: 508 LDAVWKMAQLARRCTHQSPDMRPTMRFAVVQLMTLASVTQEWDVGYF 554


>tr|A7QUK7|A7QUK7_VITVI Chromosome chr10 scaffold_179, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00006888001
PE=4 SV=1
Length = 857

Score = 40.8 bits (94), Expect = 0.041
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSS-QEWVLNAF 383
L+S+WK+ LA CT RP M+++V+ + +L+SS ++W + +F
Sbjct: 798 LDSIWKMAHLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGSF 844


>tr|A5C4M5|A5C4M5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_030803 PE=3 SV=1
Length = 2252

Score = 40.4 bits (93), Expect = 0.053
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSS-QEWVLNAF 383
L+S+WK+ LA CT RP M+++V+ + +L+SS ++W + +F
Sbjct: 1601 LDSIWKMAXLAKACTQENPQLRPSMRSIVVALMTLSSSTEDWDVGSF 1647



Score = 39.7 bits (91), Expect = 0.090
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSSQE 401
L+ +WK+ QLA CT + RP M++VV+ + +L+SS E
Sbjct: 2193 LDLIWKMAQLAKACTQEDPQLRPSMQSVVVALMTLSSSTE 2232


>tr|A7QUK6|A7QUK6_VITVI Chromosome chr10 scaffold_179, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00006887001
PE=4 SV=1
Length = 653

Score = 39.7 bits (91), Expect = 0.090
Identities = 17/40 (42%), Positives = 27/40 (67%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSSQE 401
L+ +WK+ QLA CT + RP M++VV+ + +L+SS E
Sbjct: 594 LDLIWKMAQLAKACTQEDPQLRPSMQSVVVALMTLSSSTE 633


>tr|Q6UD74|Q6UD74_MEDTR LysM domain-containing receptor-like kinase
7 OS=Medicago truncatula GN=LYK7 PE=4 SV=1
Length = 620

Score = 39.3 bits (90), Expect = 0.12
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSSQE 401
++ V+K+ QLA CTN + RP+M +VV+ +++LTS+ E
Sbjct: 561 IDHVFKMAQLAKVCTNSDPQQRPNMSSVVVALTTLTSTTE 600


>tr|A7PX72|A7PX72_VITVI Chromosome chr12 scaffold_36, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025924001
PE=4 SV=1
Length = 622

Score = 39.3 bits (90), Expect = 0.12
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSS-QEWVLNAF 383
L+SV K+ QLA CT RP M+T+V+ + +L+SS ++W + +F
Sbjct: 563 LDSVRKMAQLAKACTQENPQLRPSMRTIVVALMTLSSSTEDWDVGSF 609


>tr|A5AH47|A5AH47_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_005320 PE=4 SV=1
Length = 596

Score = 39.3 bits (90), Expect = 0.12
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSS-QEWVLNAF 383
L+SV K+ QLA CT RP M+T+V+ + +L+SS ++W + +F
Sbjct: 521 LDSVRKMAQLAKACTQENPQLRPSMRTIVVALMTLSSSTEDWDVGSF 567


>tr|A3BVA4|A3BVA4_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_026976 PE=4 SV=1
Length = 625

Score = 38.9 bits (89), Expect = 0.15
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = -3

Query: 520 LNSVWKVTQLACECTNFEADTRPDMKTVVIRISSLTSSQE-WVLNAFNVEAGGR 362
++S+ K+TQLA CT + RP M++VV+ + +L+S+ E W +N G +
Sbjct: 555 IDSILKLTQLAKVCTQEDPKLRPSMRSVVVALMTLSSTSEFWDMNNLYENQGNK 608