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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919652
Clone id YMU001_000127_F01
Library
Length 549
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTTTTTTATCCACTCAAATCATGTTGACTATTTCTATCCATTGAAAACA
CACTCCCTTCCAATTCCTCATCGAAGCTGAGAAGGAAGAGAGCACTTATTACAGCACTCA
GCACACTGAGTAACATGGCTGTGTTTAATACATTTTTCCGTTGAGAAACAAATCTGTACA
ATCGGAATTCACTCATTCACTCACACACATACAAACACAAAAAATGAACCTCTATGGTGG
ATAATCGGGGACAAGATCATTTGCATCCTAAACCCCAAAGAAAGACCTATGGAGCTCTCA
GATCTAATCAAGTTCGCTCTAAGAATGTGAATAGTTTTGTGCCAAACTCATTCAAGCATC
TCCCAGTAGAGGATTGTGATCAGCGGAACGGTTGGCATAATATGCCATGCCAGAGACGAG
CAATCAGGCAATGCCCGTAATGGCAAGATCAATGCCAAAGAGAATGCAAACCACCTGGAA
ACCATACGCGCCAGCTAGTGCAACATTGAGGATAGCCAAAATAATGGCAATGGTGCCAGA
ACCTGCAAG
■■Homology search results ■■ -
sp_hit_id Q03PV0
Definition sp|Q03PV0|RPOC_LACBA DNA-directed RNA polymerase subunit beta' OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170)
Align length 81
Score (bit) 33.5
E-value 0.65
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919652|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_F01.
         (531 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q03PV0|RPOC_LACBA DNA-directed RNA polymerase subunit beta' O...    33   0.65 
sp|A7UA95|RADIL_DANRE Ras-associating and dilute domain-containi...    32   1.4  
sp|Q54HD2|NDRD_DICDI Probable serine/threonine-protein kinase nd...    32   1.9  
sp|Q86QU7|KGX47_CENLL Potassium channel toxin gamma-KTx 4.7 OS=C...    30   7.2  
sp|Q86QT9|KGX44_CENEX Potassium channel toxin gamma-KTx 4.4 OS=C...    30   7.2  
sp|Q86QV3|KGX13_CENGR Potassium channel toxin gamma-KTx 1.3 OS=C...    30   7.2  
sp|Q86QU9|KGX41_CENLL Potassium channel toxin gamma-KTx 4.1 OS=C...    30   9.4  

>sp|Q03PV0|RPOC_LACBA DNA-directed RNA polymerase subunit beta'
           OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170)
           GN=rpoC PE=3 SV=1
          Length = 1215

 Score = 33.5 bits (75), Expect = 0.65
 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
 Frame = +3

Query: 147 ETNLYNRNSLIHSHTYKHKK*TSMVDNRGQDHLHPKPQRKTYGALRSNQV---------- 296
           E  L  RN ++H HT    + TSM D    D    K    T G L  N +          
Sbjct: 522 EATLAYRNGIVHWHTRVGVQVTSMPDKPFTDEQRSKIMVTTVGKLIFNNILPKSFPYLNE 581

Query: 297 -RSKNVNSFVPNSFKHLPVED 356
             S N+N +VP+ +   P ED
Sbjct: 582 PTSTNLNGYVPDKYFLEPGED 602


>sp|A7UA95|RADIL_DANRE Ras-associating and dilute domain-containing
            protein OS=Danio rerio GN=radil PE=2 SV=1
          Length = 1124

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +3

Query: 174  LIHSHTYKHKK*TSMVDNRGQDHLHPKPQRKTYGALRSNQVRSKNVNSFVPNSFKHLPVE 353
            L   HTY         ++  Q+H H     KT G +RS     K +N F+ N  +  P+ 
Sbjct: 945  LYPEHTYIQSNTAHYPEHASQEHTHTHSHTKTNGCMRSTP-EHKKINGFISNGIEG-PLS 1002

Query: 354  DC 359
             C
Sbjct: 1003 GC 1004


>sp|Q54HD2|NDRD_DICDI Probable serine/threonine-protein kinase ndrD
           OS=Dictyostelium discoideum GN=ndrD PE=3 SV=1
          Length = 2112

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 397 DEQSGNARNGKINAKENANHLETIRAS*CNIEDSQNNGN 513
           D+   ++ NG  N  +N +HL     +  NI ++ NNGN
Sbjct: 231 DDNRNHSTNGNSNQSQNIHHLSLNNGNLTNINNNNNNGN 269


>sp|Q86QU7|KGX47_CENLL Potassium channel toxin gamma-KTx 4.7
           OS=Centruroides limpidus limpidus GN=ERG4 PE=2 SV=1
          Length = 43

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 152 CFSTEKCIKHSHVTQCAECCNK 87
           C    KC K+ +  QC ECC K
Sbjct: 5   CVDKSKCAKYGYYGQCDECCKK 26


>sp|Q86QT9|KGX44_CENEX Potassium channel toxin gamma-KTx 4.4
           OS=Centruroides exilicauda GN=ERG3 PE=2 SV=1
          Length = 43

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 152 CFSTEKCIKHSHVTQCAECCNK 87
           C    KC K+ +  QC ECC K
Sbjct: 5   CVDKSKCAKYGYYYQCDECCKK 26


>sp|Q86QV3|KGX13_CENGR Potassium channel toxin gamma-KTx 1.3
           OS=Centruroides gracilis GN=ERG1 PE=2 SV=1
          Length = 42

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 152 CFSTEKCIKHSHVTQCAECCNK 87
           C    +C K+ H  +C +CC K
Sbjct: 5   CVDKSRCAKYGHYQECTDCCKK 26


>sp|Q86QU9|KGX41_CENLL Potassium channel toxin gamma-KTx 4.1
           OS=Centruroides limpidus limpidus GN=ERG2 PE=1 SV=1
          Length = 43

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 152 CFSTEKCIKHSHVTQCAECCNK 87
           C    KC K+ +  QC ECC K
Sbjct: 5   CVDKSKCSKYGYYGQCDECCKK 26
tr_hit_id Q8IAQ3
Definition tr|Q8IAQ3|Q8IAQ3_PLAF7 Putative uncharacterized protein MAL8P1.134 OS=Plasmodium falciparum (isolate 3D7)
Align length 66
Score (bit) 35.0
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919652|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_F01.
         (531 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8IAQ3|Q8IAQ3_PLAF7 Putative uncharacterized protein MAL8P1.1...    35   2.4  
tr|B3L9I6|B3L9I6_PLAKH Putative uncharacterized protein OS=Plasm...    35   2.4  
tr|Q8ID65|Q8ID65_PLAF7 Putative uncharacterized protein PF13_033...    34   5.3  
tr|Q1RLZ3|Q1RLZ3_DANRE Zgc:136669 OS=Danio rerio GN=egfl7 PE=2 SV=1    33   6.9  

>tr|Q8IAQ3|Q8IAQ3_PLAF7 Putative uncharacterized protein MAL8P1.134
            OS=Plasmodium falciparum (isolate 3D7) GN=MAL8P1.134 PE=4
            SV=1
          Length = 1870

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 18/66 (27%), Positives = 35/66 (53%)
 Frame = +3

Query: 147  ETNLYNRNSLIHSHTYKHKK*TSMVDNRGQDHLHPKPQRKTYGALRSNQVRSKNVNSFVP 326
            + N  N N++   HT KHK      +N+ +D    + ++ TY    +N  + +N N+ + 
Sbjct: 1067 DNNNNNNNNVTSDHTCKHK--NEHNNNKKEDEKRKREKKNTY---TTNHDKRENNNTHIN 1121

Query: 327  NSFKHL 344
            N++KH+
Sbjct: 1122 NNYKHV 1127


>tr|B3L9I6|B3L9I6_PLAKH Putative uncharacterized protein
           OS=Plasmodium knowlesi (strain H) GN=PKH_124820 PE=4
           SV=1
          Length = 3334

 Score = 35.0 bits (79), Expect = 2.4
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
 Frame = +3

Query: 60  SSKLRRKRALITALSTLSNMAVFNTFFR*ETNLYNRN-SLIHSHTYKHKK*TSMVDNRGQ 236
           S   +RK  + T +S+     ++N +   +T LY +  S I S +  H         RG+
Sbjct: 261 SESEKRKLRITTLISSKLKNKIYNYY---DTLLYEKKPSSIFSKSTNH---------RGE 308

Query: 237 DHLHPKPQRKTYGALRSNQVRSKNVNSFVPNSFKHLPVEDCDQRN 371
             LH K   K  GAL S  +R+K  N F+ +  K+   +   +R+
Sbjct: 309 KRLHKKKAIKDSGALGSKGIRTKIKNKFILSGRKNKQDDSFKERS 353


>tr|Q8ID65|Q8ID65_PLAF7 Putative uncharacterized protein PF13_0339
            OS=Plasmodium falciparum (isolate 3D7) GN=PF13_0339 PE=4
            SV=1
          Length = 1813

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 23/95 (24%), Positives = 41/95 (43%)
 Frame = +3

Query: 48   PSNSSSKLRRKRALITALSTLSNMAVFNTFFR*ETNLYNRNSLIHSHTYKHKK*TSMVDN 227
            P ++ +K+      +   S L+   +FNT      N++N+N++  ++T      T++   
Sbjct: 1207 PYDNINKINNVPTFVNMSSALNTNNIFNTNALTANNIFNKNNVFGTNTS-----TNLFGT 1261

Query: 228  RGQDHLHPKPQRKTYGALRSNQVRSKNVNSFVPNS 332
                 L+P P   T G   SN   S   N F  N+
Sbjct: 1262 NKNSTLNPIPAISTGGTFNSNIFSSGTSNIFGTNN 1296


>tr|Q1RLZ3|Q1RLZ3_DANRE Zgc:136669 OS=Danio rerio GN=egfl7 PE=2 SV=1
          Length = 277

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 12/71 (16%)
 Frame = -3

Query: 496 YPQCCTSWRVWFPGGLH-SLWH*SCHYG-------HCLIARLWHGILCQ----PFR*SQS 353
           YP+CC  WR       + ++   SC  G       HC   R W G  CQ      + +QS
Sbjct: 89  YPECCPGWRRMHSHNCNQAVCEQSCANGGSCVRPNHCACLRGWTGRFCQIDVDECKEAQS 148

Query: 352 STGRCLNEFGT 320
            + +C+N  G+
Sbjct: 149 CSQKCVNTLGS 159