BP919678
Clone id YMU001_000127_H03
Library
Length 321
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000127_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ATAATCGTGTGGACAGACTTATGCAGGGGTTTACCCTGCTTCCAGTGAAAGAGGATGAAG
TGATCGTGGAAGCTTTGAACCAGGCATTGAGACAGAACCGTCCGGGGGATGAACTGGAGC
TTGAGGATGAAGACATGTTAAAATCAACGTATCATCAAGTGCATTCATTTGATGGTGTCT
GTGAGAGAGATTATTATACAGAAGCTTCTAATTCAAATGAAGTTGTGAGGAGCATGAGTG
GAAGTCTTGATGACTCTGTGTCACAGAGTTCCTTTCAGAGTTCCCGGATGTGGACGTGCA
GAGGAGGCGACTGGAAGTTGA
■■Homology search results ■■ -
sp_hit_id O70141
Definition sp|O70141|SEM6B_RAT Semaphorin-6B OS=Rattus norvegicus
Align length 43
Score (bit) 29.3
E-value 6.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919678|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_H03.
(321 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O70141|SEM6B_RAT Semaphorin-6B OS=Rattus norvegicus GN=Sema6b... 29 6.3

>sp|O70141|SEM6B_RAT Semaphorin-6B OS=Rattus norvegicus GN=Sema6b
PE=2 SV=1
Length = 887

Score = 29.3 bits (64), Expect = 6.3
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -1

Query: 183 HRHHQMNALDDTLILTCLHPQAPVHPPDGSVSMPGSKL--PRS 61
H H ++A T +L H +AP PP + S P S+L PRS
Sbjct: 738 HSHALLSASASTSLLLLAHTRAPEQPPVPTESGPESRLCAPRS 780


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919678|Adiantum capillus-veneris mRNA, clone:
YMU001_000127_H03.
(321 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******