BP919688 |
Clone id |
YMU001_000128_A03 |
Library |
YMU01 |
Length |
402 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000128_A03. |
Accession |
BP919688 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTGGAACATCCACCTTGTCATGTCAATCATGCTCGTATAAGCTTTCTCCACACACACAAT AAAATAACTACCTTATCATCTTCTTGTAGATGCCAAACATATTTTTGCGCCTTCCACTTA AATCATGATAAAGAATTCCTTCTCCAAGAAGTGTCTTTTCTAGCTTCCCGATAGCAGCAA CGATTGTGGATTCCCTAAAACCGCCAGAGAGCTTCTCTGCTAGCTTTTGATGCTCCTGAG GTTTCAAGTGCTTGAAACACAAATCTTCGAGTTCCGCTTTCCAGCTCCATATTCCAAGCC TATTAGCTAAGGGAACAAAAATCTGAAGGGTCTCCTTGGCTATCCTCAATTGCTTAGGTT CTGGAAGTGCTTCCAGAGTTCTCATATTATGCAGTCTATCGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P74007 |
Definition |
sp|P74007|SPOT_SYNY3 Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803) |
Align length |
110 |
Score (bit) |
107.0 |
E-value |
2.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919688|Adiantum capillus-veneris mRNA, clone: YMU001_000128_A03. (402 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P74007|SPOT_SYNY3 Probable guanosine-3',5'-bis(diphosphate) 3... 107 2e-23 sp|O52177|RELA_MYXXA GTP pyrophosphokinase OS=Myxococcus xanthus... 91 2e-18 sp|O54408|RELA_BACSU GTP pyrophosphokinase OS=Bacillus subtilis ... 89 7e-18 sp|Q8CS97|RELA_STAES GTP pyrophosphokinase OS=Staphylococcus epi... 88 2e-17 sp|Q5HNR8|RELA_STAEQ GTP pyrophosphokinase OS=Staphylococcus epi... 88 2e-17 sp|P0A0E9|RELA_STAAW GTP pyrophosphokinase OS=Staphylococcus aur... 86 7e-17 sp|P0A0F0|RELA_STAAU GTP pyrophosphokinase OS=Staphylococcus aur... 86 7e-17 sp|Q6G8T5|RELA_STAAS GTP pyrophosphokinase OS=Staphylococcus aur... 86 7e-17 sp|Q6GG70|RELA_STAAR GTP pyrophosphokinase OS=Staphylococcus aur... 86 7e-17 sp|Q99TL8|RELA_STAAN GTP pyrophosphokinase OS=Staphylococcus aur... 86 7e-17 sp|Q54089|RELA_STREQ Putative GTP pyrophosphokinase OS=Streptoco... 85 1e-16 sp|Q931Q4|RELA_STAAM GTP pyrophosphokinase OS=Staphylococcus aur... 84 3e-16 sp|P0AG26|SPOT_SHIFL Guanosine-3',5'-bis(diphosphate) 3'-pyropho... 81 1e-15 sp|P0AG24|SPOT_ECOLI Guanosine-3',5'-bis(diphosphate) 3'-pyropho... 81 1e-15 sp|P0AG25|SPOT_ECO57 Guanosine-3',5'-bis(diphosphate) 3'-pyropho... 81 1e-15 sp|Q49640|RELA_MYCLE Probable GTP pyrophosphokinase OS=Mycobacte... 81 2e-15 sp|P66014|RELA_MYCTU Probable GTP pyrophosphokinase OS=Mycobacte... 79 5e-15 sp|P66015|RELA_MYCBO Probable GTP pyrophosphokinase OS=Mycobacte... 79 5e-15 sp|O51216|SPOT_BORBU Guanosine-3',5'-bis(diphosphate) 3'-pyropho... 79 7e-15 sp|O34098|SPOT_SPICI Guanosine-3',5'-bis(diphosphate) 3'-pyropho... 77 2e-14 sp|P43811|SPOT_HAEIN Guanosine-3',5'-bis(diphosphate) 3'-pyropho... 76 6e-14 sp|O67012|SPOT_AQUAE Guanosine-3',5'-bis(diphosphate) 3'-pyropho... 75 8e-14 sp|O87331|RELA_CORGL GTP pyrophosphokinase OS=Corynebacterium gl... 74 3e-13 sp|P0AG23|RELA_SHIFL GTP pyrophosphokinase OS=Shigella flexneri ... 73 4e-13 sp|P0AG20|RELA_ECOLI GTP pyrophosphokinase OS=Escherichia coli (... 73 4e-13 sp|P0AG21|RELA_ECOL6 GTP pyrophosphokinase OS=Escherichia coli O... 73 4e-13 sp|P0AG22|RELA_ECO57 GTP pyrophosphokinase OS=Escherichia coli O... 73 4e-13 sp|A5VPI9|RSH_BRUO2 GTP pyrophosphokinase rsh OS=Brucella ovis (... 70 4e-12 sp|Q8YG65|RSH_BRUME GTP pyrophosphokinase rsh OS=Brucella melite... 70 4e-12 sp|Q57E90|RSH_BRUAB GTP pyrophosphokinase rsh OS=Brucella abortu... 70 4e-12
>sp|P74007|SPOT_SYNY3 Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Synechocystis sp. (strain PCC 6803) GN=spoT PE=3 SV=1 Length = 760
Score = 107 bits (266), Expect = 2e-23 Identities = 58/110 (52%), Positives = 73/110 (66%), Gaps = 2/110 (1%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DRLHNMRTL+AL KQ RIA+ET IF PLANRLGIW +K ELEDL FK+L+P ++K+ Sbjct: 170 DRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPDSYRKI 229
Query: 220 AEKL--SGGFRESTIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKM 77 + G RES + L L EGI + +L GR K+++GIY KM Sbjct: 230 QSLVVEKRGDRESRLETVKDMLRFRLRDEGIEHFELQGRPKHLYGIYYKM 279
>sp|O52177|RELA_MYXXA GTP pyrophosphokinase OS=Myxococcus xanthus GN=relA PE=3 SV=1 Length = 757
Score = 90.9 bits (224), Expect = 2e-18 Identities = 53/109 (48%), Positives = 71/109 (65%), Gaps = 1/109 (0%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DR HNMRTL+ + E KQ RIA+ETL I+ PLANRLGI K ELEDL F+++KPQE L Sbjct: 160 DRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQEFFAL 219
Query: 220 AEKLSGGFRE-STIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKM 77 KL+ +E + L ++ L E L ++SGR K+++ IYKK+ Sbjct: 220 QAKLNKRKKEREKYIEDTCDLIRSKLAERGLKGEVSGRFKHVYSIYKKI 268
>sp|O54408|RELA_BACSU GTP pyrophosphokinase OS=Bacillus subtilis GN=relA PE=3 SV=2 Length = 734
Score = 89.0 bits (219), Expect = 7e-18 Identities = 49/111 (44%), Positives = 72/111 (64%), Gaps = 2/111 (1%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DRLHNMRTL+ LP+ KQ RI+ ETL+IF PLA+RLGI K ELED ++L PQ++ ++ Sbjct: 144 DRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYYRI 203
Query: 220 AE--KLSGGFRESTIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKMI 74 K RE + + +++K + E + D SGR K+++ IY+KM+ Sbjct: 204 VNLMKKKRAERELYVDEVVNEVKKR-VEEVNIKADFSGRPKHIYSIYRKMV 253
>sp|Q8CS97|RELA_STAES GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=relA PE=3 SV=1 Length = 729
Score = 87.8 bits (216), Expect = 2e-17 Identities = 49/112 (43%), Positives = 76/112 (67%), Gaps = 2/112 (1%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DRLHNMRTL+A+P KQ+RI+KETL+I+ PLA+RLGI + K ELED +++ ++ ++ Sbjct: 144 DRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQYFRI 203
Query: 220 AE--KLSGGFRESTIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKMIR 71 K RE+ I AI K+ K + + L +++GR K+++ IY+KMI+ Sbjct: 204 VNLMKKKRSEREAYITNAINKI-KNEMTKMNLSGEINGRPKHIYSIYRKMIK 254
>sp|Q5HNR8|RELA_STAEQ GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=relA PE=3 SV=1 Length = 729
Score = 87.8 bits (216), Expect = 2e-17 Identities = 49/112 (43%), Positives = 76/112 (67%), Gaps = 2/112 (1%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DRLHNMRTL+A+P KQ+RI+KETL+I+ PLA+RLGI + K ELED +++ ++ ++ Sbjct: 144 DRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQYFRI 203
Query: 220 AE--KLSGGFRESTIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKMIR 71 K RE+ I AI K+ K + + L +++GR K+++ IY+KMI+ Sbjct: 204 VNLMKKKRSEREAYITNAINKI-KNEMTKMNLSGEINGRPKHIYSIYRKMIK 254
>sp|P0A0E9|RELA_STAAW GTP pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=relA PE=3 SV=1 Length = 736
Score = 85.5 bits (210), Expect = 7e-17 Identities = 46/112 (41%), Positives = 76/112 (67%), Gaps = 2/112 (1%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DRLHNMRTL+A+P KQ+RI++ETL+I+ PLA+RLGI + K ELED +++ ++ ++ Sbjct: 151 DRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRI 210
Query: 220 AE--KLSGGFRESTIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKMIR 71 K RE+ I AI ++ +T + + D++GR K+++ IY+KM++ Sbjct: 211 VNLMKKKRSEREAYIETAIDRI-RTEMDRMNIEGDINGRPKHIYSIYRKMMK 261
>sp|P0A0F0|RELA_STAAU GTP pyrophosphokinase OS=Staphylococcus aureus GN=relA PE=3 SV=1 Length = 736
Score = 85.5 bits (210), Expect = 7e-17 Identities = 46/112 (41%), Positives = 76/112 (67%), Gaps = 2/112 (1%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DRLHNMRTL+A+P KQ+RI++ETL+I+ PLA+RLGI + K ELED +++ ++ ++ Sbjct: 151 DRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRI 210
Query: 220 AE--KLSGGFRESTIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKMIR 71 K RE+ I AI ++ +T + + D++GR K+++ IY+KM++ Sbjct: 211 VNLMKKKRSEREAYIETAIDRI-RTEMDRMNIEGDINGRPKHIYSIYRKMMK 261
>sp|Q6G8T5|RELA_STAAS GTP pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476) GN=relA PE=3 SV=1 Length = 736
Score = 85.5 bits (210), Expect = 7e-17 Identities = 46/112 (41%), Positives = 76/112 (67%), Gaps = 2/112 (1%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DRLHNMRTL+A+P KQ+RI++ETL+I+ PLA+RLGI + K ELED +++ ++ ++ Sbjct: 151 DRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRI 210
Query: 220 AE--KLSGGFRESTIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKMIR 71 K RE+ I AI ++ +T + + D++GR K+++ IY+KM++ Sbjct: 211 VNLMKKKRSEREAYIETAIDRI-RTEMDRMNIEGDINGRPKHIYSIYRKMMK 261
>sp|Q6GG70|RELA_STAAR GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252) GN=relA PE=3 SV=1 Length = 736
Score = 85.5 bits (210), Expect = 7e-17 Identities = 46/112 (41%), Positives = 76/112 (67%), Gaps = 2/112 (1%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DRLHNMRTL+A+P KQ+RI++ETL+I+ PLA+RLGI + K ELED +++ ++ ++ Sbjct: 151 DRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRI 210
Query: 220 AE--KLSGGFRESTIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKMIR 71 K RE+ I AI ++ +T + + D++GR K+++ IY+KM++ Sbjct: 211 VNLMKKKRSEREAYIETAIDRI-RTEMDRMNIEGDINGRPKHIYSIYRKMMK 261
>sp|Q99TL8|RELA_STAAN GTP pyrophosphokinase OS=Staphylococcus aureus (strain N315) GN=relA PE=1 SV=2 Length = 736
Score = 85.5 bits (210), Expect = 7e-17 Identities = 46/112 (41%), Positives = 76/112 (67%), Gaps = 2/112 (1%) Frame = -3
Query: 400 DRLHNMRTLEALPEPKQLRIAKETLQIFVPLANRLGIWSWKAELEDLCFKHLKPQEHQKL 221 DRLHNMRTL+A+P KQ+RI++ETL+I+ PLA+RLGI + K ELED +++ ++ ++ Sbjct: 151 DRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQYFRI 210
Query: 220 AE--KLSGGFRESTIVAAIGKLEKTLLGEGILYHDLSGRRKNMFGIYKKMIR 71 K RE+ I AI ++ +T + + D++GR K+++ IY+KM++ Sbjct: 211 VNLMKKKRSEREAYIETAIDRI-RTEMDRMNIEGDINGRPKHIYSIYRKMMK 261
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RLB2 |
Definition |
tr|A9RLB2|A9RLB2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
110 |
Score (bit) |
141.0 |
E-value |
2.0e-32 |
Report |
|