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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919692
Clone id YMU001_000128_A10
Library
Length 150
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000128_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATTGCATCCAAGAGGAGCTAATCTTCTTTCCCACACAATGAAAGTGACAGTCTGCTTCAA
TGGAGTCTCCGCTCGAAGTTGTGTACACATGTGAAGAAGCCGAAACACTATCTAGATTAG
CCTTTTCATGCAGTCGAATATCCACATGCT
■■Homology search results ■■ -
sp_hit_id Q9WUL5
Definition sp|Q9WUL5|PD1L2_MOUSE Programmed cell death 1 ligand 2 OS=Mus musculus
Align length 36
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919692|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_A10.
         (150 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WUL5|PD1L2_MOUSE Programmed cell death 1 ligand 2 OS=Mus mu...    31   2.2  
sp|Q9P260|K1468_HUMAN LisH domain and HEAT repeat-containing pro...    30   5.0  

>sp|Q9WUL5|PD1L2_MOUSE Programmed cell death 1 ligand 2 OS=Mus
           musculus GN=Pdcd1lg2 PE=1 SV=1
          Length = 247

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = -3

Query: 148 HVDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHF 41
           ++ ++LH  A L +V+A   VYT   G S+  +C F
Sbjct: 9   NLSLQLHPVAALFTVTAPKEVYTVDVGSSVSLECDF 44


>sp|Q9P260|K1468_HUMAN LisH domain and HEAT repeat-containing
           protein KIAA1468 OS=Homo sapiens GN=KIAA1468 PE=1 SV=2
          Length = 1216

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +1

Query: 1   IASKRS*SSFPHNESDSLLQWSLRSKLCTHVKKPKHYLD*PFH 129
           I  + S +SFP  E + +   SL SK   H  KP   L   FH
Sbjct: 448 IPKENSPNSFPRREREGMPPSSLSSKKTVHFDKPNRKLSPAFH 490
tr_hit_id A7PGD2
Definition tr|A7PGD2|A7PGD2_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera
Align length 48
Score (bit) 58.9
E-value 1.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919692|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_A10.
         (150 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PGD2|A7PGD2_VITVI Chromosome chr6 scaffold_15, whole genome...    59   1e-07
tr|Q0E3X3|Q0E3X3_ORYSJ Os02g0150300 protein (Fragment) OS=Oryza ...    57   4e-07
tr|B7F5J7|B7F5J7_ORYSJ cDNA clone:J013029P18, full insert sequen...    57   4e-07
tr|A3A366|A3A366_ORYSJ Putative uncharacterized protein OS=Oryza...    57   4e-07
tr|A2X0Y1|A2X0Y1_ORYSI Putative uncharacterized protein OS=Oryza...    57   4e-07
tr|B6T7M6|B6T7M6_MAIZE Disulfide oxidoreductase/ electron carrie...    57   5e-07
tr|Q9LXP4|Q9LXP4_ARATH Putative uncharacterized protein F26G5_14...    55   2e-06
tr|Q70AI1|Q70AI1_WHEAT Putative pyridine nucleotide-disulphide o...    55   2e-06
tr|Q9C574|Q9C574_ARATH Putative uncharacterized protein At5g2214...    51   3e-05
tr|Q8GY85|Q8GY85_ARATH Putative uncharacterized protein At5g2214...    51   3e-05
tr|Q3E979|Q3E979_ARATH Uncharacterized protein At5g22140.2 OS=Ar...    51   3e-05
tr|A7QHU0|A7QHU0_VITVI Chromosome undetermined scaffold_100, who...    49   1e-04
tr|A5C5M6|A5C5M6_VITVI Putative uncharacterized protein OS=Vitis...    49   2e-04
tr|Q6UCJ2|Q6UCJ2_CUCSA Pyridine nucleotide-disulphide oxidoreduc...    47   6e-04
tr|Q60D44|Q60D44_SOLDE Putative pyridine nucleotide-disulphide o...    45   0.001
tr|Q2RAB3|Q2RAB3_ORYSJ Os11g0158200 protein OS=Oryza sativa subs...    45   0.001
tr|B8BJ79|B8BJ79_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.001
tr|Q60D61|Q60D61_SOLDE Putative pyridine nucleotide-disulphide o...    40   0.059
tr|Q2GUM2|Q2GUM2_CHAGB Putative uncharacterized protein OS=Chaet...    33   7.2  

>tr|A7PGD2|A7PGD2_VITVI Chromosome chr6 scaffold_15, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00017496001
           PE=4 SV=1
          Length = 368

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 23/48 (47%), Positives = 35/48 (72%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWMQ 2
           V+++L +  NL+SVS  S  Y TS+G++IEADCHF C G  + S+W++
Sbjct: 191 VEVKLEQSVNLNSVSDGSRTYQTSAGETIEADCHFLCTGSPLGSAWLK 238


>tr|Q0E3X3|Q0E3X3_ORYSJ Os02g0150300 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os02g0150300 PE=4 SV=1
          Length = 329

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 22/47 (46%), Positives = 35/47 (74%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWM 5
           VD+   +  +LDS+S +  +Y TS+G+++ ADCHF C+GK +SSSW+
Sbjct: 159 VDVLFQQSIDLDSLSNTEKLYRTSAGETVTADCHFVCIGKPLSSSWL 205


>tr|B7F5J7|B7F5J7_ORYSJ cDNA clone:J013029P18, full insert sequence
           OS=Oryza sativa subsp. japonica PE=2 SV=1
          Length = 308

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 22/47 (46%), Positives = 35/47 (74%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWM 5
           VD+   +  +LDS+S +  +Y TS+G+++ ADCHF C+GK +SSSW+
Sbjct: 138 VDVLFQQSIDLDSLSNTEKLYRTSAGETVTADCHFVCIGKPLSSSWL 184


>tr|A3A366|A3A366_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_005238 PE=4 SV=1
          Length = 357

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 22/47 (46%), Positives = 35/47 (74%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWM 5
           VD+   +  +LDS+S +  +Y TS+G+++ ADCHF C+GK +SSSW+
Sbjct: 187 VDVLFQQSIDLDSLSNTEKLYRTSAGETVTADCHFVCIGKPLSSSWL 233


>tr|A2X0Y1|A2X0Y1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05866 PE=4 SV=1
          Length = 357

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 22/47 (46%), Positives = 35/47 (74%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWM 5
           VD+   +  +LDS+S +  +Y TS+G+++ ADCHF C+GK +SSSW+
Sbjct: 187 VDVLFQQSIDLDSLSNTEKLYRTSAGETVTADCHFVCIGKPLSSSWL 233


>tr|B6T7M6|B6T7M6_MAIZE Disulfide oxidoreductase/ electron carrier/
           oxidoreductase OS=Zea mays PE=2 SV=1
          Length = 358

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 23/47 (48%), Positives = 33/47 (70%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWM 5
           VD+ L +   L S+S +  VY TS G+++ ADCHF C+GK +SSSW+
Sbjct: 188 VDVLLQQSVELGSLSDTEKVYKTSGGETVTADCHFVCIGKPLSSSWL 234


>tr|Q9LXP4|Q9LXP4_ARATH Putative uncharacterized protein F26G5_140
           OS=Arabidopsis thaliana GN=F26G5_140 PE=2 SV=1
          Length = 367

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 22/48 (45%), Positives = 33/48 (68%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWMQ 2
           V++ L+++ +L S S  S  Y TS G++I ADCHF C GK +SS W++
Sbjct: 192 VEVILNQRVDLSSASDGSKTYRTSGGETIHADCHFLCTGKPLSSEWLK 239


>tr|Q70AI1|Q70AI1_WHEAT Putative pyridine nucleotide-disulphide
           oxidoreductase (Fragment) OS=Triticum aestivum PE=2 SV=1
          Length = 206

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 22/47 (46%), Positives = 33/47 (70%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWM 5
           VD+   +  +L S+S +   Y TS+G++I ADCHF C+GK +SSSW+
Sbjct: 36  VDVLFQQSVDLKSLSDTEKFYKTSAGETITADCHFVCIGKPLSSSWL 82


>tr|Q9C574|Q9C574_ARATH Putative uncharacterized protein At5g22140
           OS=Arabidopsis thaliana GN=At5g22140 PE=4 SV=1
          Length = 365

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 21/47 (44%), Positives = 32/47 (68%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWM 5
           V++ L++  +L S S  + +Y TS G++I AD HF CVGK +SS W+
Sbjct: 192 VEVILNQSVDLSSASDGNKIYRTSGGETIHADIHFLCVGKPLSSQWL 238


>tr|Q8GY85|Q8GY85_ARATH Putative uncharacterized protein
           At5g22140/T6G21_250 OS=Arabidopsis thaliana
           GN=At5g22140/T6G21_250 PE=2 SV=1
          Length = 365

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 21/47 (44%), Positives = 32/47 (68%)
 Frame = -3

Query: 145 VDIRLHEKANLDSVSASSHVYTTSSGDSIEADCHFHCVGKKISSSWM 5
           V++ L++  +L S S  + +Y TS G++I AD HF CVGK +SS W+
Sbjct: 192 VEVILNQSVDLSSASDGNKIYRTSGGETIHADIHFLCVGKPLSSQWL 238