BP919713
Clone id YMU001_000128_C09
Library
Length 384
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000128_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AATCAATACGCTCCATGAGATGTCATTTTGGACTATGAGCTCATCAAGTGCTTTCGTAAT
GGCACCACTTTTAGCATGCATAATCTAGCAAGGCATTGCTAAGCACGACATTTAATGCTT
CTCGAGCTTAATCCACTTAGCATATTTATCATCCAAGGCACTGCTAAGCACATCAGTCAT
ATCTTTATTAGCTGGTCATGAAATACAATTCAATTGAAGCACCAGTTAACAGTGCACTGC
AAGAGATGAAATTCCGAACAAGATTCCAATTCCCAAAACCTAACTAAAGCTCAAAATTTC
CCAGATGGCACTCCGTACGAGCCGACTAGACTAATATGGAACCCACCTCCGATGAATTTT
TAACGGCCAATATCTTGGCAACCG
■■Homology search results ■■ -
sp_hit_id Q7MWF4
Definition sp|Q7MWF4|GH109_PORGI Glycosyl hydrolase family 109 protein OS=Porphyromonas gingivalis
Align length 44
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919713|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_C09.
(384 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7MWF4|GH109_PORGI Glycosyl hydrolase family 109 protein OS=P... 31 2.2
sp|Q89ZX8|G1091_BACTN Glycosyl hydrolase family 109 protein 1 OS... 30 3.8
sp|Q7VIW9|HIS5_HELHP Imidazole glycerol phosphate synthase subun... 29 6.3
sp|P0C863|G1091_BACFR Glycosyl hydrolase family 109 protein 1 OS... 29 6.5
sp|Q5LGZ0|G1091_BACFN Glycosyl hydrolase family 109 protein 1 OS... 29 6.5
sp|B0JTA9|NRDR_MICAN Transcriptional repressor nrdR OS=Microcyst... 29 8.2
sp|A6KX96|G1091_BACV8 Glycosyl hydrolase family 109 protein 1 OS... 29 8.4

>sp|Q7MWF4|GH109_PORGI Glycosyl hydrolase family 109 protein
OS=Porphyromonas gingivalis GN=PG_0664 PE=3 SV=2
Length = 468

Score = 30.8 bits (68), Expect = 2.2
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1

Query: 19 DVILDYELIKCFRNGTTFSM--HNLARHC*ARHLMLLELNPLSI 144
D I+DY LI C RNG M ++LA C L EL+ +SI
Sbjct: 401 DYIMDYRLIYCLRNGLPLDMDVYDLAEWC-----CLAELSRISI 439


>sp|Q89ZX8|G1091_BACTN Glycosyl hydrolase family 109 protein 1
OS=Bacteroides thetaiotaomicron GN=BT_4243 PE=3 SV=1
Length = 467

Score = 30.0 bits (66), Expect = 3.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1

Query: 19 DVILDYELIKCFRNGTTFSM--HNLARHC*ARHLMLLELNPLSI 144
D I+DY L+ C RNG M ++LA C + EL LSI
Sbjct: 400 DYIMDYRLVYCLRNGLPLDMDVYDLAEWC-----CMAELTRLSI 438


>sp|Q7VIW9|HIS5_HELHP Imidazole glycerol phosphate synthase subunit
hisH OS=Helicobacter hepaticus GN=hisH PE=3 SV=1
Length = 217

Score = 29.3 bits (64), Expect = 6.3
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2

Query: 314 GVPSGKF*ALVRFWELESCSEFHLLQCTVNWCFN*IVFHDQLIKI 180
G+ G F V + +++ +F L QCT + F IV D L I
Sbjct: 152 GIADGSFFYFVHSFHIQTQPQFILAQCTYGYPFGAIVHKDNLFAI 196


>sp|P0C863|G1091_BACFR Glycosyl hydrolase family 109 protein 1
OS=Bacteroides fragilis GN=BF0931 PE=3 SV=1
Length = 464

Score = 29.3 bits (64), Expect = 6.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1

Query: 19 DVILDYELIKCFRNGTTFSM--HNLARHC*ARHLMLLELNPLSI 144
D I+DY L+ C RNG M ++LA C + +L LSI
Sbjct: 397 DYIMDYRLVYCLRNGLPLDMDVYDLAEWC-----CMADLTKLSI 435


>sp|Q5LGZ0|G1091_BACFN Glycosyl hydrolase family 109 protein 1
OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343)
GN=BF0853 PE=1 SV=1
Length = 464

Score = 29.3 bits (64), Expect = 6.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +1

Query: 19 DVILDYELIKCFRNGTTFSM--HNLARHC*ARHLMLLELNPLSI 144
D I+DY L+ C RNG M ++LA C + +L LSI
Sbjct: 397 DYIMDYRLVYCLRNGLPLDMDVYDLAEWC-----CMADLTKLSI 435


>sp|B0JTA9|NRDR_MICAN Transcriptional repressor nrdR OS=Microcystis
aeruginosa (strain NIES-843) GN=nrdR PE=3 SV=1
Length = 171

Score = 28.9 bits (63), Expect = 8.2
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3

Query: 355 SSEVGSILV*SARTECHLGNFEL*LGFGNWNLVRNFISCSALLTGASIE 209
S E+G +++ R E + +GN+ +R+FI+ ALL + IE
Sbjct: 105 SQEIGQLVLEYLRQESEVAYVRFASVYGNFQGIRDFIAALALLQSSEIE 153


>sp|A6KX96|G1091_BACV8 Glycosyl hydrolase family 109 protein 1
OS=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 /
NCTC 11154) GN=BVU_0340 PE=3 SV=1
Length = 471

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +1

Query: 19 DVILDYELIKCFRNGTTFSM--HNLARHC 99
D I+DY L+ C RNG M ++LA C
Sbjct: 404 DFIMDYRLVYCLRNGLPLDMDVYDLAEWC 432


tr_hit_id Q8YRF6
Definition tr|Q8YRF6|Q8YRF6_ANASP Alr3492 protein OS=Anabaena sp. (strain PCC 7120)
Align length 47
Score (bit) 34.3
E-value 3.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919713|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_C09.
(384 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8YRF6|Q8YRF6_ANASP Alr3492 protein OS=Anabaena sp. (strain P... 34 3.2

>tr|Q8YRF6|Q8YRF6_ANASP Alr3492 protein OS=Anabaena sp. (strain PCC
7120) GN=alr3492 PE=4 SV=1
Length = 414

Score = 34.3 bits (77), Expect = 3.2
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1

Query: 250 NSEQDSNSQNLTKAQNFPDGTP--YEPTRLIWNPPPMNF*RPISWQP 384
N E ++ +++ K N PD TP EP + PP NF +P+S QP
Sbjct: 118 NPEPETLAESPEKTSNSPDSTPSVVEPLSNLPQIPPRNFEKPLSLQP 164