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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919716
Clone id YMU001_000128_C12
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000128_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GAGAGAGCGCAACAAACATTTATCTCGTCAGATGAGTTAAACCCCCTCTCAGTGCAGGGA
GGTGATACAAGAAAGGTTACCTTCAAGGACCCAATGTGCGAAACAGGTTCAAGGAGTCCA
GATTTATGGACTTCATCACGAGGTTAGAAGGTAAAACCAGTTTTCAGGGTTCATCTTATA
TATATAAGGCGGTTTTCTTGACTACACCTTCCGCCATCTTTCGTCCCCCCTGCTTCCTCT
TCTAGCATGGCTCCTTACAGCAGCCCAAGTACGTTGCCCTCCCCCTAGCTTTCCCTTATT
TGCTTCTCTTTTACCCTCGTCTGTATTTTATACACATCTCCTTTAAGGCTTATTGGGATC
CATTTACAGAAATCAAGATCCCTTTCAACAACAGACAGGCTTACATGTCCCTTCAACAGC
AGTCATTGGTCGGTTCATGATCATCAGGTGCTAATTGCTCACAATTTTGTGAAATGTAGT
AATACATCAGATGCTTGGCTTGCAAGAGCTTGTAATATTGATGGTAGAAAAAT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919716|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_C12.
         (533 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id B2ZIC4
Definition tr|B2ZIC4|B2ZIC4_DROSE GR47A (GM21212) (Fragment) OS=Drosophila sechellia
Align length 57
Score (bit) 36.6
E-value 0.83
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919716|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_C12.
         (533 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2ZIC4|B2ZIC4_DROSE GR47A (GM21212) (Fragment) OS=Drosophila ...    37   0.83 
tr|B2ZI80|B2ZI80_DROSI GR47A (Fragment) OS=Drosophila simulans G...    34   4.1  
tr|Q041G0|Q041G0_LACGA Phosphoglycerol transferase related prote...    33   7.0  
tr|B0FE48|B0FE48_DROMA Gr47A (Fragment) OS=Drosophila mauritiana...    33   7.0  
tr|B0FE47|B0FE47_DROMA Gr47A (Fragment) OS=Drosophila mauritiana...    33   7.0  
tr|B0FE46|B0FE46_DROMA Gr47A (Fragment) OS=Drosophila mauritiana...    33   7.0  
tr|B0FE45|B0FE45_DROMA Gr47A (Fragment) OS=Drosophila mauritiana...    33   7.0  
tr|B0FE44|B0FE44_DROMA Gr47A (Fragment) OS=Drosophila mauritiana...    33   7.0  
tr|A2G1X1|A2G1X1_TRIVA Putative uncharacterized protein OS=Trich...    33   7.0  

>tr|B2ZIC4|B2ZIC4_DROSE GR47A (GM21212) (Fragment) OS=Drosophila
           sechellia GN=GM21212 PE=4 SV=1
          Length = 361

 Score = 36.6 bits (83), Expect = 0.83
 Identities = 21/57 (36%), Positives = 30/57 (52%)
 Frame = -2

Query: 268 LGCCKEPC*KRKQGGRKMAEGVVKKTALYI*DEP*KLVLPSNLVMKSINLDSLNLFR 98
           + CC + C ++ QG RK+A G+VK    Y    P  L+L     MK I   S++L R
Sbjct: 78  IACCVKSCWEKAQGIRKLARGLVKMEQKYFAGRPSGLLLKLRYYMK-ITFGSISLLR 133


>tr|B2ZI80|B2ZI80_DROSI GR47A (Fragment) OS=Drosophila simulans
           GN=Gr47A PE=4 SV=1
          Length = 361

 Score = 34.3 bits (77), Expect = 4.1
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 268 LGCCKEPC*KRKQGGRKMAEGVVKKTALYI*DEP*KLVLPSNLVMKSINLDSLNLFR 98
           + CC + C ++ QG RK+A G+V     Y    P  L+L     MK I   S+ L R
Sbjct: 78  MACCVKSCWEKAQGIRKLARGLVNMEQKYFAGRPSGLLLKFRYYMK-ITFGSITLLR 133


>tr|Q041G0|Q041G0_LACGA Phosphoglycerol transferase related protein,
           alkaline phosphatase superfamily OS=Lactobacillus
           gasseri (strain ATCC 33323 / DSM 20243) GN=LGAS_1586
           PE=4 SV=1
          Length = 689

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 127 INLDSLNLFRTLGP*R*PFLYHLPALRGGLTH 32
           +N DS N F  L   R P ++H+P L+GG+ H
Sbjct: 497 LNKDSFNNFDNLQFQRVPLMFHMPGLKGGINH 528


>tr|B0FE48|B0FE48_DROMA Gr47A (Fragment) OS=Drosophila mauritiana
           GN=Gr47A PE=4 SV=1
          Length = 361

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 268 LGCCKEPC*KRKQGGRKMAEGVVKKTALYI*DEP*KLVLPSNLVMKSINLDSLNLFR 98
           + CC + C ++ QG RK+A G+V     Y    P  L+L     MK I   S+ L R
Sbjct: 78  MACCVKSCWEKAQGIRKLARGLVNMEQKYFAGRPSGLLLKFRYYMK-ITFCSITLLR 133


>tr|B0FE47|B0FE47_DROMA Gr47A (Fragment) OS=Drosophila mauritiana
           GN=Gr47A PE=4 SV=1
          Length = 361

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 268 LGCCKEPC*KRKQGGRKMAEGVVKKTALYI*DEP*KLVLPSNLVMKSINLDSLNLFR 98
           + CC + C ++ QG RK+A G+V     Y    P  L+L     MK I   S+ L R
Sbjct: 78  MACCVKSCWEKAQGIRKLARGLVNMEQKYFAGRPSGLLLKFRYYMK-ITFCSITLLR 133


>tr|B0FE46|B0FE46_DROMA Gr47A (Fragment) OS=Drosophila mauritiana
           GN=Gr47A PE=4 SV=1
          Length = 361

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 268 LGCCKEPC*KRKQGGRKMAEGVVKKTALYI*DEP*KLVLPSNLVMKSINLDSLNLFR 98
           + CC + C ++ QG RK+A G+V     Y    P  L+L     MK I   S+ L R
Sbjct: 78  MACCVKSCWEKAQGIRKLARGLVNMEQKYFAGRPSGLLLKFRYYMK-ITFCSITLLR 133


>tr|B0FE45|B0FE45_DROMA Gr47A (Fragment) OS=Drosophila mauritiana
           GN=Gr47A PE=4 SV=1
          Length = 361

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 268 LGCCKEPC*KRKQGGRKMAEGVVKKTALYI*DEP*KLVLPSNLVMKSINLDSLNLFR 98
           + CC + C ++ QG RK+A G+V     Y    P  L+L     MK I   S+ L R
Sbjct: 78  MACCVKSCWEKAQGIRKLARGLVNMEQKYFAGRPSGLLLKFRYYMK-ITFCSITLLR 133


>tr|B0FE44|B0FE44_DROMA Gr47A (Fragment) OS=Drosophila mauritiana
           GN=Gr47A PE=4 SV=1
          Length = 361

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 20/57 (35%), Positives = 28/57 (49%)
 Frame = -2

Query: 268 LGCCKEPC*KRKQGGRKMAEGVVKKTALYI*DEP*KLVLPSNLVMKSINLDSLNLFR 98
           + CC + C ++ QG RK+A G+V     Y    P  L+L     MK I   S+ L R
Sbjct: 78  MACCVKSCWEKAQGIRKLARGLVNMEQKYFAGRPSGLLLKFRYYMK-ITFCSITLLR 133


>tr|A2G1X1|A2G1X1_TRIVA Putative uncharacterized protein
           OS=Trichomonas vaginalis G3 GN=TVAG_049040 PE=4 SV=1
          Length = 398

 Score = 33.5 bits (75), Expect = 7.0
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +3

Query: 72  KGYLQGPNVRNRFKESRFMDFITRLEGKTSFQGSSYIYKAVFLTTPSAIFRPP 230
           +GY + P++  ++ E  F+DF T   GK +   ++Y   +        + RPP
Sbjct: 56  EGYFEKPSIVPKYGEKNFIDFYTNFHGKIAIYKNAYACGSGEFVINEYVIRPP 108