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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919721
Clone id YMU001_000128_D05
Library
Length 520
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000128_D05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATCTAGAGGAAGCGGCTCAATAAATAGAGGTTAACAATACATTCGTTCACCGTACAGAGA
ATCTAGACTTCAAGCAAATATCTCACTGCTTTAACACATACTCTTTCAACAAAACCTTCC
ATAATCATGACCAATTAGCACAAACTTGAGTGCATGTTATACAGAGCAATTGTCATGCCA
ACACTTCTGCCTCCCAGGGTGACACCACCAAAACATTAACTGTCAAACACTACTCATGTT
GTTGCTCTGCTGCTGTCATTCGTCCAGCTTTCAAACAAATTCTCCACTGGCTGTCAGTTG
ACATTTTCGCTAAAGATACTAGAGACCCAGCAGCAATAACAACACTAATCTCCGGCAACC
TTCCAAACATTAAAATCGTTACATCCACTTGGTTTCCATACAACGATCCATTTGCAGTCG
TAAATTTGCATTGAGCAACCTGTATGCCTCAATTCTGGGAGTAAGACGACAGCAAAGATT
GTTGAAAAATCTTTAGTGCACAGCTCTATTGAGTTTTTAA
■■Homology search results ■■ -
sp_hit_id Q0H8Y9
Definition sp|Q0H8Y9|NU2M_USTMA NADH-ubiquinone oxidoreductase chain 2 OS=Ustilago maydis
Align length 72
Score (bit) 30.8
E-value 4.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919721|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_D05.
         (520 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q0H8Y9|NU2M_USTMA NADH-ubiquinone oxidoreductase chain 2 OS=U...    31   4.0  
sp|O23976|C76B1_HELTU 7-ethoxycoumarin O-deethylase OS=Helianthu...    30   6.8  

>sp|Q0H8Y9|NU2M_USTMA NADH-ubiquinone oxidoreductase chain 2
           OS=Ustilago maydis GN=ND2 PE=3 SV=1
          Length = 538

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 21/72 (29%), Positives = 35/72 (48%)
 Frame = +1

Query: 46  FTVQRI*TSSKYLTALTHTLSTKPSIIMTN*HKLECMLYRAIVMPTLLPPRVTPPKH*LS 225
           F  Q   T   Y +A THT+++  +  +TN H L       I++  +L P +      L 
Sbjct: 472 FDSQDTQTDIVYTSASTHTVNSSDTPTITNVHSLLISSLTMIIVLFVLQPSI------LL 525

Query: 226 NTTHVVALLLSF 261
           N+ H++AL L +
Sbjct: 526 NSCHILALSLFY 537


>sp|O23976|C76B1_HELTU 7-ethoxycoumarin O-deethylase OS=Helianthus
           tuberosus GN=CYP76B1 PE=1 SV=1
          Length = 490

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
 Frame = +3

Query: 156 VIQSNCHANTSASQGDTTKTLTVKHYSCCCSAAVI--------RPAFKQILHWLSVDIFA 311
           ++ SN  +N+S       ++  V+     C  A +        R AF+  L+ LS  IF+
Sbjct: 126 IVSSNIFSNSSLEAKQHLRSKKVEELIAYCRKAALSNENVHIGRAAFRTSLNLLSNTIFS 185

Query: 312 KDTRDP 329
           KD  DP
Sbjct: 186 KDLTDP 191
tr_hit_id Q8T2W6
Definition tr|Q8T2W6|Q8T2W6_TRYCR Tcc1i14-1.1 OS=Trypanosoma cruzi
Align length 46
Score (bit) 35.4
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919721|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_D05.
         (520 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q8T2W6|Q8T2W6_TRYCR Tcc1i14-1.1 OS=Trypanosoma cruzi GN=Tcc1i...    35   1.7  
tr|Q7SCR6|Q7SCR6_NEUCR Putative uncharacterized protein OS=Neuro...    34   3.8  
tr|Q4D7N8|Q4D7N8_TRYCR Retrotransposon hot spot (RHS) protein, p...    33   6.5  

>tr|Q8T2W6|Q8T2W6_TRYCR Tcc1i14-1.1 OS=Trypanosoma cruzi
           GN=Tcc1i14-1.1 PE=4 SV=1
          Length = 913

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
 Frame = -3

Query: 215 CFGGVTLGGR--SVGMTIALYNMHSSLC*LVMIMEGFVERVCVKAV 84
           CF  + L GR  S+ + + LY  + S+C LV+   GF  RVC K++
Sbjct: 54  CFVSIALSGRPLSLPLCVLLYGSNESVCALVVPRLGFPSRVCFKSL 99


>tr|Q7SCR6|Q7SCR6_NEUCR Putative uncharacterized protein OS=Neurospora
            crassa GN=NCU09367 PE=4 SV=1
          Length = 1948

 Score = 34.3 bits (77), Expect = 3.8
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = +3

Query: 264  PAFKQILHWLSVDIFAKDTRDPAAITTLISGNLP 365
            P  KQ + WL ++  AK  ++P A+ TL+ G+LP
Sbjct: 1413 PRVKQEVRWLLLNFPAKAIKEPEAVATLVDGSLP 1446


>tr|Q4D7N8|Q4D7N8_TRYCR Retrotransposon hot spot (RHS) protein,
           putative OS=Trypanosoma cruzi GN=Tc00.1047053503447.40
           PE=4 SV=1
          Length = 682

 Score = 33.5 bits (75), Expect = 6.5
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
 Frame = +3

Query: 171 CHANTSASQGDTTKTLTVKHYSCCCSAAVIRPAFKQILHWL---SVDIFAKDTRDP 329
           C      +  +  K L  KH S     ++  P  K+I+HW+   S+D F ++ R+P
Sbjct: 78  CTVKGEVNMEEDVKKLHYKHVSTLLGWSLATPEVKEIVHWITKESLDAFLEEVRNP 133