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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919723
Clone id YMU001_000128_D07
Library
Length 291
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000128_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATAAAGAATACGTGAATTTGAATTATTGTATGGGTATCAAAAGAAGGGTCTAGCTACAAA
AATTAATGGCGAAACAAAAAAATCAAGAATTGGTGATTTGAACCCAGGACGCAGCAGCAC
TGGGGATTCCCTGGTTGTCAACAAACAGCATGTAATAGGCCGGGGGTGCCACGTTGGAGT
TTGGTGGGGCAGTTACGTTAACAGAGTAGGAGGAGGTAGAGCTGTCGCCCCCACTGATGA
GTACCTGCCCAACCAGGCGTAGTCGCAGGAAACGGAGTCCCTGCGAGAAGG
■■Homology search results ■■ -
sp_hit_id Q01745
Definition sp|Q01745|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae
Align length 28
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919723|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_D07.
         (291 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q01745|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae GN=GAO...    31   2.2  
sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens GN=...    29   6.3  
sp|A6LQX4|Y567_CLOB8 UPF0229 protein Cbei_0567 OS=Clostridium be...    29   8.2  

>sp|Q01745|GAOA_GIBZE Galactose oxidase OS=Gibberella zeae GN=GAOA
           PE=1 SV=1
          Length = 680

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
 Frame = -3

Query: 187 PPNSNVAPPAYYMLFVDNQ-GIPSAAAS 107
           P +S VA P Y+MLFV N  G+PS A++
Sbjct: 648 PSDSGVALPGYWMLFVMNSAGVPSVAST 675


>sp|P07942|LAMB1_HUMAN Laminin subunit beta-1 OS=Homo sapiens
           GN=LAMB1 PE=1 SV=1
          Length = 1786

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 118 HWGFPGCQQTACN 156
           HWGFP CQ   CN
Sbjct: 858 HWGFPSCQPCQCN 870


>sp|A6LQX4|Y567_CLOB8 UPF0229 protein Cbei_0567 OS=Clostridium
           beijerinckii (strain ATCC 51743 / NCIMB 8052)
           GN=Cbei_0567 PE=3 SV=1
          Length = 390

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 10/32 (31%), Positives = 21/32 (65%)
 Frame = +2

Query: 8   IREFELLYGYQKKGLATKINGETKKSRIGDLN 103
           I+E++ +YG   KG+A+ +  E +  ++G+ N
Sbjct: 61  IKEYQFVYGKNSKGVASGVGNEKRGEKLGNGN 92
tr_hit_id A9T033
Definition tr|A9T033|A9T033_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 68
Score (bit) 53.9
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919723|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_D07.
         (291 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T033|A9T033_PHYPA Predicted protein OS=Physcomitrella paten...    54   4e-06
tr|A9TC21|A9TC21_PHYPA Predicted protein OS=Physcomitrella paten...    53   9e-06
tr|A9S707|A9S707_PHYPA Predicted protein OS=Physcomitrella paten...    52   2e-05
tr|Q9M332|Q9M332_ARATH Putative uncharacterized protein F5K20_25...    50   4e-05
tr|A9S8Q7|A9S8Q7_PHYPA Predicted protein OS=Physcomitrella paten...    48   2e-04
tr|Q9M9S1|Q9M9S1_ARATH F14L17.20 protein OS=Arabidopsis thaliana...    47   5e-04
tr|Q3HRQ2|Q3HRQ2_9MAGN Glyoxal oxidase OS=Vitis pseudoreticulata...    47   5e-04
tr|A7PNV4|A7PNV4_VITVI Chromosome chr8 scaffold_23, whole genome...    47   5e-04
tr|A5AHA0|A5AHA0_VITVI Putative uncharacterized protein OS=Vitis...    47   5e-04
tr|A9FFW0|A9FFW0_SORC5 Putative uncharacterized protein OS=Soran...    47   6e-04
tr|A9SED3|A9SED3_PHYPA Predicted protein OS=Physcomitrella paten...    46   0.001
tr|B6TPV2|B6TPV2_MAIZE Glyoxal oxidase OS=Zea mays PE=2 SV=1           45   0.002
tr|Q8RY19|Q8RY19_ARATH AT5g19580/T20D1_100 (Putative uncharacter...    45   0.002
tr|A7P594|A7P594_VITVI Chromosome chr4 scaffold_6, whole genome ...    45   0.002
tr|A9S9F5|A9S9F5_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.003
tr|A9T670|A9T670_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.004
tr|A8L6C2|A8L6C2_FRASN Putative uncharacterized protein OS=Frank...    44   0.005
tr|A9SU57|A9SU57_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.005
tr|A9RBA0|A9RBA0_PHYPA Predicted protein (Fragment) OS=Physcomit...    44   0.005
tr|Q1D1Q6|Q1D1Q6_MYXXD Kelch domain protein OS=Myxococcus xanthu...    43   0.009
tr|Q9SVX6|Q9SVX6_ARATH Putative uncharacterized protein F15B8.19...    43   0.009
tr|Q8S198|Q8S198_ORYSJ cDNA clone:002-120-B11, full insert seque...    42   0.012
tr|Q53JH2|Q53JH2_ORYSJ Glyoxal oxidase N-terminus family protein...    42   0.012
tr|B8A7N6|B8A7N6_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.012
tr|A9TF14|A9TF14_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.012
tr|A9T6J0|A9T6J0_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.012
tr|A3C910|A3C910_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.012
tr|A2ZWH6|A2ZWH6_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.012
tr|A2ZBW3|A2ZBW3_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.012
tr|A9RYW1|A9RYW1_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.015

>tr|A9T033|A9T033_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_190327 PE=4 SV=1
          Length = 550

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 28/68 (41%), Positives = 38/68 (55%)
 Frame = -3

Query: 289 FSQGLRFLRLRLVGQVLIXXXXXXXXXXSVNVTAPPNSNVAPPAYYMLFVDNQGIPSAAA 110
           +SQG R + L + G V +           V  TAPP+  VAPP YYMLF  NQ +PS A 
Sbjct: 487 YSQGQRLVSLNVAGSVQVAQASVYQ----VTATAPPSPQVAPPGYYMLFAVNQRVPSTAV 542

Query: 109 SWVQITNS 86
            W+++ +S
Sbjct: 543 -WIRVASS 549


>tr|A9TC21|A9TC21_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_169254 PE=4 SV=1
          Length = 551

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 25/36 (69%), Positives = 27/36 (75%)
 Frame = -3

Query: 202 VNVTAPPNSNVAPPAYYMLFVDNQGIPSAAASWVQI 95
           + VTAPPNSNVAPP YYM F+ N GIP   A WVQI
Sbjct: 515 IAVTAPPNSNVAPPQYYMFFIVNGGIP-GKARWVQI 549


>tr|A9S707|A9S707_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_57034 PE=4 SV=1
          Length = 529

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 27/64 (42%), Positives = 38/64 (59%)
 Frame = -3

Query: 289 FSQGLRFLRLRLVGQVLIXXXXXXXXXXSVNVTAPPNSNVAPPAYYMLFVDNQGIPSAAA 110
           +SQG R + L + G V +           + VTAPP+ +VAPP YYM+   NQG+PS+A 
Sbjct: 466 YSQGQRLVSLNVGGIVQVAQASVYQ----ITVTAPPSPSVAPPGYYMMVAVNQGVPSSAV 521

Query: 109 SWVQ 98
            W+Q
Sbjct: 522 -WIQ 524


>tr|Q9M332|Q9M332_ARATH Putative uncharacterized protein F5K20_250
           OS=Arabidopsis thaliana GN=F5K20_250 PE=2 SV=1
          Length = 545

 Score = 50.4 bits (119), Expect = 4e-05
 Identities = 27/67 (40%), Positives = 36/67 (53%)
 Frame = -3

Query: 289 FSQGLRFLRLRLVGQVLIXXXXXXXXXXSVNVTAPPNSNVAPPAYYMLFVDNQGIPSAAA 110
           FSQG R ++L +   V             +  TAPPN  V+PP YYM F  NQG+PS  A
Sbjct: 485 FSQGQRLVKLTVAPSV-----PDGVGRYRIQCTAPPNGAVSPPGYYMAFAVNQGVPS-IA 538

Query: 109 SWVQITN 89
            W++I +
Sbjct: 539 RWIRIVS 545


>tr|A9S8Q7|A9S8Q7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_209785 PE=4 SV=1
          Length = 520

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 23/34 (67%), Positives = 25/34 (73%)
 Frame = -3

Query: 196 VTAPPNSNVAPPAYYMLFVDNQGIPSAAASWVQI 95
           VTAPP+  VAPP YYMLFV N GIP  A  WVQ+
Sbjct: 486 VTAPPSMTVAPPQYYMLFVVNGGIPGKAV-WVQV 518


>tr|Q9M9S1|Q9M9S1_ARATH F14L17.20 protein OS=Arabidopsis thaliana
           GN=F14L17.20 PE=4 SV=1
          Length = 564

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 28/64 (43%), Positives = 37/64 (57%)
 Frame = -3

Query: 286 SQGLRFLRLRLVGQVLIXXXXXXXXXXSVNVTAPPNSNVAPPAYYMLFVDNQGIPSAAAS 107
           +Q L  LR+R V Q+ +            +V  P NS VAPP YYM+FV ++GIPS A  
Sbjct: 509 NQRLLVLRVRRVSQLSVFAYK-------ADVDGPTNSYVAPPGYYMMFVVHRGIPSVAV- 560

Query: 106 WVQI 95
           WV+I
Sbjct: 561 WVKI 564


>tr|Q3HRQ2|Q3HRQ2_9MAGN Glyoxal oxidase OS=Vitis pseudoreticulata
           PE=2 SV=1
          Length = 523

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 26/65 (40%), Positives = 34/65 (52%)
 Frame = -3

Query: 289 FSQGLRFLRLRLVGQVLIXXXXXXXXXXSVNVTAPPNSNVAPPAYYMLFVDNQGIPSAAA 110
           FSQG R ++L +   V             +  TAPP   +APP YYM+F  N G+PS  A
Sbjct: 463 FSQGQRLVKLTVSPTV-----PDADERYRIVCTAPPGGKIAPPGYYMMFAVNLGVPS-VA 516

Query: 109 SWVQI 95
            WVQ+
Sbjct: 517 RWVQL 521


>tr|A7PNV4|A7PNV4_VITVI Chromosome chr8 scaffold_23, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021405001
           PE=4 SV=1
          Length = 523

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 26/65 (40%), Positives = 34/65 (52%)
 Frame = -3

Query: 289 FSQGLRFLRLRLVGQVLIXXXXXXXXXXSVNVTAPPNSNVAPPAYYMLFVDNQGIPSAAA 110
           FSQG R ++L +   V             +  TAPP   +APP YYM+F  N G+PS  A
Sbjct: 463 FSQGQRLVKLTVSPTV-----PDADERYRIVCTAPPGGKIAPPGYYMMFAVNLGVPS-VA 516

Query: 109 SWVQI 95
            WVQ+
Sbjct: 517 RWVQL 521


>tr|A5AHA0|A5AHA0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_024374 PE=4 SV=1
          Length = 467

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 26/65 (40%), Positives = 34/65 (52%)
 Frame = -3

Query: 289 FSQGLRFLRLRLVGQVLIXXXXXXXXXXSVNVTAPPNSNVAPPAYYMLFVDNQGIPSAAA 110
           FSQG R ++L +   V             +  TAPP   +APP YYM+F  N G+PS  A
Sbjct: 407 FSQGQRLVKLTVSPTV-----PDABERYRIVCTAPPGGKIAPPGYYMMFAVNLGVPS-VA 460

Query: 109 SWVQI 95
            WVQ+
Sbjct: 461 RWVQL 465


>tr|A9FFW0|A9FFW0_SORC5 Putative uncharacterized protein
           OS=Sorangium cellulosum (strain So ce56) GN=sce4871 PE=4
           SV=1
          Length = 858

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -3

Query: 289 FSQGLRFLRLRLVGQVLIXXXXXXXXXXSVNVTAPPNSNVAPPAYYMLF-VDNQGIPSAA 113
           F Q  R ++L + GQ             ++ +TAPPN  VAPP YYMLF V  QG+PS A
Sbjct: 803 FDQSQRAVKLAITGQ----------SGSTLTLTAPPNGKVAPPGYYMLFVVSTQGVPSVA 852