BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919727|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_D12.
         (284 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6ZPF3|TIAM2_MOUSE T-lymphoma invasion and metastasis-inducin...    31   2.2  
sp|P14348|VP26_EBV Capsid protein VP26 OS=Epstein-Barr virus (st...    29   6.3  
sp|Q9RJ20|COBQ_STRCO Cobyric acid synthase OS=Streptomyces coeli...    29   8.3  

>sp|Q6ZPF3|TIAM2_MOUSE T-lymphoma invasion and metastasis-inducing
            protein 2 OS=Mus musculus GN=Tiam2 PE=1 SV=2
          Length = 1715

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -2

Query: 259  PVSSNSFDARKAEGVGESI*FVWPFKHCKGNSKETDKC 146
            PVS+    +R  +G+  S    WP +  KGNS ++D+C
Sbjct: 1505 PVSAKLASSRSLKGLRTSSSSEWPSEPSKGNSLDSDEC 1542


>sp|P14348|VP26_EBV Capsid protein VP26 OS=Epstein-Barr virus
           (strain B95-8) GN=BFRF3 PE=4 SV=1
          Length = 176

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = -3

Query: 213 EKVSDLFGLSSTAKEIPRRRTNAINGASAHSQLGESRRNLACQSFAGGNKG 61
           E V   FG+    + I +R+  ++ GA AH+ LG S      Q+ A  + G
Sbjct: 59  EYVQRTFGVPRRQRAIDKRQRASVAGAGAHAHLGGSSATPVQQAQAAASAG 109


>sp|Q9RJ20|COBQ_STRCO Cobyric acid synthase OS=Streptomyces
           coelicolor GN=cobQ PE=3 SV=1
          Length = 502

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = -1

Query: 179 LQRKFQGDGQM--P*MELLHTLSSVRAEGILPVNH 81
           L  KF+GD  +  P +++LH L+  R  G+LP  H
Sbjct: 195 LVNKFRGDVSLLEPGLDMLHGLTGRRTYGVLPFRH 229

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919727|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_D12.
         (284 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4D1V9|A4D1V9_HUMAN Similar to bA145E8.1 (KIAA1074) OS=Homo s...    33   7.2  

>tr|A4D1V9|A4D1V9_HUMAN Similar to bA145E8.1 (KIAA1074) OS=Homo
           sapiens GN=LOC254750 PE=4 SV=1
          Length = 137

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -3

Query: 267 EMSQSPQTVLTLERQKG-WEKVSDLFGLSSTAKEIPRRRTN 148
           E+S++ +T L LE +KG WE+  + + L  T KE  +RR +
Sbjct: 39  ELSEAKETQLQLEHEKGQWEQEQERYSLRMTLKEEEKRRND 79