BP919738
Clone id YMU001_000128_E11
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000128_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AATTCGCGGCCGCGAATCCTCAGGCCTCTTTCCATTCTGTTCAGTAATGCTTGGCATAAA
GCATTTGAAACTTCATTGCAGTCTTTTGAGATTATCCAAAGCCCTGAAGCAAGGACTTTA
AGTCCTACAAGCAAAGATTGTGATGCCGGATTGATAGTTTCAACACGCCCAGGAAGGAAG
AGCCACAGTTTGATAAGAGATCCTTCATTTGTCCCTGAAAAGTCACTACATGTCCAAGCA
CTAAAATAGCCTTCATTCTGAAGCAATGTGTGTGCAACCAGCACTCTATTGGTGACGCGG
CCCTCAGACCACTTCTCAGGTGGTGCATTATCGCCATCTGCAGATATTAATTGGAACCAC
GAGATCTGCCTGAATCCCAGTCTATAGACGTTGGTCAGCATATCAATCTACAACCACTGG
ATCAGGTGTTTCAGCATCACGCCAGCGAAGCTCGAGGCAATCTTGAAGTTGATTATTACC
AAATACACTCTTTCCATTAGTGTAAGAACAACTTGGTGATGATGG
■■Homology search results ■■ -
sp_hit_id P80651
Definition sp|P80651|MTRE_METMA Tetrahydromethanopterin S-methyltransferase subunit E OS=Methanosarcina mazei
Align length 67
Score (bit) 34.3
E-value 0.35
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919738|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_E11.
(508 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P80651|MTRE_METMA Tetrahydromethanopterin S-methyltransferase... 34 0.35
sp|Q08465|YNG1_YEAST Protein YNG1 OS=Saccharomyces cerevisiae GN... 30 5.0
sp|Q5VV67|PPRC1_HUMAN Peroxisome proliferator-activated receptor... 30 5.0
sp|Q12VU4|MTRE_METBU Tetrahydromethanopterin S-methyltransferase... 30 5.0

>sp|P80651|MTRE_METMA Tetrahydromethanopterin S-methyltransferase
subunit E OS=Methanosarcina mazei GN=mtrE PE=1 SV=2
Length = 304

Score = 34.3 bits (77), Expect = 0.35
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = -2

Query: 273 NRVLVAHTLLQNEGYFSAWTCSDFSGTNEGSLIKLWLFLPGRVETINPASQSLLVGLKVL 94
N V A + L+N G+ ++W CS F G G + +FL + TI +Q L +G +
Sbjct: 208 NIVRYAESGLRN-GFDNSWFCSKFGGPTTGIAFGMTVFLGSWITTIFDPAQGLSMGWLSV 266

Query: 93 ASGLWII 73
+G+ I+
Sbjct: 267 IAGVIIV 273


>sp|Q08465|YNG1_YEAST Protein YNG1 OS=Saccharomyces cerevisiae
GN=YNG1 PE=1 SV=1
Length = 219

Score = 30.4 bits (67), Expect = 5.0
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2

Query: 111 VGLKVLASGLWIISKDCNEVSN 46
VGLK G W SKDC E++N
Sbjct: 186 VGLKQAPKGKWYCSKDCKEIAN 207


>sp|Q5VV67|PPRC1_HUMAN Peroxisome proliferator-activated receptor
gamma coactivator-related protein 1 OS=Homo sapiens
GN=PPRC1 PE=1 SV=1
Length = 1664

Score = 30.4 bits (67), Expect = 5.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2

Query: 71 EIIQSPEARTLSPTSKDCDAGLIVSTRPGRKSHSLIRDPSFVPEKSL 211
EI+ + ++ LSP D+ L+VS R G H L+ PE+ L
Sbjct: 133 EILDNADSENLSPFDSIPDSELLVSPREGSSLHKLLTLSRTPPERDL 179


>sp|Q12VU4|MTRE_METBU Tetrahydromethanopterin S-methyltransferase
subunit E OS=Methanococcoides burtonii (strain DSM 6242)
GN=mtrE PE=3 SV=1
Length = 301

Score = 30.4 bits (67), Expect = 5.0
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -2

Query: 273 NRVLVAHTLLQNEGYFSAWTCSDFSGTNEGSLIKLWLFLPGRVETINPASQSLLVGLKVL 94
N V A + L+N G ++W C+ F G G + +FL G V + + SL +G +
Sbjct: 207 NIVRKAESGLRN-GIDNSWFCAKFGGPVTGLAFGMTVFLSGWVTAVFNPAISLTMGWLSV 265

Query: 93 ASGLWII 73
A+G+ ++
Sbjct: 266 AAGVILV 272


tr_hit_id A7P086
Definition tr|A7P086|A7P086_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera
Align length 141
Score (bit) 90.1
E-value 5.0e-17
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919738|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_E11.
(508 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7P086|A7P086_VITVI Chromosome chr6 scaffold_3, whole genome ... 90 5e-17
tr|A5BD66|A5BD66_VITVI Putative uncharacterized protein OS=Vitis... 86 1e-15
tr|A9RVI0|A9RVI0_PHYPA Predicted protein OS=Physcomitrella paten... 82 1e-14
tr|Q9C8A3|Q9C8A3_ARATH Acetyl-CoA synthetase, putative; 45051-31... 69 1e-10
tr|B8AYR9|B8AYR9_ORYSI Putative uncharacterized protein OS=Oryza... 55 2e-06
tr|Q0DHR5|Q0DHR5_ORYSJ Os05g0447500 protein OS=Oryza sativa subs... 53 1e-05
tr|Q9XUM2|Q9XUM2_CAEEL Protein W04A8.3, partially confirmed by t... 34 4.6
tr|B1HYL3|B1HYL3_LYSSC Spore germination protein KC OS=Lysinibac... 33 8.0
tr|Q4N9P5|Q4N9P5_THEPA Putative uncharacterized protein OS=Theil... 33 8.0

>tr|A7P086|A7P086_VITVI Chromosome chr6 scaffold_3, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00024811001
PE=4 SV=1
Length = 1077

Score = 90.1 bits (222), Expect = 5e-17
Identities = 59/141 (41%), Positives = 75/141 (53%), Gaps = 14/141 (9%)
Frame = -2

Query: 384 MLTNVYRLG-FRQISWFQLISADGDNAPPEKWS-----EGRVTNRVLVAHTLLQNEGYFS 223
M TNV+++G ISWFQ + + D PP S + T VL H LQ EG+ S
Sbjct: 1 MWTNVFKIGGLHHISWFQFLPHESDLNPPNDKSVKVEQKDPATLVVLSTHLQLQREGFLS 60

Query: 222 AWTCSDFSGT--------NEGSLIKLWLFLPGRVETINPASQSLLVGLKVLASGLWIISK 67
WT S F G N IKLWLFLPGR ++ A+Q + L+V+ASG W+
Sbjct: 61 TWTNS-FVGPWDPSQGLHNPDEKIKLWLFLPGRHSSVAEAAQVAVSRLRVVASGFWLAPG 119

Query: 66 DCNEVSNALCQALLNRMERGL 4
D EV+ AL QAL N +ER L
Sbjct: 120 DSEEVAAALSQALRNCIERAL 140


>tr|A5BD66|A5BD66_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_024992 PE=4 SV=1
Length = 1154

Score = 85.9 bits (211), Expect = 1e-15
Identities = 54/127 (42%), Positives = 69/127 (54%), Gaps = 8/127 (6%)
Frame = -2

Query: 360 GFRQISWFQLISADGDNAPPEKWS-----EGRVTNRVLVAHTLLQNEGYFSAWTCSDFSG 196
G ISWFQ + + D PP S + T VL H LQ EG+ S WT S F G
Sbjct: 9 GLHHISWFQFLPHESDLNPPNDKSVKVEQKDPATLVVLSXHLQLQREGFLSTWTNS-FVG 67

Query: 195 T---NEGSLIKLWLFLPGRVETINPASQSLLVGLKVLASGLWIISKDCNEVSNALCQALL 25
++ IKLWLFLPGR ++ A+Q + L+V+ASG W+ D EV+ AL QAL
Sbjct: 68 PWDPSQDEKIKLWLFLPGRHSSVAEAAQVAVSRLRVVASGFWLAPGDSEEVAAALSQALR 127

Query: 24 NRMERGL 4
N +ER L
Sbjct: 128 NCIERAL 134


>tr|A9RVI0|A9RVI0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_161291 PE=4 SV=1
Length = 2216

Score = 82.4 bits (202), Expect = 1e-14
Identities = 45/104 (43%), Positives = 61/104 (58%)
Frame = -2

Query: 312 NAPPEKWSEGRVTNRVLVAHTLLQNEGYFSAWTCSDFSGTNEGSLIKLWLFLPGRVETIN 133
+A E+ + +V+ AH LQ G S+WT SD S +KLWLFLPGR + +N
Sbjct: 68 SALEERSQQDVAAMQVIRAHMWLQEAGTLSSWTLSD-------SKVKLWLFLPGRHDGLN 120

Query: 132 PASQSLLVGLKVLASGLWIISKDCNEVSNALCQALLNRMERGLR 1
P + + GLKV+ SGLW +C EV AL QAL NR+E+G +
Sbjct: 121 PRVHAAVAGLKVVGSGLWRAPGECTEVGFALDQALRNRIEKGFQ 164


>tr|Q9C8A3|Q9C8A3_ARATH Acetyl-CoA synthetase, putative; 45051-31547
OS=Arabidopsis thaliana GN=F7A10.14 PE=1 SV=1
Length = 2655

Score = 69.3 bits (168), Expect = 1e-10
Identities = 52/157 (33%), Positives = 71/157 (45%), Gaps = 36/157 (22%)
Frame = -2

Query: 366 RLGFRQISWFQLISADGDNAPPEKWSEGRVTNRV-----LVAHTLLQNEGYFSAWTCSDF 202
R G +SWFQ + ++ + P S N V L +H LQ EG+ + WT S F
Sbjct: 708 RGGLHNVSWFQFLPSETELNPGFDRSSRAEQNEVATYLVLSSHLRLQKEGFLTTWTNS-F 766

Query: 201 SGT--------NEGSLIKLWLFLPGRVETINPASQS-----------------------L 115
G N IKLWLFLPGR +I+ +Q+ L
Sbjct: 767 VGPWDPSQGLYNPDEKIKLWLFLPGRHSSISDKAQAAVSKLRVNMPVVYGYLGILVLTFL 826

Query: 114 LVGLKVLASGLWIISKDCNEVSNALCQALLNRMERGL 4
+ LKV+ASG+W+ D E+S A Q+L N +ER L
Sbjct: 827 FLLLKVVASGIWVAPGDSEEISVAFSQSLRNCIERAL 863


>tr|B8AYR9|B8AYR9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_20152 PE=4 SV=1
Length = 2010

Score = 55.5 bits (132), Expect = 2e-06
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
Frame = -2

Query: 354 RQISWFQLISADGDNAPPEKWS-----EGRVTNRVLVAHTLLQNEGYFSAWTCSDFSGTN 190
+ +SWFQ + + D + + S + + N VL AH LQ+EG+ S WT
Sbjct: 168 QNVSWFQFLPVEPDPSTASERSSKAEQKDALNNIVLSAHLHLQSEGFLSTWT-------- 219

Query: 189 EGSLIKLWLFLPGRVETINPASQSLLVGLKVLASGLWIISKDCNEVSNALCQALLNRMER 10
S + W P + E NP V+++GLW+ + EV+ ALCQAL N +ER
Sbjct: 220 -NSFVGPWD--PSQGEH-NP----------VVSNGLWVAPGNLEEVAAALCQALRNSLER 265

Query: 9 GLR 1
LR
Sbjct: 266 TLR 268


>tr|Q0DHR5|Q0DHR5_ORYSJ Os05g0447500 protein OS=Oryza sativa subsp.
japonica GN=Os05g0447500 PE=4 SV=1
Length = 2036

Score = 52.8 bits (125), Expect = 1e-05
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 5/120 (4%)
Frame = -2

Query: 354 RQISWFQLISADGDNAPPEKWS-----EGRVTNRVLVAHTLLQNEGYFSAWTCSDFSGTN 190
+ +SWFQ + + D + + S + + N VL AH LQ+EG+ S WT
Sbjct: 212 QNVSWFQFLPVEPDPSTASERSSKAEQKDALNNIVLSAHLHLQSEGFLSTWT-------- 263

Query: 189 EGSLIKLWLFLPGRVETINPASQSLLVGLKVLASGLWIISKDCNEVSNALCQALLNRMER 10
S + W P + E NP V+++GLW+ + EV+ ALCQAL N +ER
Sbjct: 264 -NSFVGPWD--PSQGEH-NP----------VVSNGLWVAPGNLEEVAAALCQALRNSLER 309


>tr|Q9XUM2|Q9XUM2_CAEEL Protein W04A8.3, partially confirmed by
transcript evidence OS=Caenorhabditis elegans GN=W04A8.3
PE=4 SV=2
Length = 312

Score = 33.9 bits (76), Expect = 4.6
Identities = 15/67 (22%), Positives = 36/67 (53%)
Frame = -3

Query: 287 RAASPIECWLHTHCFRMKAILVLGHVVTFQGQMKDLLSNCGSSFLGVLKLSIRHHNLCL* 108
+A ++C +H H F ++A+ + H + +++ LL+ + L + +L +H ++
Sbjct: 91 QALGTVKCSMHIHTFELEALFINSHRKDIEVELRQLLNFLKTEALHLPRLKFKHEHISSK 150

Query: 107 DLKSLLQ 87
LK +L+
Sbjct: 151 LLKRILK 157


>tr|B1HYL3|B1HYL3_LYSSC Spore germination protein KC
OS=Lysinibacillus sphaericus (strain C3-41) GN=gerKC
PE=4 SV=1
Length = 434

Score = 33.1 bits (74), Expect = 8.0
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -2

Query: 183 SLIKLWLFLPGRVETI---NPASQSLLVGLKVLASGLWIISKDCNEVS 49
SLI + LF+P + E + NP +LL+ +L SG W K+ NE++
Sbjct: 29 SLIVIKLFIPSKCEVVKIKNPKIITLLIAFSILTSGCW-SKKELNELA 75


>tr|Q4N9P5|Q4N9P5_THEPA Putative uncharacterized protein
OS=Theileria parva GN=TP01_0069 PE=4 SV=1
Length = 242

Score = 33.1 bits (74), Expect = 8.0
Identities = 18/48 (37%), Positives = 27/48 (56%)
Frame = +2

Query: 50 ETSLQSFEIIQSPEARTLSPTSKDCDAGLIVSTRPGRKSHSLIRDPSF 193
++SL + I Q P S TSK+ D+ LI +T R+S I+ P+F
Sbjct: 54 QSSLDNISISQRPLLSFSSETSKNVDSNLIYTTSGSRRSLRKIKKPNF 101