BP919742 |
Clone id |
YMU001_000128_F04 |
Library |
YMU01 |
Length |
571 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000128_F04. |
Accession |
BP919742 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACTGTGAGCACGATACAAACCCCATAAAAGCAGAAACCTGCCATTGAACTGTCTTAAAAA CTCTAAATCACATTCCCCAAGTTTTGCAGACTCACAATCCAGGTACTCCAAATCTTTCCG TATTGCTTTATGAAACTGAAAAATCGTATCAATCGGCTTGGGAGCTGCACAACAACTCGG CGATTCTAAATTGTTACCTAAACCAAACAGACCTGAACCAAAATAGCTTTTTGACAAGGA CTCCAAAAAGGAAGACTGAGGGGTCTCTTTCATGGCAAATCCGCCTTTGCGGCTACTTCT GCCCACTCCCAGTGCAGGTACGCAGCAAGACCCGGTTTGTCTGGAAACTTTTGACTGAGC AGCTACCACAAAATTACTTTGTTCGATCTGCACAGCACCAACATTTTCATTTCTTGCACG TTTTACAGAATCCTCATTTATTTTGGCATAATCAACCTCTCCATCCTGCTTGACATGATG TTCGGACTGGCAGCAAGTCCCTCCAAATGCCCCAGTTAATTGAGTTAAAAAACAATCCTC CATTGAATAAAAGCATTTAAAATCTTTTGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O30565 |
Definition |
sp|O30565|CDGT_BREBE Cyclomaltodextrin glucanotransferase OS=Brevibacillus brevis |
Align length |
48 |
Score (bit) |
30.4 |
E-value |
5.8 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SGS5 |
Definition |
tr|A9SGS5|A9SGS5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
168 |
Score (bit) |
111.0 |
E-value |
2.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919742|Adiantum capillus-veneris mRNA, clone: YMU001_000128_F04. (545 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SGS5|A9SGS5_PHYPA Predicted protein OS=Physcomitrella paten... 111 2e-23 tr|A7P3B2|A7P3B2_VITVI Chromosome chr1 scaffold_5, whole genome ... 103 8e-21 tr|A7PGW1|A7PGW1_VITVI Chromosome chr17 scaffold_16, whole genom... 94 6e-18 tr|A0ZT53|A0ZT53_LOTJA Putative E3 ubiquitin ligase OS=Lotus jap... 90 7e-17 tr|Q8LPQ5|Q8LPQ5_ARATH AT3g18290/MIE15_8 OS=Arabidopsis thaliana... 86 1e-15 tr|Q5N7K2|Q5N7K2_ORYSJ Zinc finger protein-like (Os01g0689300 pr... 85 2e-15 tr|B8A825|B8A825_ORYSI Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|A2ZWQ2|A2ZWQ2_ORYSJ Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|Q6L4G5|Q6L4G5_ORYSJ Putative zinc finger protein OS=Oryza sat... 82 2e-14 tr|Q6AUD8|Q6AUD8_ORYSJ Os05g0551000 protein OS=Oryza sativa subs... 82 2e-14 tr|B8AWE7|B8AWE7_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A3B6J8|A3B6J8_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|Q9LJQ1|Q9LJQ1_ARATH Gb|AAD55299.1 OS=Arabidopsis thaliana PE=... 81 4e-14 tr|A7QI26|A7QI26_VITVI Chromosome chr17 scaffold_101, whole geno... 54 4e-06 tr|Q9LMD9|Q9LMD9_ARATH F14D16.3 OS=Arabidopsis thaliana PE=4 SV=1 54 7e-06 tr|Q9SSG1|Q9SSG1_ARATH F25A4.26 protein OS=Arabidopsis thaliana ... 53 9e-06 tr|Q0WVS5|Q0WVS5_ARATH Putative uncharacterized protein At1g7477... 53 9e-06 tr|Q1IFN8|Q1IFN8_PSEE4 Putative uncharacterized protein OS=Pseud... 36 1.5 tr|A2E5Y4|A2E5Y4_TRIVA Putative uncharacterized protein OS=Trich... 35 2.6 tr|Q6J2H1|Q6J2H1_PSEYM VirB10 OS=Pseudomonas syringae pv. maculi... 35 3.4 tr|Q3I6J2|Q3I6J2_SILLA Putative uncharacterized protein OS=Silen... 30 4.3 tr|A8BB03|A8BB03_GIALA Putative uncharacterized protein OS=Giard... 34 4.4 tr|Q4WUM4|Q4WUM4_ASPFU Oligosaccharyl transferase subunit (Beta)... 33 9.9 tr|B0Y449|B0Y449_ASPFC Oligosaccharyl transferase subunit (Beta)... 33 9.9 tr|A1DET6|A1DET6_NEOFI Oligosaccharyl transferase subunit (Beta)... 33 9.9
>tr|A9SGS5|A9SGS5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_129609 PE=4 SV=1 Length = 1167
Score = 111 bits (278), Expect = 2e-23 Identities = 70/168 (41%), Positives = 86/168 (51%), Gaps = 3/168 (1%) Frame = -3
Query: 495 CCQSEHHVKQDGEVDYAKINED--SVKRARNENVGAVQIEQSNFVVAAQSKVSRQTGSCC 322 C H G + ++D SVKR + N G+ + N + + CC Sbjct: 481 CKGHPKHFSSTGSIRCLSTSQDECSVKRMKF-NAGSRPVNMQNGKNSCEG-----AARCC 534
Query: 321 VPALGVGR-SSRKGGFAMKETPQSSFLEXXXXXXXXXXXXXXXXXLESPSCCAAPKPIDT 145 P LG G ++R G A+K P ++ L P+C PKPID Sbjct: 535 APGLGCGSLTTRPSGLAIK--PYTASLNSSSSNSELFGWVND----SGPTCDPGPKPIDH 588
Query: 144 IFQFHKAIRKDLEYLDCESAKLGECDLEFLRQFNGRFLLLWGLYRAHS 1 IFQFHKAIRKDLEYLD ESAKL +CD +FLRQF GRF LWGLYRAHS Sbjct: 589 IFQFHKAIRKDLEYLDSESAKLADCDEDFLRQFQGRFQFLWGLYRAHS 636
>tr|A7P3B2|A7P3B2_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030372001 PE=4 SV=1 Length = 1237
Score = 103 bits (256), Expect = 8e-21 Identities = 65/168 (38%), Positives = 82/168 (48%), Gaps = 4/168 (2%) Frame = -3
Query: 492 CQSEHHVKQDGEVDYAKINEDSVKRARNENVGAVQIEQSNFVVAAQS----KVSRQTGSC 325 C K++ D+ +E VKR E SN ++ K++ SC Sbjct: 534 CTPLFSAKENSTSDHLDDDERPVKRGN-----CTSWEDSNACDPRRTVNIQKLACSNQSC 588
Query: 324 CVPALGVGRSSRKGGFAMKETPQSSFLEXXXXXXXXXXXXXXXXXLESPSCCAAPKPIDT 145 CVP LGV S+ G S + SP +A +PID Sbjct: 589 CVPELGVNNSNLGTGSLASAKSLRSLSFIPCAPSLNSSLFNWETDVSSPDIGSATRPIDN 648
Query: 144 IFQFHKAIRKDLEYLDCESAKLGECDLEFLRQFNGRFLLLWGLYRAHS 1 IF+FHKAIRKDLEYLD ES +L +C+ FLRQF+GRF LLWGLYRAHS Sbjct: 649 IFKFHKAIRKDLEYLDVESGRLNDCNDTFLRQFSGRFRLLWGLYRAHS 696
>tr|A7PGW1|A7PGW1_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017711001 PE=4 SV=1 Length = 1234
Score = 93.6 bits (231), Expect = 6e-18 Identities = 63/150 (42%), Positives = 79/150 (52%), Gaps = 4/150 (2%) Frame = -3
Query: 438 NEDSVKRARNENVGAVQIEQSNFVVAAQSKVSRQTGSCCVPALGVGRSSRKGGFAMKETP 259 N VKR + Q S+ +++A ++S SCCVP LGV ++ G T Sbjct: 552 NRRPVKRNSSVPCKNDQATDSSEMISAD-ELSSSNWSCCVPDLGVNGNNL--GLGCLSTV 608
Query: 258 QSSFLEXXXXXXXXXXXXXXXXXLESPSCCA----APKPIDTIFQFHKAIRKDLEYLDCE 91 + FL E+ S + +PIDTIF+FHKAI KDLEYLD E Sbjct: 609 K--FLRPLSFSSSAPSLNSSLFIWETDSSSSHIGCTERPIDTIFKFHKAISKDLEYLDVE 666
Query: 90 SAKLGECDLEFLRQFNGRFLLLWGLYRAHS 1 S KL +CD FL+QF GRF LLWGLYRAHS Sbjct: 667 SGKLIDCDETFLQQFIGRFRLLWGLYRAHS 696
>tr|A0ZT53|A0ZT53_LOTJA Putative E3 ubiquitin ligase OS=Lotus japonicus GN=LjnsRING PE=2 SV=1 Length = 1236
Score = 90.1 bits (222), Expect = 7e-17 Identities = 54/112 (48%), Positives = 62/112 (55%), Gaps = 2/112 (1%) Frame = -3
Query: 330 SCCVPALGVGRSSRKGGFAMKETPQSSFLEXXXXXXXXXXXXXXXXXLESPS--CCAAPK 157 SCCVP LGV S+ G + T +S ES S + + Sbjct: 588 SCCVPGLGV--STNNLGLSSVSTAKSLRSLSFSSSPPSLNSSLFIWETESSSGDVGSTQR 645
Query: 156 PIDTIFQFHKAIRKDLEYLDCESAKLGECDLEFLRQFNGRFLLLWGLYRAHS 1 PIDT+F+FHKAIRKDLEYLD ES KL D LR F+GRF LLWGLYRAHS Sbjct: 646 PIDTVFKFHKAIRKDLEYLDVESGKLSHGDETILRHFSGRFRLLWGLYRAHS 697
>tr|Q8LPQ5|Q8LPQ5_ARATH AT3g18290/MIE15_8 OS=Arabidopsis thaliana GN=At3g18290 PE=2 SV=1 Length = 1254
Score = 86.3 bits (212), Expect = 1e-15 Identities = 54/123 (43%), Positives = 65/123 (52%), Gaps = 1/123 (0%) Frame = -3
Query: 366 VAAQSKVSRQTGSCCVPALGVGRSSRK-GGFAMKETPQSSFLEXXXXXXXXXXXXXXXXX 190 VA K S SCCVP LGV + + G + +SS L Sbjct: 592 VANGCKPSGNGRSCCVPDLGVNNNCLELGSLPAAKAMRSSSLNSAAPALNSSLFIWEMDS 651
Query: 189 LESPSCCAAPKPIDTIFQFHKAIRKDLEYLDCESAKLGECDLEFLRQFNGRFLLLWGLYR 10 S A +P+ TIF+FHKAI KDLE+LD ES KL +CD F+RQF GRF LLWG Y+ Sbjct: 652 -NSFGTGHAERPVATIFKFHKAISKDLEFLDVESGKLIDCDGTFIRQFIGRFHLLWGFYK 710
Query: 9 AHS 1 AHS Sbjct: 711 AHS 713
>tr|Q5N7K2|Q5N7K2_ORYSJ Zinc finger protein-like (Os01g0689300 protein) OS=Oryza sativa subsp. japonica GN=P0519D04.45 PE=4 SV=1 Length = 1242
Score = 85.1 bits (209), Expect = 2e-15 Identities = 50/110 (45%), Positives = 57/110 (51%), Gaps = 1/110 (0%) Frame = -3
Query: 327 CCVPALGVGRSSRKGGFAMKETPQSSFLEXXXXXXXXXXXXXXXXXLESPSCC-AAPKPI 151 CC+P L V + ++ L S SC +PI Sbjct: 588 CCIPGLRVETGNLAISSSLASAKSFRSLSYNSSAPSLYSSLFSWETDASLSCSDGISRPI 647
Query: 150 DTIFQFHKAIRKDLEYLDCESAKLGECDLEFLRQFNGRFLLLWGLYRAHS 1 DTIF+FHKAIRKDLEYLD ES KL + D LRQF GRF LLWGLYRAHS Sbjct: 648 DTIFKFHKAIRKDLEYLDVESGKLIDGDESCLRQFIGRFRLLWGLYRAHS 697
>tr|B8A825|B8A825_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_03330 PE=4 SV=1 Length = 1236
Score = 85.1 bits (209), Expect = 2e-15 Identities = 50/110 (45%), Positives = 57/110 (51%), Gaps = 1/110 (0%) Frame = -3
Query: 327 CCVPALGVGRSSRKGGFAMKETPQSSFLEXXXXXXXXXXXXXXXXXLESPSCC-AAPKPI 151 CC+P L V + ++ L S SC +PI Sbjct: 588 CCIPGLRVETGNLAISSSLASAKSFRSLSYNSSAPSLYSSLFSWETDASLSCSDGISRPI 647
Query: 150 DTIFQFHKAIRKDLEYLDCESAKLGECDLEFLRQFNGRFLLLWGLYRAHS 1 DTIF+FHKAIRKDLEYLD ES KL + D LRQF GRF LLWGLYRAHS Sbjct: 648 DTIFKFHKAIRKDLEYLDVESGKLIDGDESCLRQFIGRFRLLWGLYRAHS 697
>tr|A2ZWQ2|A2ZWQ2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_002974 PE=4 SV=1 Length = 1167
Score = 85.1 bits (209), Expect = 2e-15 Identities = 50/110 (45%), Positives = 57/110 (51%), Gaps = 1/110 (0%) Frame = -3
Query: 327 CCVPALGVGRSSRKGGFAMKETPQSSFLEXXXXXXXXXXXXXXXXXLESPSCC-AAPKPI 151 CC+P L V + ++ L S SC +PI Sbjct: 600 CCIPGLRVETGNLAISSSLASAKSFRSLSYNSSAPSLYSSLFSWETDASLSCSDGISRPI 659
Query: 150 DTIFQFHKAIRKDLEYLDCESAKLGECDLEFLRQFNGRFLLLWGLYRAHS 1 DTIF+FHKAIRKDLEYLD ES KL + D LRQF GRF LLWGLYRAHS Sbjct: 660 DTIFKFHKAIRKDLEYLDVESGKLIDGDESCLRQFIGRFRLLWGLYRAHS 709
>tr|Q6L4G5|Q6L4G5_ORYSJ Putative zinc finger protein OS=Oryza sativa subsp. japonica GN=P0560C03.11 PE=4 SV=1 Length = 995
Score = 82.0 bits (201), Expect = 2e-14 Identities = 40/53 (75%), Positives = 44/53 (83%) Frame = -3
Query: 159 KPIDTIFQFHKAIRKDLEYLDCESAKLGECDLEFLRQFNGRFLLLWGLYRAHS 1 +PIDTIF+FHKAIRKDLE+LD ES KL + D LRQF GRF LLWGLYRAHS Sbjct: 509 RPIDTIFKFHKAIRKDLEFLDVESRKLIDGDESSLRQFIGRFRLLWGLYRAHS 561
>tr|Q6AUD8|Q6AUD8_ORYSJ Os05g0551000 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0079H23.4 PE=2 SV=1 Length = 811
Score = 82.0 bits (201), Expect = 2e-14 Identities = 40/53 (75%), Positives = 44/53 (83%) Frame = -3
Query: 159 KPIDTIFQFHKAIRKDLEYLDCESAKLGECDLEFLRQFNGRFLLLWGLYRAHS 1 +PIDTIF+FHKAIRKDLE+LD ES KL + D LRQF GRF LLWGLYRAHS Sbjct: 221 RPIDTIFKFHKAIRKDLEFLDVESRKLIDGDESSLRQFIGRFRLLWGLYRAHS 273
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