BP919747 |
Clone id |
YMU001_000128_F09 |
Library |
YMU01 |
Length |
484 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000128_F09. |
Accession |
BP919747 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL309Contig1 |
Sequence |
TTTTTTTTTTTTTTTTCCATCACAAATTTCCACTCGTATTTCATAACATCTCCCGTTGCA AAGGCAAATAGCAAAGTTTGTCCTGCATAGATGACATAAAGCTAACTTTGTGTAGCTTTG CCAGCTTGCGCTTGAAAATTGCATGGAATCCGCCTAAGCTTTCCCCTTGCGCAATTTTGC CAGCTCTCGCTTGACAATAGAGCTCCTCTTGATCCTTGCCACCATGACTTTAAATCGGTC AAAATCATTCAATGAAGCACGCTTCTTTTGCACAATTAGTTTCCTCCCCCAAGAGCTGTT AGCCCATTTGCCATGCACATCTGCAGAATTAATAGCATCTGTAAGTTGTTTTTTCTTTGG CATCCTTGGTATATCAATCTTGATGTCAGTTAAAGACAACCGGTTGAAATTCATGGCACC ACGAACCATATCAGGTGCATCTACTAATGCCCGGTTCTGATCCACAAAGTCCACAATGAC GACG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9T043 |
Definition |
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana |
Align length |
106 |
Score (bit) |
154.0 |
E-value |
2.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919747|Adiantum capillus-veneris mRNA, clone: YMU001_000128_F09. (454 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis... 154 2e-37 sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum s... 152 9e-37 sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis... 151 1e-36 sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RP... 94 3e-19 sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=... 94 4e-19 sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens G... 93 6e-19 sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia ja... 93 6e-19 sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicu... 91 2e-18 sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus G... 91 2e-18 sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rube... 86 8e-17 sp|P38754|RL14B_YEAST 60S ribosomal protein L14-B OS=Saccharomyc... 75 2e-13 sp|O94238|RL14_SCHPO 60S ribosomal protein L14 OS=Schizosaccharo... 74 2e-13 sp|P36105|RL14A_YEAST 60S ribosomal protein L14-A OS=Saccharomyc... 74 2e-13 sp|P55841|RL14_DROME 60S ribosomal protein L14 OS=Drosophila mel... 67 4e-11 sp|Q95ZE8|RL14_DROVI 60S ribosomal protein L14 OS=Drosophila vir... 64 2e-10 sp|Q54Z09|RL14_DICDI 60S ribosomal protein L14 OS=Dictyostelium ... 62 9e-10 sp|Q25278|RL14_LEIDO Probable 60S ribosomal protein L14 OS=Leish... 49 8e-06 sp|P55843|RL14_TRYCO Probable 60S ribosomal protein L14 OS=Trypa... 47 5e-05 sp|A1RTL6|RL14E_PYRIL 50S ribosomal protein L14e OS=Pyrobaculum ... 37 0.031 sp|Q8ZYB4|RL14E_PYRAE 50S ribosomal protein L14e OS=Pyrobaculum ... 37 0.031 sp|Q6BNG2|DPOE_DEBHA DNA polymerase epsilon catalytic subunit A ... 37 0.040 sp|A4WH36|RL14E_PYRAR 50S ribosomal protein L14e OS=Pyrobaculum ... 36 0.090 sp|A3MS76|RL14E_PYRCJ 50S ribosomal protein L14e OS=Pyrobaculum ... 34 0.34 sp|Q9YDD7|RL14E_AERPE 50S ribosomal protein L14e OS=Aeropyrum pe... 33 0.44 sp|Q8TX43|RL14E_METKA 50S ribosomal protein L14e OS=Methanopyrus... 32 0.99 sp|Q8U2L5|RL14E_PYRFU 50S ribosomal protein L14e OS=Pyrococcus f... 32 1.3 sp|P59937|RL14E_PYRHO 50S ribosomal protein L14e OS=Pyrococcus h... 32 1.7 sp|Q9UZJ5|RL14E_PYRAB 50S ribosomal protein L14e OS=Pyrococcus a... 32 1.7 sp|P54054|RL14E_METJA 50S ribosomal protein L14e OS=Methanocaldo... 32 1.7 sp|Q5R922|COPB_PONAB Coatomer subunit beta OS=Pongo abelii GN=CO... 31 2.2
>sp|Q9T043|RL142_ARATH 60S ribosomal protein L14-2 OS=Arabidopsis thaliana GN=RPL14B PE=2 SV=1 Length = 134
Score = 154 bits (388), Expect = 2e-37 Identities = 76/106 (71%), Positives = 90/106 (84%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAPDMVRGAMNFNRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKW 274 VVIVD VDQNRALVDAPDM R MNF RLSLTDI IDI R+PKKK L +A+ ADV KW Sbjct: 25 VVIVDVVDQNRALVDAPDMERIQMNFKRLSLTDIVIDINRVPKKKALIEAMEKADVKNKW 84
Query: 273 ANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 136 SSWGRKLIVQK+RA+LNDFDRFK+M+A+IK++ +V++ELAKL+K Sbjct: 85 EKSSWGRKLIVQKRRANLNDFDRFKIMLAKIKKAGVVRQELAKLKK 130
>sp|P55844|RL14_PEA Probable 60S ribosomal protein L14 OS=Pisum sativum PE=2 SV=1 Length = 133
Score = 152 bits (383), Expect = 9e-37 Identities = 75/109 (68%), Positives = 91/109 (83%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAPDMVRGAMNFNRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKW 274 VVIVD +DQ RALVDAPDM R +NF RLSLTD+KIDI R+PKKK L A+ +ADV KW Sbjct: 25 VVIVDVIDQTRALVDAPDMERSPINFKRLSLTDLKIDIKRVPKKKDLIKALEAADVKNKW 84
Query: 273 ANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRKGKA 127 A SSWGRKLIV+K RA+LNDFDRFK+M+A+IKR++ V++ELAKL+K A Sbjct: 85 AKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAGVRQELAKLKKTAA 133
>sp|Q9SIM4|RL141_ARATH 60S ribosomal protein L14-1 OS=Arabidopsis thaliana GN=RPL14A PE=2 SV=1 Length = 134
Score = 151 bits (382), Expect = 1e-36 Identities = 76/106 (71%), Positives = 89/106 (83%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAPDMVRGAMNFNRLSLTDIKIDIPRMPKKKQLTDAINSADVHGKW 274 VVIVD VDQNRALVDAPDM R MN RLSLTDI IDI R+PKKK L +A+ ADV KW Sbjct: 25 VVIVDVVDQNRALVDAPDMERIQMNLKRLSLTDIVIDINRVPKKKVLIEAMEKADVKNKW 84
Query: 273 ANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 136 SSWGRKLIVQK+RA+LNDFDRFK+M+A+IKR+ IV++ELAKL++ Sbjct: 85 EKSSWGRKLIVQKRRAALNDFDRFKIMLAKIKRAGIVRQELAKLKR 130
>sp|A1XQU3|RL14_PIG 60S ribosomal protein L14 OS=Sus scrofa GN=RPL14 PE=2 SV=1 Length = 213
Score = 94.0 bits (232), Expect = 3e-19 Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 2/108 (1%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAP--DMVRGAMNFNRLSLTDIKIDIPRMPKKKQLTDAINSADVHG 280 V IVD +DQNRALVD P + R AM F + LTD + P ++K + A AD++ Sbjct: 25 VAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINA 84
Query: 279 KWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 136 KWA + W +K+ ++K+A + DFDR+KVM AR R+ ++K E+ KL+K Sbjct: 85 KWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRLIKLEVKKLQK 132
>sp|Q3T0U2|RL14_BOVIN 60S ribosomal protein L14 OS=Bos taurus GN=RPL14 PE=2 SV=3 Length = 214
Score = 93.6 bits (231), Expect = 4e-19 Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 2/108 (1%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAP--DMVRGAMNFNRLSLTDIKIDIPRMPKKKQLTDAINSADVHG 280 V IVD +DQNRALVD P + R AM F + LTD + P ++K + A AD++ Sbjct: 25 VAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINA 84
Query: 279 KWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 136 KWA + W +K+ ++K+A + DFDR+KVM AR R+ ++K E+ KL+K Sbjct: 85 KWAATRWAKKIEAREKKAKMTDFDRYKVMKARKMRNRLIKIEVKKLQK 132
>sp|P50914|RL14_HUMAN 60S ribosomal protein L14 OS=Homo sapiens GN=RPL14 PE=1 SV=4 Length = 215
Score = 92.8 bits (229), Expect = 6e-19 Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 2/108 (1%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAP--DMVRGAMNFNRLSLTDIKIDIPRMPKKKQLTDAINSADVHG 280 V IVD +DQNRALVD P + R AM F + LTD + P +K + A AD++ Sbjct: 25 VAIVDVIDQNRALVDGPCTQVRRQAMPFKCMQLTDFILKFPHSAHQKYVRQAWQKADINT 84
Query: 279 KWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 136 KWA + W +K+ ++++A + DFDRFKVM A+ R+ I+K E+ KL+K Sbjct: 85 KWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQK 132
>sp|Q7XYA7|RL14_GRIJA 60S ribosomal protein L14 OS=Griffithsia japonica GN=RPL14 PE=2 SV=1 Length = 133
Score = 92.8 bits (229), Expect = 6e-19 Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 3/108 (2%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAPD--MVRGAMNFNRLSLTDIKID-IPRMPKKKQLTDAINSADVH 283 VVIVD +DQNR LVD+P + R +N R++LT IK+D I R ++ +A V Sbjct: 25 VVIVDILDQNRILVDSPSHGLKRKVINVKRIALTSIKVDDIARGAPVAEVKSKYTAAKVD 84
Query: 282 GKWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLR 139 +A S WG+KL ++KRA+L+DF RFKVMVAR+K+S + ELAKL+ Sbjct: 85 ETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKKSKAINAELAKLK 132
>sp|Q63507|RL14_RAT 60S ribosomal protein L14 OS=Rattus norvegicus GN=Rpl14 PE=1 SV=3 Length = 214
Score = 91.3 bits (225), Expect = 2e-18 Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 2/108 (1%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAP--DMVRGAMNFNRLSLTDIKIDIPRMPKKKQLTDAINSADVHG 280 V IVD +DQNRALVD P + R AM F + LTD + P ++K + A AD++ Sbjct: 25 VAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINT 84
Query: 279 KWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 136 KWA + W +K+ ++++A + DFDRFKVM A+ R+ I+K E+ KL++ Sbjct: 85 KWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 132
>sp|Q9CR57|RL14_MOUSE 60S ribosomal protein L14 OS=Mus musculus GN=Rpl14 PE=2 SV=3 Length = 217
Score = 91.3 bits (225), Expect = 2e-18 Identities = 46/108 (42%), Positives = 69/108 (63%), Gaps = 2/108 (1%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAP--DMVRGAMNFNRLSLTDIKIDIPRMPKKKQLTDAINSADVHG 280 V IVD +DQNRALVD P + R AM F + LTD + P ++K + A AD++ Sbjct: 25 VAIVDVIDQNRALVDGPCTRVRRQAMPFKCMQLTDFILKFPHSARQKYVRKAWEKADINT 84
Query: 279 KWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 136 KWA + W +K+ ++++A + DFDRFKVM A+ R+ I+K E+ KL++ Sbjct: 85 KWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 132
>sp|O46160|RL14_LUMRU 60S ribosomal protein L14 OS=Lumbricus rubellus GN=RPL14 PE=3 SV=1 Length = 152
Score = 85.9 bits (211), Expect = 8e-17 Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%) Frame = -2
Query: 453 VVIVDFVDQNRALVDAP--DMVRGAMNFNRLSLTDIKIDIPRMPKKKQLTDAINSADVHG 280 V IVD +DQNRALVD P + R +MNF L LT++K P K + A ++ Sbjct: 25 VAIVDVIDQNRALVDGPCTHVARKSMNFKELELTNLKAKFPHSAKTGVVKKAWEKDEISK 84
Query: 279 KWANSSWGRKLIVQKKRASLNDFDRFKVMVARIKRSSIVKRELAKLRK 136 KW S +K+ ++KR +L DF+RFK+M A+ R+ ++K E KLRK Sbjct: 85 KWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLIKIEFGKLRK 132
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NXE0 |
Definition |
tr|A7NXE0|A7NXE0_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
109 |
Score (bit) |
164.0 |
E-value |
3.0e-39 |
Report |
|