BP919751 |
Clone id |
YMU001_000128_G01 |
Library |
YMU01 |
Length |
537 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000128_G01. |
Accession |
BP919751 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GCATCCTTTANTTTGTCTATCTCCTCCTCAATTTTTCTGACGAAAGTCTCATTGTATGTA TAAGGGCGTCGTCTGCATGGTCTGACATCACGTCTAGGTGGTATCGTGTGCTGACGGATC TTTGGATCTATTCCCTTCAGGTCTTTGTACGACCAAGCAAACACATCTTTATACCGTCTG AATGTATCTTTCAGAAGCCGCTCTTCTTCTTCCGTGAGGTCCATGGCAATGTATGCCGGT TTAGGTTCCTCGCCTAGTTCTGCTAAGTTTATGCATTTGGCTTTTTCAGGCCCATCATAT GAAGTTCCAGGTTCTTTTGGGTCTCATTTGGGCTCCTACACTACAATTTTTCTATCCAGA ATGGTATACTTTTTGTAGTGGGAAGGTGCATTGAACTTATCATCGTTTGATTCATCATCA ATTTCCAACTCTGTCGTCCAAACTTCTTTCAAAGTTCGTTTCAACTCATTGTATTTGTGT TTGTGCTCAGTTTTGGATAACTTCGTTGCTTTTTCTGAAATACTTTCTGTATGTGGC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54873 |
Definition |
sp|Q54873|HYSA_STRPN Hyaluronate lyase OS=Streptococcus pneumoniae |
Align length |
114 |
Score (bit) |
34.7 |
E-value |
0.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2AA19 |
Definition |
tr|Q2AA19|Q2AA19_ASPOF RNase H family protein OS=Asparagus officinalis |
Align length |
140 |
Score (bit) |
62.4 |
E-value |
1.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919751|Adiantum capillus-veneris mRNA, clone: YMU001_000128_G01. (537 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q2AA19|Q2AA19_ASPOF RNase H family protein OS=Asparagus offic... 62 1e-08 tr|Q2AA48|Q2AA48_ASPOF Reverse transcriptase family protein OS=A... 62 2e-08 tr|A5CBR4|A5CBR4_VITVI Putative uncharacterized protein OS=Vitis... 60 9e-08 tr|A5ATL5|A5ATL5_VITVI Putative uncharacterized protein OS=Vitis... 57 8e-07 tr|A5AZ12|A5AZ12_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06 tr|A5AH94|A5AH94_VITVI Putative uncharacterized protein OS=Vitis... 55 2e-06 tr|A5BPS7|A5BPS7_VITVI Putative uncharacterized protein OS=Vitis... 54 7e-06 tr|A5C5F1|A5C5F1_VITVI Putative uncharacterized protein OS=Vitis... 53 9e-06 tr|A5C1W7|A5C1W7_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05 tr|A5BSJ3|A5BSJ3_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05 tr|A5BRI4|A5BRI4_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05 tr|A5AJ74|A5AJ74_VITVI Putative uncharacterized protein OS=Vitis... 53 1e-05 tr|A5BP54|A5BP54_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05 tr|A5BDN9|A5BDN9_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05 tr|A5AZJ9|A5AZJ9_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05 tr|A5AZE5|A5AZE5_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05 tr|Q93Y69|Q93Y69_ORYSJ Putative gag-pol OS=Oryza sativa subsp. j... 52 2e-05 tr|Q10I89|Q10I89_ORYSJ Retrotransposon protein, putative, unclas... 52 2e-05 tr|A5C6U7|A5C6U7_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5BYJ0|A5BYJ0_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5BSV0|A5BSV0_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5BRI1|A5BRI1_VITVI Putative uncharacterized protein (Fragmen... 52 2e-05 tr|A5BNA6|A5BNA6_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5BHA9|A5BHA9_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5BFP7|A5BFP7_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5BDL7|A5BDL7_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5B6Y5|A5B6Y5_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5B3S7|A5B3S7_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5B120|A5B120_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05 tr|A5AZ81|A5AZ81_VITVI Putative uncharacterized protein OS=Vitis... 52 2e-05
>tr|Q2AA19|Q2AA19_ASPOF RNase H family protein OS=Asparagus officinalis GN=20.t00014 PE=4 SV=1 Length = 1189
Score = 62.4 bits (150), Expect = 1e-08 Identities = 38/140 (27%), Positives = 68/140 (48%) Frame = -2
Query: 422 IDDESNDDKFNAPSHYKKYTILDRKIVV*EPK*DPKEPGTSYDGPEKAKCINLAELGEEP 243 +D+++ DD+ S + + R ++ + + + +EP T +K +N+ + +P Sbjct: 71 LDEDAGDDEELMESTNDPW--IKRLNILWDMRFEQREPPTE----DKVIQVNMGD-EHDP 123
Query: 242 KPAYIAMDLTEEEERLLKDTFRRYKDVFAWSYKDLKGIDPKIRQHTIXXXXXXXXXXXXP 63 KP +IA DL+ E+ L R Y DVFAW+Y+D+ G+DPK+ H + Sbjct: 124 KPIFIAEDLSSSEKEDLISLIREYIDVFAWNYEDMPGLDPKVAMHHLNIDPDAKPVKQQQ 183
Query: 62 YTYNETFVRKIEEEIDKXKD 3 + + IE E+ K D Sbjct: 184 RRFRPEIMESIESEVKKLID 203
>tr|Q2AA48|Q2AA48_ASPOF Reverse transcriptase family protein OS=Asparagus officinalis GN=19.t00011 PE=4 SV=1 Length = 1181
Score = 61.6 bits (148), Expect = 2e-08 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 2/98 (2%) Frame = -2
Query: 290 PEKAKCINLAELGEE--PKPAYIAMDLTEEEERLLKDTFRRYKDVFAWSYKDLKGIDPKI 117 P + K I + +G+E PKP +IA DL+ E+ L R Y DVFAW+Y+D+ G+DPK+ Sbjct: 611 PTEDKVIQI-NMGDESNPKPIFIAEDLSSSEKENLISLIREYIDVFAWNYEDMPGLDPKV 669
Query: 116 RQHTIXXXXXXXXXXXXPYTYNETFVRKIEEEIDKXKD 3 H + + + IE E+ K D Sbjct: 670 AMHRLNIDPDVKPVKQQQRRFRPEIMESIESEVKKLID 707
>tr|A5CBR4|A5CBR4_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024677 PE=4 SV=1 Length = 695
Score = 59.7 bits (143), Expect = 9e-08 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 4/108 (3%) Frame = -2
Query: 323 DPKEPGTSYDGPEKAKCINLAELG----EEPKPAYIAMDLTEEEERLLKDTFRRYKDVFA 156 +P+E ++ +A L EL E+P+P Y++M L+ EE+ + YKDVFA Sbjct: 330 EPEEAPHVFEDGGQATVDELKELNLGTNEKPRPIYVSMLLSPFEEKSYFELLLDYKDVFA 389
Query: 155 WSYKDLKGIDPKIRQHTIXXXXXXXXXXXXPYTYNETFVRKIEEEIDK 12 WSYK + G+DPK+ H + + V +IE +I+K Sbjct: 390 WSYKKMSGLDPKVAIHQLMVKHGVRPIKQAQRRFRLELVMQIETKIEK 437
>tr|A5ATL5|A5ATL5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019751 PE=4 SV=1 Length = 633
Score = 56.6 bits (135), Expect = 8e-07 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 4/112 (3%) Frame = -2
Query: 425 EIDDESNDDKFNAPSHYKKYTILDRKIVV*EPK*DPKEPGTSYDGPEKAKCINLAELG-- 252 ++D+E + D + H + ++ + +P + +++ E+A L EL Sbjct: 227 QLDEECHKDVEESLRHTSYHVTVEVNSNPESSEDEPAKAPQAFEDEEQATVDELKELNLG 286
Query: 251 --EEPKPAYIAMDLTEEEERLLKDTFRRYKDVFAWSYKDLKGIDPKIRQHTI 102 E+ +P Y+++ L+ EE+ YKDVFAWSYK++ +DPK+ H + Sbjct: 287 TNEDLRPIYVSVLLSHSEEKSYLKLLLDYKDVFAWSYKEMSSLDPKVAMHQL 338
>tr|A5AZ12|A5AZ12_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041625 PE=4 SV=1 Length = 619
Score = 55.5 bits (132), Expect = 2e-06 Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 2/56 (3%) Frame = -2
Query: 263 AELG--EEPKPAYIAMDLTEEEERLLKDTFRRYKDVFAWSYKDLKGIDPKIRQHTI 102 A LG E P+P Y+ M L+ EE+ + YKDVFAWSYK++ G+DPK+ H + Sbjct: 335 ANLGTNENPRPIYVTMLLSPFEEKSYFELLLDYKDVFAWSYKEMLGLDPKVAVHQL 390
>tr|A5AH94|A5AH94_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041027 PE=4 SV=1 Length = 888
Score = 55.5 bits (132), Expect = 2e-06 Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 4/78 (5%) Frame = -2
Query: 323 DPKEPGTSYDGPEKAKCINLAELG----EEPKPAYIAMDLTEEEERLLKDTFRRYKDVFA 156 +P E ++ +A L EL E P+P Y++M L+ EE++ YKDVF Sbjct: 61 EPLEAPQVFEDAWQASVDELKELNLRTNENPRPIYVSMLLSPFEEKIYFKLLLDYKDVFT 120
Query: 155 WSYKDLKGIDPKIRQHTI 102 WSYK++ G+DPK H + Sbjct: 121 WSYKEISGLDPKFTVHQL 138
>tr|A5BPS7|A5BPS7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003207 PE=4 SV=1 Length = 2072
Score = 53.5 bits (127), Expect = 7e-06 Identities = 26/80 (32%), Positives = 41/80 (51%) Frame = -2
Query: 251 EEPKPAYIAMDLTEEEERLLKDTFRRYKDVFAWSYKDLKGIDPKIRQHTIXXXXXXXXXX 72 ++P+ I +DL+ +E L R Y DVFAWSY+D+ G+DP I QH + Sbjct: 1158 DQPRELRIGLDLSSDERDSLIQLLRSYLDVFAWSYEDMPGLDPSIVQHRLPLLPHARPVK 1217
Query: 71 XXPYTYNETFVRKIEEEIDK 12 + + +++EEI K Sbjct: 1218 QKLRRLHPRWSLQVKEEIQK 1237
>tr|A5C5F1|A5C5F1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033315 PE=4 SV=1 Length = 2351
Score = 53.1 bits (126), Expect = 9e-06 Identities = 27/80 (33%), Positives = 40/80 (50%) Frame = -2
Query: 251 EEPKPAYIAMDLTEEEERLLKDTFRRYKDVFAWSYKDLKGIDPKIRQHTIXXXXXXXXXX 72 ++PK I DL+ +E L R Y DVFAWSY+D+ G+DP I QH + Sbjct: 964 DQPKELRIGSDLSTDERDSLIQLLRAYLDVFAWSYEDMPGLDPSIVQHRLPLLPHARPVK 1023
Query: 71 XXPYTYNETFVRKIEEEIDK 12 + + +++EEI K Sbjct: 1024 QKLRRLHPRWSLQVKEEIQK 1043
>tr|A5C1W7|A5C1W7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_002875 PE=4 SV=1 Length = 1391
Score = 52.8 bits (125), Expect = 1e-05 Identities = 26/80 (32%), Positives = 40/80 (50%) Frame = -2
Query: 251 EEPKPAYIAMDLTEEEERLLKDTFRRYKDVFAWSYKDLKGIDPKIRQHTIXXXXXXXXXX 72 ++P+ I DL+ +E L R Y DVFAWSY+D+ G+DP I QH + Sbjct: 529 DQPRELMIGSDLSTDERDSLIQLLRSYLDVFAWSYEDMPGLDPSIVQHRLPLLPQARPVK 588
Query: 71 XXPYTYNETFVRKIEEEIDK 12 + + +++EEI K Sbjct: 589 QKLRRLHHRWSLQVKEEIQK 608
>tr|A5BSJ3|A5BSJ3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008285 PE=4 SV=1 Length = 2237
Score = 52.8 bits (125), Expect = 1e-05 Identities = 26/80 (32%), Positives = 40/80 (50%) Frame = -2
Query: 251 EEPKPAYIAMDLTEEEERLLKDTFRRYKDVFAWSYKDLKGIDPKIRQHTIXXXXXXXXXX 72 ++P+ I DL+ +E L R Y DVFAWSY+D+ G+DP I QH + Sbjct: 1181 DQPRELRIGSDLSTDERDSLIQLLRSYSDVFAWSYEDMPGLDPSIVQHRLPLLPHARPVK 1240
Query: 71 XXPYTYNETFVRKIEEEIDK 12 + + +++EEI K Sbjct: 1241 QKLRRLHPRWSLQVKEEIQK 1260
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