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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919752
Clone id YMU001_000128_G02
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000128_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCTGCATGCACGAGCCATGGTTCTGCTTCATCTTCATCCAGCCCTTGAGCATGCCTTCAT
TGCCAATATAGCCACTCCAAAATTCCTTGGTGCTGCCCTGCTCTACTGTCGTATGGCAGC
CACAGCCCCTTGACACACCTTGAGGCTGCTGCATAATCCTTCAACACTTGCTGCTGCCGG
CGGCACTACTGCTCTCTTCCCCTTTACCATCTCTACGTTGCAGATCTACGTCACCGGATC
CACAACCACCTAGCCAAATAGACTAATGGCCACCACATGTACAACCTGCTGGTGCCCTAC
AGCCACTCCAACGCCCACAACCAGCTCTTCCCCCAACAAAAAGAGCCAGAATCCGCTCTT
ACAAGCCGCCCACGCTTTTGCTTCATCCTCATCCAGCCCTTGAGCATGCCTTCATTGCCA
ATATAGCCACTCCAAAATTCCTTGGTGCTGCCCTGCTCTACTGTCGTATGGC
■■Homology search results ■■ -
sp_hit_id Q6L8H4
Definition sp|Q6L8H4|KRA51_HUMAN Keratin-associated protein 5-1 OS=Homo sapiens
Align length 34
Score (bit) 33.9
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919752|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_G02.
         (472 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6L8H4|KRA51_HUMAN Keratin-associated protein 5-1 OS=Homo sap...    34   0.38 
sp|A1JPQ9|BTUC_YERE8 Vitamin B12 import system permease protein ...    33   0.82 
sp|Q7N3Q3|BTUC_PHOLL Vitamin B12 import system permease protein ...    31   2.4  
sp|Q8Y210|LNT_RALSO Apolipoprotein N-acyltransferase OS=Ralstoni...    31   3.1  
sp|Q6D656|BTUC_ERWCT Vitamin B12 import system permease protein ...    30   4.1  
sp|Q2TA51|KRA55_MOUSE Keratin associated protein 5-5 OS=Mus musc...    30   4.2  
sp|P23792|DISC_DROME Protein disconnected OS=Drosophila melanoga...    30   4.2  
sp|P20730|CHHB2_BOMMO Chorion class high-cysteine HCB protein 13...    30   4.2  
sp|Q62220|KRA54_MOUSE Keratin-associated protein 5-4 OS=Mus musc...    30   5.4  
sp|Q9D5Z7|KRA52_MOUSE Keratin-associated protein 5-2 OS=Mus musc...    30   5.4  
sp|P05687|CHHA2_BOMMO Chorion class high-cysteine HCA protein 12...    30   5.4  
sp|Q5JVG2|ZN484_HUMAN Zinc finger protein 484 OS=Homo sapiens GN...    30   7.1  
sp|Q9D226|KRA53_MOUSE Keratin-associated protein 5-3 OS=Mus musc...    30   7.1  
sp|Q55BT1|U512G_DICDI UPF0512 protein G OS=Dictyostelium discoid...    29   9.3  

>sp|Q6L8H4|KRA51_HUMAN Keratin-associated protein 5-1 OS=Homo
           sapiens GN=KRTAP5-1 PE=2 SV=1
          Length = 278

 Score = 33.9 bits (76), Expect = 0.38
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -1

Query: 334 GGRAGCGRWSGCRAPAGCTCGGH*SIWLGGCGSG 233
           G + GCG   GC+   G +CGG      GGCGSG
Sbjct: 172 GSKGGCGSCGGCKGGCG-SCGGS----KGGCGSG 200



 Score = 31.6 bits (70), Expect = 1.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 334 GGRAGCGRWSGCRAPAGCTCGGH*SIWLGGCGS 236
           G + GCG   GC+   G +CGG      GGCGS
Sbjct: 74  GSKGGCGSCGGCKGGCG-SCGGS----KGGCGS 101


>sp|A1JPQ9|BTUC_YERE8 Vitamin B12 import system permease protein
           btuC OS=Yersinia enterocolitica serotype O:8 / biotype
           1B (strain 8081) GN=btuC PE=3 SV=1
          Length = 335

 Score = 32.7 bits (73), Expect = 0.82
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 344 SFCWGKSWLWALEWL*GTSRLYMW 273
           S C G  WLW  +W   T RL++W
Sbjct: 36  SLCAGDIWLWPTQWFSETGRLFVW 59


>sp|Q7N3Q3|BTUC_PHOLL Vitamin B12 import system permease protein
           btuC OS=Photorhabdus luminescens subsp. laumondii
           GN=btuC PE=3 SV=1
          Length = 335

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -3

Query: 344 SFCWGKSWLWALEWL*GTSRLYMW 273
           S C G++W+W  +W   T +L++W
Sbjct: 36  SLCAGENWIWPNKWFSETGQLFVW 59


>sp|Q8Y210|LNT_RALSO Apolipoprotein N-acyltransferase OS=Ralstonia
           solanacearum GN=lnt PE=3 SV=1
          Length = 523

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -3

Query: 434 WSGYIGNEGMLKGWMRMKQKRGRLVRADSGSFCWGKSWLWALEWL*GT 291
           +S Y+     L  W+  +  RGR +   + +  +G +WL   EWL GT
Sbjct: 114 FSAYLALHPALAAWLWQRLARGRQLSGAASALVFGAAWL-VSEWLRGT 160


>sp|Q6D656|BTUC_ERWCT Vitamin B12 import system permease protein
           btuC OS=Erwinia carotovora subsp. atroseptica GN=btuC
           PE=3 SV=1
          Length = 331

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -3

Query: 344 SFCWGKSWLWALEWL*GTSRLYMW 273
           S C G+ W+W   WL    +L++W
Sbjct: 35  SLCAGERWIWPTAWLDDAQQLFVW 58


>sp|Q2TA51|KRA55_MOUSE Keratin associated protein 5-5 OS=Mus
           musculus GN=Krtap5-5 PE=2 SV=1
          Length = 241

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 334 GGRAGCGRWSGCRAPAGCTCGGH*SIWLGGCGS 236
           G + GCG   GC+   G +CGG      GGCGS
Sbjct: 59  GCKGGCGSCGGCKGSCG-SCGG----CKGGCGS 86


>sp|P23792|DISC_DROME Protein disconnected OS=Drosophila
           melanogaster GN=disco PE=1 SV=2
          Length = 568

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +1

Query: 205 YHLYVADLRHRIHNHLAK*TNGHHMYNLLVPYSHSNAHNQLFPQQKEPESALTSRP 372
           +HL ++      H+HL     GHH       + H + H+Q  PQQ+ P  A T+ P
Sbjct: 519 HHLTLSHHHQEQHHHLGHHHMGHH-------HHHHHQHHQQQPQQQSP--AATNAP 565


>sp|P20730|CHHB2_BOMMO Chorion class high-cysteine HCB protein 13
           OS=Bombyx mori PE=3 SV=1
          Length = 178

 Score = 30.4 bits (67), Expect = 4.2
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -1

Query: 322 GCGRWSGCRAPAGCTCGGH*SIWLGGCG 239
           GCG   GC    GC CGG      GGCG
Sbjct: 113 GCG--CGCGGCGGCGCGGCGGCGCGGCG 138


>sp|Q62220|KRA54_MOUSE Keratin-associated protein 5-4 OS=Mus
           musculus GN=Krtap5-4 PE=2 SV=1
          Length = 223

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 334 GGRAGCGRWSGCRAPAGCTCGGH*SIWLGGCGS 236
           G + GCG   GC+   G +CGG      GGCGS
Sbjct: 39  GCKGGCGSCGGCKGGCG-SCGG----CKGGCGS 66


>sp|Q9D5Z7|KRA52_MOUSE Keratin-associated protein 5-2 OS=Mus
           musculus GN=Krtap5-2 PE=2 SV=1
          Length = 189

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = -1

Query: 334 GGRAGCGRWSGCRAPAGCTCGGH*SIWLGGCGS 236
           G + GCG   GC+   G +CGG      GGCGS
Sbjct: 55  GCKGGCGSCGGCKGGCG-SCGG----CKGGCGS 82



 Score = 29.6 bits (65), Expect = 7.1
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 7/40 (17%)
 Frame = -1

Query: 334 GGRAGCGRWSGCRAPAGC-----TCGGH*SI--WLGGCGS 236
           G + GCG   GC +  GC     +CGG  S     GGCGS
Sbjct: 75  GCKGGCGSCGGCGSCGGCKGGCSSCGGCGSCGGCKGGCGS 114
tr_hit_id A7S6E5
Definition tr|A7S6E5|A7S6E5_NEMVE Predicted protein OS=Nematostella vectensis
Align length 62
Score (bit) 34.7
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919752|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_G02.
         (472 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7S6E5|A7S6E5_NEMVE Predicted protein OS=Nematostella vectens...    35   2.4  
tr|A5DPE1|A5DPE1_PICGU Putative uncharacterized protein OS=Pichi...    34   4.2  
tr|Q868B4|Q868B4_CAEEL Protein ZK643.8, partially confirmed by t...    33   5.4  
tr|A7IUT8|A7IUT8_PBCVM Putative uncharacterized protein m558R OS...    33   7.1  
tr|Q18880|Q18880_CAEEL Protein C56A3.1, partially confirmed by t...    33   9.3  
tr|B5SGB2|B5SGB2_RALSO Apolipoprotein n-acyltransferase (Alp n-a...    33   9.3  
tr|B5S8M8|B5S8M8_RALSO Apolipoprotein n-acyltransferase (Alp n-a...    33   9.3  
tr|A3RQ72|A3RQ72_RALSO Apolipoprotein N-acyltransferase OS=Ralst...    33   9.3  

>tr|A7S6E5|A7S6E5_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g243188 PE=4 SV=1
          Length = 1131

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 22/62 (35%), Positives = 23/62 (37%)
 Frame = -1

Query: 412 KACSRAG*G*SKSVGGL*ERILALFVGGRAGCGRWSGCRAPAGCTCGGH*SIWLGGCGSG 233
           K C   G G     GG          GG  GC    GC    GC CG       GGCG G
Sbjct: 505 KRCCGGGGGAPPITGGC---------GGCGGCSSCCGCGCDGGCGCGCGCGCG-GGCGCG 554

Query: 232 DV 227
           D+
Sbjct: 555 DI 556


>tr|A5DPE1|A5DPE1_PICGU Putative uncharacterized protein OS=Pichia
           guilliermondii GN=PGUG_05142 PE=4 SV=2
          Length = 651

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 16/34 (47%), Positives = 16/34 (47%)
 Frame = -1

Query: 334 GGRAGCGRWSGCRAPAGCTCGGH*SIWLGGCGSG 233
           GG  GCG   GC    GC  GG      GGCG G
Sbjct: 621 GGSGGCGGGGGCGGGGGCGGGGG-----GGCGGG 649


>tr|Q868B4|Q868B4_CAEEL Protein ZK643.8, partially confirmed by
           transcript evidence OS=Caenorhabditis elegans GN=grl-25
           PE=2 SV=2
          Length = 774

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/34 (50%), Positives = 17/34 (50%)
 Frame = -1

Query: 334 GGRAGCGRWSGCRAPAGCTCGGH*SIWLGGCGSG 233
           GG  GCG   GC AP    CGG      GGCG G
Sbjct: 61  GGGGGCGGGGGC-APPPAPCGGGCGGGGGGCGGG 93


>tr|A7IUT8|A7IUT8_PBCVM Putative uncharacterized protein m558R
           OS=Paramecium bursaria Chlorella virus MT325 GN=m558R
           PE=4 SV=1
          Length = 216

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
 Frame = -3

Query: 383 KQKRGRLVRADSGSFCWGKSWLWALEWL*GTSRLYMWWPLVYLAR----WLWIR 234
           + + G   R+  G + WG+ WLW+  W  G  R ++W    Y  R    W W R
Sbjct: 162 RSRCGFWYRSRCGFWYWGRCWLWSGFWYWG--RCWLWSGFWYWGRCWLDWSWCR 213


>tr|Q18880|Q18880_CAEEL Protein C56A3.1, partially confirmed by
           transcript evidence OS=Caenorhabditis elegans GN=grl-17
           PE=2 SV=1
          Length = 393

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/34 (47%), Positives = 16/34 (47%)
 Frame = -1

Query: 334 GGRAGCGRWSGCRAPAGCTCGGH*SIWLGGCGSG 233
           GG  GCG   GC    G  CGG      GGCG G
Sbjct: 97  GGGGGCGGGGGCGGGGGGGCGGGGG---GGCGGG 127


>tr|B5SGB2|B5SGB2_RALSO Apolipoprotein n-acyltransferase (Alp
           n-acyltransferase) OS=Ralstonia solanacearum IPO1609
           GN=lnt PE=4 SV=1
          Length = 503

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -3

Query: 434 WSGYIGNEGMLKGWMRMKQKRGRLVRADSGSFCWGKSWLWALEWL*GTSRLYMW 273
           +S Y+     L  W+  +  R R +   +G+  +G +WL A EWL GT    MW
Sbjct: 94  FSAYLALHPALAAWLWQRLARSRQLSGTAGALVFGAAWLVA-EWLRGT----MW 142


>tr|B5S8M8|B5S8M8_RALSO Apolipoprotein n-acyltransferase (Alp
           n-acyltransferase) OS=Ralstonia solanacearum GN=lnt PE=4
           SV=1
          Length = 503

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -3

Query: 434 WSGYIGNEGMLKGWMRMKQKRGRLVRADSGSFCWGKSWLWALEWL*GTSRLYMW 273
           +S Y+     L  W+  +  R R +   +G+  +G +WL A EWL GT    MW
Sbjct: 94  FSAYLALHPALAAWLWQRLARSRQLSGTAGALVFGAAWLVA-EWLRGT----MW 142


>tr|A3RQ72|A3RQ72_RALSO Apolipoprotein N-acyltransferase
           OS=Ralstonia solanacearum UW551 GN=RRSL_04156 PE=4 SV=1
          Length = 503

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = -3

Query: 434 WSGYIGNEGMLKGWMRMKQKRGRLVRADSGSFCWGKSWLWALEWL*GTSRLYMW 273
           +S Y+     L  W+  +  R R +   +G+  +G +WL A EWL GT    MW
Sbjct: 94  FSAYLALHPALAAWLWQRLARSRQLSGTAGALVFGAAWLVA-EWLRGT----MW 142