NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919760
Clone id YMU001_000128_G11
Library
Length 364
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000128_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGGCCAACAAGAAGGATCTGGTTTTCTGTTGCCCCTTTGACTCTCTCAAGACTCATGTAT
CTCTCTTTGATCTTTTTCATGCGAATTTGTGGAGACACCCTTATCTTGCTTGGCTCTTGG
AAACTACCCTCTACAGGTAGCACACCCCTTAGATGGCTTTAGCATTCCCTTTTTATCTTG
ATCGACCGCCCTTGGCCAACCTCCCTGTAGCGCCTCCTCTCTGGACTGTGAGCTCTCCAC
AATTGGCGGCCCTGCCCTCCTGTTCACGCCCGAGCTAGCCCCTCCTCCTCTCGGTTGCTA
CCAACGAACACCTTCTATCACTTGAAGCGATTGCAGATTCCCTTCCTCTAGTCAGGCTGC
TCAC
■■Homology search results ■■ -
sp_hit_id P26769
Definition sp|P26769|ADCY2_RAT Adenylate cyclase type 2 OS=Rattus norvegicus
Align length 47
Score (bit) 33.5
E-value 0.34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919760|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_G11.
         (364 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P26769|ADCY2_RAT Adenylate cyclase type 2 OS=Rattus norvegicu...    33   0.34 
sp|Q54XP6|IF2P_DICDI Eukaryotic translation initiation factor 5B...    32   0.76 
sp|Q3T8J9|GON4L_HUMAN GON-4-like protein OS=Homo sapiens GN=GON4...    32   0.76 
sp|Q80TL1|ADCY2_MOUSE Adenylate cyclase type 2 OS=Mus musculus G...    31   1.7  
sp|Q9BTC0|DIDO1_HUMAN Death-inducer obliterator 1 OS=Homo sapien...    31   2.2  
sp|P75366|Y421_MYCPN Uncharacterized protein MG294 homolog OS=My...    30   3.8  
sp|Q640M1|UT14A_MOUSE U3 small nucleolar RNA-associated protein ...    30   3.8  
sp|A8FEC5|ILVD_BACP2 Dihydroxy-acid dehydratase OS=Bacillus pumi...    30   4.9  
sp|Q6ZMY3|SPOC1_HUMAN SPOC domain-containing protein 1 OS=Homo s...    29   8.4  
sp|P28192|PTP2_CAEEL Tyrosine-protein phosphatase 2 OS=Caenorhab...    29   8.4  
sp|A8G4T4|ARGC_PROM2 N-acetyl-gamma-glutamyl-phosphate reductase...    29   8.4  

>sp|P26769|ADCY2_RAT Adenylate cyclase type 2 OS=Rattus norvegicus
           GN=Adcy2 PE=1 SV=1
          Length = 1090

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 20/47 (42%), Positives = 26/47 (55%)
 Frame = +1

Query: 58  YLSLIFFMRICGDTLILLGSWKLPSTGSTPLRWL*HSLFILIDRPWP 198
           +LSLIF + +C    +L  S K     ST L WL  S  I+ +RPWP
Sbjct: 635 FLSLIFILFVCFAGQLLQCSKK----ASTSLMWLLKSSGIIANRPWP 677


>sp|Q54XP6|IF2P_DICDI Eukaryotic translation initiation factor 5B
           OS=Dictyostelium discoideum GN=eif5b PE=3 SV=1
          Length = 1045

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = -2

Query: 246 PIVESSQSREEALQGGWPRAVDQDKKGMLKPSKGCATCRG*FPRAKQDKGVS-TNSHEKD 70
           P+VESS S EE  +     + ++D K   KPSK         P AKQ K V+ TN++   
Sbjct: 99  PVVESSSSEEEESESESEESSEEDTK--KKPSK---------PAAKQSKKVAPTNNNNNK 147

Query: 69  QREIHES 49
           ++ + ES
Sbjct: 148 KKPVVES 154


>sp|Q3T8J9|GON4L_HUMAN GON-4-like protein OS=Homo sapiens GN=GON4L
            PE=1 SV=1
          Length = 2241

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
 Frame = -3

Query: 305  VGSN--REEEGLARA*TGGQGRQLWRAHSPERRRYREVGQGRSIKIKREC*SHLRGVLPV 132
            VGS+  RE   +  A   GQG+ +    +PE R   E  Q R+++  R+    +   L V
Sbjct: 1893 VGSSPHREASPMPGAKEAGQGKDMMEEEAPEERESTEATQSRTVRTTRKGEMPVSAGLAV 1952

Query: 131  EGSFQEPSKIRVSPQI 84
              +   P ++ V+ ++
Sbjct: 1953 GSTLPSPREVTVTERL 1968


>sp|Q80TL1|ADCY2_MOUSE Adenylate cyclase type 2 OS=Mus musculus
           GN=Adcy2 PE=2 SV=2
          Length = 1090

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 19/47 (40%), Positives = 25/47 (53%)
 Frame = +1

Query: 58  YLSLIFFMRICGDTLILLGSWKLPSTGSTPLRWL*HSLFILIDRPWP 198
           +LSLIF + +C    +L  S K     S  L WL  S  I+ +RPWP
Sbjct: 635 FLSLIFILFVCFAGQLLQCSKK----ASASLLWLLKSSGIIANRPWP 677


>sp|Q9BTC0|DIDO1_HUMAN Death-inducer obliterator 1 OS=Homo sapiens
           GN=DIDO1 PE=1 SV=5
          Length = 2240

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -3

Query: 131 EGSFQEPSKIRVSPQIRMKKIKERYMSLERVKGATEN 21
           EGS +  S+ R  PQ     +KER  S E+VKG  ++
Sbjct: 112 EGSVESASETRSGPQSASTAVKERPASSEKVKGGDDH 148


>sp|P75366|Y421_MYCPN Uncharacterized protein MG294 homolog
           OS=Mycoplasma pneumoniae GN=MPN_421 PE=4 SV=1
          Length = 475

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 61  LSLIFFMRICGDTLILLGSWKLPSTGSTPLRW 156
           L +  F  +CG  + L+ +W+L   G T  RW
Sbjct: 438 LGIALFGLLCGTIVFLVNTWELKRLGKTDYRW 469


>sp|Q640M1|UT14A_MOUSE U3 small nucleolar RNA-associated protein 14
           homolog A OS=Mus musculus GN=Utp14a PE=2 SV=1
          Length = 767

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = -2

Query: 282 GASSGVNRRAGPPIVESSQSREE---ALQGGWPRAVDQDKKGMLKPSKGCATCRG*FPRA 112
           G+ SG NR   P   E+     E   + +G   +    D  G LKPS   A  +    R 
Sbjct: 51  GSLSGKNRWKLPERSEAGLKVSEFNVSSEGSGEKLALSDLLGPLKPSSSLAAVKKQLSRV 110

Query: 111 KQDKGVSTNSHEKDQREIH 55
           K  K +    H+++  +IH
Sbjct: 111 KSKKTLELPLHKREVEQIH 129


>sp|A8FEC5|ILVD_BACP2 Dihydroxy-acid dehydratase OS=Bacillus pumilus
           (strain SAFR-032) GN=ilvD PE=3 SV=1
          Length = 558

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -2

Query: 285 GGASSGVNRRAGPPIVESSQSREEALQGGWPRAVD 181
           GG   G+ R  GP IV  SQ  EEAL+G   R V+
Sbjct: 395 GGVQDGITRHEGPAIVFESQ--EEALEGIINRKVE 427


>sp|Q6ZMY3|SPOC1_HUMAN SPOC domain-containing protein 1 OS=Homo
           sapiens GN=SPOCD1 PE=2 SV=1
          Length = 1216

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 20/50 (40%), Positives = 26/50 (52%)
 Frame = -2

Query: 336 LQSLQVIEGVRW*QPRGGGASSGVNRRAGPPIVESSQSREEALQGGWPRA 187
           LQ+++    +    P G GASSG   RAG         R+EAL+GG  RA
Sbjct: 26  LQNMEGASSMPGLSPDGPGASSGPGVRAGS---RRKIPRKEALRGGSSRA 72


>sp|P28192|PTP2_CAEEL Tyrosine-protein phosphatase 2 OS=Caenorhabditis
            elegans GN=ptp-2 PE=2 SV=3
          Length = 1159

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +2

Query: 92   ETPLSCLALGNYPLQVAHPLDGFSIPFLS*----STALGQPPCSASSLDCELSTIG 247
            + PL  LA   YP  V  P D  S   LS      TAL    C+A++L C+L T G
Sbjct: 1064 DAPLLILA-HKYPPSVPSPTDSTSTLSLSILFNDDTALAFSICAATTLACQLETTG 1118
tr_hit_id B5GSM6
Definition tr|B5GSM6|B5GSM6_STRCL Putative uncharacterized protein OS=Streptomyces clavuligerus ATCC 27064
Align length 50
Score (bit) 35.8
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919760|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_G11.
         (364 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5GSM6|B5GSM6_STRCL Putative uncharacterized protein OS=Strep...    36   1.1  
tr|B4GWN4|B4GWN4_DROPE GL16400 OS=Drosophila persimilis GN=GL164...    33   5.5  
tr|Q1NF67|Q1NF67_9SPHN Putative uncharacterized protein OS=Sphin...    33   7.1  
tr|Q02CG8|Q02CG8_SOLUE ImpA domain protein OS=Solibacter usitatu...    33   9.3  
tr|Q75GW4|Q75GW4_ORYSJ Os03g0661800 protein OS=Oryza sativa subs...    33   9.3  
tr|A3AL40|A3AL40_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.3  

>tr|B5GSM6|B5GSM6_STRCL Putative uncharacterized protein
           OS=Streptomyces clavuligerus ATCC 27064 GN=SSCG_02350
           PE=4 SV=1
          Length = 309

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 12/50 (24%)
 Frame = +1

Query: 82  RICGDTLILLGSWKLPSTGSTPLRWL*HS------------LFILIDRPW 195
           ++CG T++ +GS +LPS G++  RWL H+            L+ L D PW
Sbjct: 237 QLCGVTVLDMGSQRLPSFGASLRRWLTHTLLGLIAIGALGVLWALFDHPW 286


>tr|B4GWN4|B4GWN4_DROPE GL16400 OS=Drosophila persimilis GN=GL16400
           PE=4 SV=1
          Length = 992

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 182 STALGQPPCSASSLDCELSTIGGPALLFTPELAPPPLGCYQRTP 313
           +T  G  P +    D +L+ + G       + APPPLG YQ TP
Sbjct: 116 NTISGSIPATGFGSDLQLNNLSGSRRQHPRQAAPPPLGQYQPTP 159


>tr|Q1NF67|Q1NF67_9SPHN Putative uncharacterized protein
           OS=Sphingomonas sp. SKA58 GN=SKA58_15147 PE=4 SV=1
          Length = 303

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 8/114 (7%)
 Frame = -2

Query: 321 VIEGVRW*QPRG-GGASSGVNRRAGPPIVESSQSREEALQGGWPRAVDQDKK-------G 166
           V  G R  QPRG  G ++G   RA PP   +    +  L+G   RAV+Q ++       G
Sbjct: 43  VSRGNRMNQPRGDAGRAAGTQPRAQPPRQMAPAQPDNRLRGNAARAVEQARERREQWQAG 102

Query: 165 MLKPSKGCATCRG*FPRAKQDKGVSTNSHEKDQREIHES*ESQRGNRKPDPSCW 4
             +   G    RG     +QD          D+R+     + +R +R+ D   W
Sbjct: 103 RAERRPGMDDRRGDRRDGRQDWRNERQDRRADRRDDR---QERRADRQDDRRDW 153


>tr|Q02CG8|Q02CG8_SOLUE ImpA domain protein OS=Solibacter usitatus
           (strain Ellin6076) GN=Acid_0235 PE=4 SV=1
          Length = 608

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = -2

Query: 321 VIEGVRW*QPRGGGASSGVNRRAGPPIVESSQSREEALQGGWPRAVDQDKKGM 163
           ++ G+RW + R  G+    +  A PP       +  AL+G W   ++  ++GM
Sbjct: 333 LLRGLRWGELRAAGSEIDASLLAAPPSDLRQDLKRLALEGNWTEVLEAAERGM 385


>tr|Q75GW4|Q75GW4_ORYSJ Os03g0661800 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0034D21.25 PE=2 SV=1
          Length = 579

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +2

Query: 194 GQPPCSASSLDCELSTIGGPALLFTPELAPPPLGCYQRTPS 316
           G PP   SS+ C+L + GG  +  +PE  P P  C  RTPS
Sbjct: 32  GMPP--PSSVPCQLQSTGGTGMESSPEHLPSP-PCQARTPS 69


>tr|A3AL40|A3AL40_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_011512 PE=4 SV=1
          Length = 537

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +2

Query: 194 GQPPCSASSLDCELSTIGGPALLFTPELAPPPLGCYQRTPS 316
           G PP   SS+ C+L + GG  +  +PE  P P  C  RTPS
Sbjct: 32  GMPP--PSSVPCQLQSTGGTGMESSPEHLPSP-PCQARTPS 69