NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919769
Clone id YMU001_000128_H11
Library
Length 500
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000128_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCACTCGCTGATCATCTCTAGACCGGCAGTAGCAATGGCGAGCTCTGTGGCTTCTTTGGC
AGTTGCTGCTCCCTCGTGCGCCCCGGCAGAGAGCCTATCTAAGAGCTTCTCCGGCCTCAG
GCCCACTACCCTCGCTGCCCCCAAGAGCGCCAACCCGCTCTCCATCTCCAACGGCAGCCG
CGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCTGTCCTA
CTTGCCGCCTTTGACAAGCGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCGGAAGGG
CTGGACCCCCTGCATTGAGTTCGACAAAATCGGAAGCGTATACCGAGAGCACTTCCATGG
CAGCGGCTACTACGATGGGCGATACTGGGTGATGTGGAAGTTGCCCATGTTTGGCTGCCA
AGATGCCGCCGCTGTGCTGCGTGAAATTGCAGAGTGCGCCAAGGAGTACCCCGAAGCCTT
CATCCGCGTGCTGGGCTTTG
■■Homology search results ■■ -
sp_hit_id Q40250
Definition sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa
Align length 141
Score (bit) 167.0
E-value 3.0e-41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919769|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_H11.
         (500 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   167   3e-41
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   166   4e-41
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   166   7e-41
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai...   165   1e-40
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   165   1e-40
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   164   2e-40
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   164   2e-40
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch...   164   2e-40
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   164   3e-40
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   163   4e-40
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   163   5e-40
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai...   162   8e-40
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   162   1e-39
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   162   1e-39
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch...   162   1e-39
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   161   1e-39
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   161   1e-39
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha...   161   1e-39
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   161   2e-39
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   160   2e-39
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch...   160   2e-39
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha...   160   2e-39
sp|Q39744|RBS2_FLAPR Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch...   160   3e-39
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   160   3e-39
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   159   5e-39
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   159   5e-39
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   159   5e-39
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   159   5e-39
sp|Q0INY7|RBS1_ORYSJ Ribulose bisphosphate carboxylase small cha...   159   5e-39

>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  167 bits (423), Expect = 3e-41
 Identities = 78/141 (55%), Positives = 99/141 (70%), Gaps = 6/141 (4%)
 Frame = +2

Query: 95  LSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTS 259
           L+  F+GL+     P T  A    + L  SNG RV  M VW P   KK+ETLSYLPPL+ 
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 260 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 436
           E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81  EALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 437 LREIAECAKEYPEAFIRVLGF 499
           ++E+ EC KEYP AFIRV+GF
Sbjct: 141 MKEVGECKKEYPNAFIRVIGF 161


>sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Helianthus annuus GN=RBCS PE=2 SV=1
          Length = 178

 Score =  166 bits (421), Expect = 4e-41
 Identities = 81/139 (58%), Positives = 101/139 (72%), Gaps = 8/139 (5%)
 Frame = +2

Query: 107 FSGLR-----PTTLAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 265
           F+GL+     PTT    K AN  S   SNG RV  M VW P   KK+ETLSYLPPLT  Q
Sbjct: 25  FTGLKSNAAFPTT----KKANDFSTLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQ 80

Query: 266 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 442
           +AK+VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D+A V++
Sbjct: 81  LAKEVDYLLRKKWVPCLEFELEHGFVYRENARSPGYYDGRYWTMWKLPMFGCTDSAQVMK 140

Query: 443 EIAECAKEYPEAFIRVLGF 499
           E+AEC KEYP+A+IR++GF
Sbjct: 141 ELAECKKEYPQAWIRIIGF 159


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  166 bits (419), Expect = 7e-41
 Identities = 70/111 (63%), Positives = 87/111 (78%)
 Frame = +2

Query: 167 SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPCIEFDKIGSVYR 346
           SNG RV  M VW P   KKFETLSYLPPLT EQ+ ++VD+++R GW PCIEF K+G VYR
Sbjct: 49  SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYR 108

Query: 347 EHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVLGF 499
           E+ +  GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K YP+ F R++GF
Sbjct: 109 EYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGF 159


>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
          Length = 178

 Score =  165 bits (417), Expect = 1e-40
 Identities = 77/139 (55%), Positives = 102/139 (73%), Gaps = 4/139 (2%)
 Frame = +2

Query: 95  LSKSFSGLRPTT-LAAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQ 265
           L+  F+GL+ +      K  N ++   SNGSRV+ M VW P   KKFETLSYLPPLT EQ
Sbjct: 21  LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80

Query: 266 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 442
           + K+V++++RKGW PC+EF+ + G V+R++    GYYDGRYW MW+LP+FG  DAA VL+
Sbjct: 81  LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140

Query: 443 EIAECAKEYPEAFIRVLGF 499
           E+AEC  EYPEAFIR++GF
Sbjct: 141 EVAECKAEYPEAFIRIIGF 159


>sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Hordeum vulgare PE=2 SV=1
          Length = 174

 Score =  165 bits (417), Expect = 1e-40
 Identities = 72/134 (53%), Positives = 95/134 (70%), Gaps = 3/134 (2%)
 Frame = +2

Query: 107 FSGLRPTT---LAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 277
           F GL+ T    ++   +A+  S+SNG R+  M VW     KKFETLSYLPPL++E + KQ
Sbjct: 16  FQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ 75

Query: 278 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 457
           VD+++R  W PC+EF K+G ++REH    GYYDGRYW MWKLPMFGC DA  VL E+ E 
Sbjct: 76  VDYLIRSKWVPCLEFSKVGFIFREHNASPGYYDGRYWTMWKLPMFGCTDATQVLNEVEEV 135

Query: 458 AKEYPEAFIRVLGF 499
            KEYP+A++R++GF
Sbjct: 136 KKEYPDAYVRIIGF 149


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  164 bits (416), Expect = 2e-40
 Identities = 79/135 (58%), Positives = 95/135 (70%), Gaps = 4/135 (2%)
 Frame = +2

Query: 107 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 274
           F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLPPL+ E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 275 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 454
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 455 CAKEYPEAFIRVLGF 499
             K YPE F+R++GF
Sbjct: 146 AKKAYPEYFVRIIGF 160


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  164 bits (416), Expect = 2e-40
 Identities = 79/135 (58%), Positives = 95/135 (70%), Gaps = 4/135 (2%)
 Frame = +2

Query: 107 FSGLRPTTL--AAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 274
           F+GLR +    A  K+ N LS   SNG RVS M VW P   KKFETLSYLPPL+ E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 275 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 454
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145

Query: 455 CAKEYPEAFIRVLGF 499
             K YPE F+R++GF
Sbjct: 146 AKKAYPEYFVRIIGF 160


>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
           1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
           PE=1 SV=2
          Length = 180

 Score =  164 bits (416), Expect = 2e-40
 Identities = 76/136 (55%), Positives = 99/136 (72%), Gaps = 5/136 (3%)
 Frame = +2

Query: 107 FSGLRPTTL--AAPKSANPLS--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 274
           F+GL+ +    A  K+ N ++   SNG RV+ M VW P   KKFETLSYLP LT  ++AK
Sbjct: 24  FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83

Query: 275 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           +VD+++R  W PC+EF+ + G VYREH +  GYYDGRYW MWKLP+FGC D+A VL+E+ 
Sbjct: 84  EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143

Query: 452 ECAKEYPEAFIRVLGF 499
           EC KEYP AFIR++GF
Sbjct: 144 ECKKEYPNAFIRIIGF 159


>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  164 bits (414), Expect = 3e-40
 Identities = 75/134 (55%), Positives = 95/134 (70%), Gaps = 3/134 (2%)
 Frame = +2

Query: 107 FSGLRPTTL--AAPKSANPL-SISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 277
           F GL+ T     A +S+  L ++SNG R+  M VW  Y NKKFETLSYLPPL+++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 278 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAEC 457
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA  V +E+ E 
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEA 136

Query: 458 AKEYPEAFIRVLGF 499
            K YP+AF RV+GF
Sbjct: 137 IKSYPDAFHRVIGF 150


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  163 bits (413), Expect = 4e-40
 Identities = 78/136 (57%), Positives = 95/136 (69%), Gaps = 5/136 (3%)
 Frame = +2

Query: 107 FSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIA 271
           F+GLR     P T  A K+ + L  SNG +VS M VW P   KKFETLSYLPPL+ E +A
Sbjct: 26  FNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 84

Query: 272 KQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           K+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+ V+ E+ 
Sbjct: 85  KEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVE 144

Query: 452 ECAKEYPEAFIRVLGF 499
           E  K YPE F+R++GF
Sbjct: 145 EAKKAYPEYFVRIIGF 160
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 135
Score (bit) 256.0
E-value 5.0e-67
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919769|Adiantum capillus-veneris mRNA, clone:
YMU001_000128_H11.
         (500 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   256   5e-67
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   180   3e-44
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   179   6e-44
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   176   5e-43
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   174   2e-42
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   172   8e-42
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   172   1e-41
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   169   7e-41
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   167   2e-40
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c...   167   2e-40
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   167   3e-40
tr|Q9ZWG6|Q9ZWG6_HORVU Ribulose bisphosphate carboxylase small c...   166   4e-40
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   166   4e-40
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   166   4e-40
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   166   6e-40
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   166   6e-40
tr|Q9SAW5|Q9SAW5_WHEAT Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9S7N3|Q9S7N3_AEGLO Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9SAX5|Q9SAX5_AEGSP Ribulose bisphosphate carboxylase small c...   165   1e-39
tr|Q9ZSS0|Q9ZSS0_9POAL Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q9SDY9|Q9SDY9_9POAL Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q9SBU5|Q9SBU5_9POAL Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q9SAX2|Q9SAX2_9POAL Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q9SNZ6|Q9SNZ6_9POAL Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q9SAW7|Q9SAW7_TRITU Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   164   2e-39
tr|Q9ZWH3|Q9ZWH3_9POAL Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|Q9ZWH2|Q9ZWH2_AEGBI Ribulose bisphosphate carboxylase small c...   164   3e-39
tr|Q9ZWH0|Q9ZWH0_AEGTA Ribulose bisphosphate carboxylase small c...   164   3e-39

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  256 bits (653), Expect = 5e-67
 Identities = 117/135 (86%), Positives = 127/135 (94%)
 Frame = +2

Query: 95  LSKSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAK 274
           LSKSFSGL+  TL APK ANPL+ISNGSR+SAMLVWKPYDNKKFETLSYLPPLT++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 275 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 454
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141

Query: 455 CAKEYPEAFIRVLGF 499
           CAKEYP AFIRVLGF
Sbjct: 142 CAKEYPTAFIRVLGF 156


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  180 bits (457), Expect = 3e-44
 Identities = 85/136 (62%), Positives = 100/136 (73%), Gaps = 3/136 (2%)
 Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
           K FSGL+ TTL+A K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 452 ECAKEYPEAFIRVLGF 499
           EC + +P  ++RVLGF
Sbjct: 147 ECKQSFPSCWVRVLGF 162


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  179 bits (454), Expect = 6e-44
 Identities = 85/136 (62%), Positives = 99/136 (72%), Gaps = 3/136 (2%)
 Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
           K FSGL+ TTL A K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A VLREI 
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146

Query: 452 ECAKEYPEAFIRVLGF 499
           EC + +P  ++RVLGF
Sbjct: 147 ECKQSFPSCWVRVLGF 162


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  176 bits (446), Expect = 5e-43
 Identities = 81/136 (59%), Positives = 100/136 (73%), Gaps = 3/136 (2%)
 Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
           K+FSGL+P TL + K+    ++ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 452 ECAKEYPEAFIRVLGF 499
           EC  ++P  ++RVLGF
Sbjct: 152 ECKSQFPSCWVRVLGF 167


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  174 bits (442), Expect = 2e-42
 Identities = 81/136 (59%), Positives = 99/136 (72%), Gaps = 3/136 (2%)
 Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
           K+FSGL+  TL + K+    S+ NGSRV  M VW P    KFET SYLPPLT +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181

Query: 452 ECAKEYPEAFIRVLGF 499
           EC  ++P  ++RVLGF
Sbjct: 182 ECKSQFPSCWVRVLGF 197


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  172 bits (436), Expect = 8e-42
 Identities = 80/136 (58%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
 Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
           K+FSGL+  TL   KS    S+ NGSRV  M VW P    KFET SYLPPL+ +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151

Query: 452 ECAKEYPEAFIRVLGF 499
           EC   YP  ++RVLGF
Sbjct: 152 ECKTSYPSCWVRVLGF 167


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  172 bits (435), Expect = 1e-41
 Identities = 79/136 (58%), Positives = 99/136 (72%), Gaps = 3/136 (2%)
 Frame = +2

Query: 101 KSFSGLRPTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQV 280
           K+FSGL+  TL + ++    S+ NGSRV  M VW P    KFET SYLPPLT ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 281 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 451
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++ VLREI 
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150

Query: 452 ECAKEYPEAFIRVLGF 499
           EC  ++P  ++RVLGF
Sbjct: 151 ECKTQFPSCWVRVLGF 166


>tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small
           chain OS=Panax ginseng PE=2 SV=1
          Length = 183

 Score =  169 bits (428), Expect = 7e-41
 Identities = 77/135 (57%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
 Frame = +2

Query: 107 FSGLRPTT-LAAPKSANPLSI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQ 277
           F+GL+ T      +  N ++   SNG RV  M VW P   KKFETLSYLP LT EQ++K+
Sbjct: 28  FTGLKSTAAFPVTRKVNDITSLPSNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKE 87

Query: 278 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 454
           VD+++R GW PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D++ VL+E+ E
Sbjct: 88  VDYLLRSGWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEE 147

Query: 455 CAKEYPEAFIRVLGF 499
           C KEYP A+IR++GF
Sbjct: 148 CKKEYPNAYIRIIGF 162


>tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small
           chain OS=Lactuca sativa PE=2 SV=1
          Length = 181

 Score =  167 bits (424), Expect = 2e-40
 Identities = 78/141 (55%), Positives = 99/141 (70%), Gaps = 6/141 (4%)
 Frame = +2

Query: 95  LSKSFSGLR-----PTTLAAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTS 259
           L+  F+GL+     P T  A    + L  SNG RV  M VW P   KK+ETLSYLPPL+ 
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLP-SNGGRVQCMKVWPPIGLKKYETLSYLPPLSD 80

Query: 260 EQIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAV 436
           E ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A V
Sbjct: 81  EALSKEIDYLIRNKWVPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQV 140

Query: 437 LREIAECAKEYPEAFIRVLGF 499
           ++E+ EC KEYP AFIRV+GF
Sbjct: 141 MKEVGECKKEYPNAFIRVIGF 161


>tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small
           chain OS=Picea sitchensis PE=2 SV=1
          Length = 159

 Score =  167 bits (424), Expect = 2e-40
 Identities = 74/122 (60%), Positives = 93/122 (76%)
 Frame = +2

Query: 134 AAPKSANPLSISNGSRVSAMLVWKPYDNKKFETLSYLPPLTSEQIAKQVDFMVRKGWTPC 313
           A PK++N    SNG RV  M VW PY+N KFETLSYLP LT EQ+ K+V++++R  W PC
Sbjct: 19  APPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPC 78

Query: 314 IEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAKEYPEAFIRVL 493
           +EFD+ G + R++    GYYDGRYWVMWKLPMFGC +A+ VL E+ ECAK YP+AFIRV+
Sbjct: 79  LEFDEDGIIKRKYGSTPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPKAFIRVI 138

Query: 494 GF 499
           GF
Sbjct: 139 GF 140