| BP919777 |
| Clone id |
YMU001_000129_A10 |
| Library |
YMU01 |
| Length |
560 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000129_A10. |
| Accession |
BP919777 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
- |
| Sequence |
TTTTTTTTTTTTTTTTGAAGACAAAATAATCTTATGTATAAGTGAAAATCAAAACTATTA ATAGTCACAATTTATAAGACATTCCATAACAAAGTCAGGAATGATTACTTCCTGTAGCAC AAAACCCACTTCGAGAACTCCCAAGGGTGCAGACGCCAATACTTCAAACTGCAGCTGAAT TATTGTAGAGGCCCTCAGATAATAAATTTACATAAACTGTACAAGAGCAAGCACACTGGC AATACTAGTGATGCCTCACTCGTTCATCTCCCAGCCAGTAGTTTTTCTGCATGGGGCCAC AAGGACCTTCCTCACCAGATAATTCATGCGGAAACTTTCTTAAGAAAGATTCTAATACCT TCTTCAGCCTTTGGGGAAGCTGGTCCAACACCTTGTCAAGTTCAGCTCTCAGGTCGTATC AAATCCTTGGACCCCACTCACAAGCATAAAGGAGCCAAGTGGGCTCTTTTGGGGCATTGT TTGCCCCCAGTAAATGCAGATACTTTGCTGACACTACCTCATAATTCTTTGCTGTCTCCA ATACGTGGGCACTGCGAGCG |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q9WSV7 |
| Definition |
sp|Q9WSV7|CAPSD_TTVV5 Capsid protein OS=Torque teno virus (isolate Human/Japan/SANBAN/1999) |
| Align length |
66 |
| Score (bit) |
32.3 |
| E-value |
1.4 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TBP9 |
| Definition |
tr|A9TBP9|A9TBP9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
| Align length |
101 |
| Score (bit) |
108.0 |
| E-value |
1.0e-22 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919777|Adiantum capillus-veneris mRNA, clone: YMU001_000129_A10. (530 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TBP9|A9TBP9_PHYPA Predicted protein (Fragment) OS=Physcomit... 108 1e-22 tr|A9TTX2|A9TTX2_PHYPA Predicted protein OS=Physcomitrella paten... 101 3e-20 tr|Q501D1|Q501D1_ARATH At1g04090 OS=Arabidopsis thaliana PE=2 SV=1 100 5e-20 tr|O64496|O64496_ARATH F20D22.14 protein OS=Arabidopsis thaliana... 100 5e-20 tr|Q9FND1|Q9FND1_ARATH Genomic DNA, chromosome 5, P1 clone:MRH10... 99 1e-19 tr|A7Q1K9|A7Q1K9_VITVI Chromosome chr7 scaffold_44, whole genome... 97 5e-19 tr|A5ADX9|A5ADX9_VITVI Putative uncharacterized protein OS=Vitis... 97 7e-19 tr|A5BKD6|A5BKD6_VITVI Putative uncharacterized protein (Chromos... 96 1e-18 tr|A7QR76|A7QR76_VITVI Chromosome chr13 scaffold_149, whole geno... 89 2e-16 tr|Q940K1|Q940K1_ARATH Putative uncharacterized protein (At5g184... 87 4e-16 tr|Q8LBJ8|Q8LBJ8_ARATH Putative uncharacterized protein OS=Arabi... 87 5e-16 tr|A2XCD5|A2XCD5_ORYSI Putative uncharacterized protein OS=Oryza... 84 3e-15 tr|Q9M8Z1|Q9M8Z1_ARATH T6K12.3 protein (AT3g04350/T6K12_3) OS=Ar... 84 4e-15 tr|B6UAX6|B6UAX6_MAIZE Putative uncharacterized protein OS=Zea m... 83 8e-15 tr|Q8LLP6|Q8LLP6_ORYSJ Os03g0721300 protein OS=Oryza sativa subs... 83 1e-14 tr|Q10RX6|Q10RX6_ORYSJ Pre-mRNA processing protein PRP39, putati... 83 1e-14 tr|Q10RX5|Q10RX5_ORYSJ Os03g0142900 protein OS=Oryza sativa subs... 83 1e-14 tr|A2XLH5|A2XLH5_ORYSI Putative uncharacterized protein OS=Oryza... 83 1e-14 tr|A2Q3A8|A2Q3A8_MEDTR Putative uncharacterized protein OS=Medic... 80 6e-14 tr|A2Q3B2|A2Q3B2_MEDTR Putative uncharacterized protein OS=Medic... 79 1e-13 tr|A2Q3B0|A2Q3B0_MEDTR Putative uncharacterized protein OS=Medic... 79 1e-13 tr|A2Q3B1|A2Q3B1_MEDTR Putative uncharacterized protein OS=Medic... 79 2e-13 tr|Q3EBG3|Q3EBG3_ARATH Uncharacterized protein At2g44260.2 OS=Ar... 77 5e-13 tr|O64861|O64861_ARATH Expressed protein (Putative uncharacteriz... 77 5e-13 tr|O64858|O64858_ARATH Expressed protein (Putative uncharacteriz... 70 9e-11 tr|Q6ZLA9|Q6ZLA9_ORYSJ Os07g0575900 protein OS=Oryza sativa subs... 67 6e-10 tr|B8B7R1|B8B7R1_ORYSI Putative uncharacterized protein OS=Oryza... 67 6e-10 tr|A3BLG3|A3BLG3_ORYSJ Putative uncharacterized protein OS=Oryza... 67 6e-10 tr|Q9S7Q5|Q9S7Q5_ARATH F1C9.34 protein (F28J7.21 protein) OS=Ara... 65 2e-09 tr|Q9SGI4|Q9SGI4_ARATH F28J7.20 protein (Putative uncharacterize... 65 3e-09
>tr|A9TBP9|A9TBP9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_143102 PE=4 SV=1 Length = 537
Score = 108 bits (271), Expect = 1e-22 Identities = 51/101 (50%), Positives = 65/101 (64%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 A S VL ++ ++V SA Y+H G +AP+EP WL Y EWGP+I YD + LDK L Sbjct: 437 ALSTIVLNSSVKFQVFSADYMHQRGDKDAPEEPAWLQYMREWGPKIEYDKKKYLDKFLKF 496
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDERV 227 LP +L+ LE L K P E+ GEEGP GP +KN W GDER+ Sbjct: 497 LPSKLRNSLEEILDKLPSEVMGEEGPTGPKEKNMWFGDERI 537
>tr|A9TTX2|A9TTX2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_150522 PE=4 SV=1 Length = 560
Score = 101 bits (251), Expect = 3e-20 Identities = 47/100 (47%), Positives = 62/100 (62%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 A S H+L+++ + V SA Y+H G +AP EPTWL Y WGP+I YD + + K+L Sbjct: 460 ALSTHLLDSSVKFRVFSADYMHQRGDPDAPVEPTWLHYMRPWGPKIVYDRKKNVTKMLGL 519
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDER 230 +P L L L K PHE+ G+EGP GP +KN W GDER Sbjct: 520 MPTMLHGSLGDVLGKLPHEVMGQEGPTGPREKNMWFGDER 559
>tr|Q501D1|Q501D1_ARATH At1g04090 OS=Arabidopsis thaliana PE=2 SV=1 Length = 572
Score = 100 bits (249), Expect = 5e-20 Identities = 45/100 (45%), Positives = 69/100 (69%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 ARS +++++ YE+++A+YL N+ EP WL Y EWGP++ YD R E+++++++ Sbjct: 475 ARSELLVDSSSRYEIIAAEYL---SGNSVLAEPPWLQYMREWGPKVVYDSREEIERLVNR 531
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDER 230 P+ ++ L + LRK P ELSGEEGP GP +KN W GDER Sbjct: 532 FPRTVRVSLATVLRKLPVELSGEEGPTGPKEKNNWYGDER 571
>tr|O64496|O64496_ARATH F20D22.14 protein OS=Arabidopsis thaliana GN=F20D22.14 PE=4 SV=1 Length = 1345
Score = 100 bits (249), Expect = 5e-20 Identities = 45/100 (45%), Positives = 69/100 (69%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 ARS +++++ YE+++A+YL N+ EP WL Y EWGP++ YD R E+++++++ Sbjct: 1248 ARSELLVDSSSRYEIIAAEYL---SGNSVLAEPPWLQYMREWGPKVVYDSREEIERLVNR 1304
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDER 230 P+ ++ L + LRK P ELSGEEGP GP +KN W GDER Sbjct: 1305 FPRTVRVSLATVLRKLPVELSGEEGPTGPKEKNNWYGDER 1344
>tr|Q9FND1|Q9FND1_ARATH Genomic DNA, chromosome 5, P1 clone:MRH10 (Putative uncharacterized protein At5g43950) (Putative uncharacterized protein At5g43950; MRH10.5) OS=Arabidopsis thaliana GN=At5g43950/MRH10.5 PE=2 SV=1 Length = 566
Score = 99.0 bits (245), Expect = 1e-19 Identities = 48/100 (48%), Positives = 69/100 (69%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 A+S ++++ YE+V+A+YL A EP WL Y EWGP+I Y+ R+E++K+ ++ Sbjct: 471 AKSDLFVDSSLKYEIVAAEYLR-----GAVVEPPWLGYMREWGPKIVYNSRSEIEKLNER 525
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDER 230 LP RL+ +++ LRK P ELSGEEGP GP +KN W GDER Sbjct: 526 LPWRLRSWVDAVLRKIPVELSGEEGPTGPKEKNNWFGDER 565
>tr|A7Q1K9|A7Q1K9_VITVI Chromosome chr7 scaffold_44, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028505001 PE=4 SV=1 Length = 556
Score = 97.1 bits (240), Expect = 5e-19 Identities = 47/100 (47%), Positives = 64/100 (64%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 ARS ++++ YE++ A+YL + EP WL Y EWGP I YD R+ELDK+++ Sbjct: 460 ARSNLYVDSSIEYEIIGAEYL----GDGVVTEPCWLQYMREWGPNIVYDSRSELDKMINF 515
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDER 230 LP ++ +E+ KFP ELSGEEGP GP +K W GDER Sbjct: 516 LPAMVRYSVENIFNKFPLELSGEEGPTGPKEKKNWAGDER 555
>tr|A5ADX9|A5ADX9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015561 PE=4 SV=1 Length = 569
Score = 96.7 bits (239), Expect = 7e-19 Identities = 47/100 (47%), Positives = 64/100 (64%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 ARS ++++ YE++ A+YL + EP WL Y EWGP I YD R+ELDK+++ Sbjct: 473 ARSNLYVDSSIEYEIIGAEYL----GDGVVTEPCWLQYMREWGPTIVYDSRSELDKMINF 528
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDER 230 LP ++ +E+ KFP ELSGEEGP GP +K W GDER Sbjct: 529 LPAMVRYSVENIFNKFPLELSGEEGPTGPKEKKNWAGDER 568
>tr|A5BKD6|A5BKD6_VITVI Putative uncharacterized protein (Chromosome undetermined scaffold_62, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00032834001 PE=4 SV=1 Length = 568
Score = 95.5 bits (236), Expect = 1e-18 Identities = 47/100 (47%), Positives = 64/100 (64%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 ARS ++++ NY++V+A+YL + A EP WL Y EWGP I YD RAEL+K++ Sbjct: 472 ARSKFFIDSSTNYQIVAAEYL----GDTAVVEPNWLQYMREWGPTIVYDSRAELEKIISL 527
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDER 230 LP + +E+ FP EL GEEGP GP +KN W+ DER Sbjct: 528 LPVFFRFSVENIFDLFPTELYGEEGPTGPKEKNNWVEDER 567
>tr|A7QR76|A7QR76_VITVI Chromosome chr13 scaffold_149, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003709001 PE=4 SV=1 Length = 521
Score = 88.6 bits (218), Expect = 2e-16 Identities = 45/99 (45%), Positives = 60/99 (60%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 A+S V++T Y VV+A+YL +A EP WL Y +WGP+I YDL AE+ +V Sbjct: 427 AKSKMVMDTGTRYIVVAAEYL-----GSAVVEPPWLNYYRKWGPKISYDLAAEIKEVEKL 481
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDE 233 LP +LK E ++ P+E+ GEEGP GP K W GDE Sbjct: 482 LPGKLKSAFEKLVKSLPNEILGEEGPTGPKMKKNWDGDE 520
>tr|Q940K1|Q940K1_ARATH Putative uncharacterized protein (At5g18490) OS=Arabidopsis thaliana GN=At5g18490 PE=2 SV=1 Length = 553
Score = 87.4 bits (215), Expect = 4e-16 Identities = 44/99 (44%), Positives = 63/99 (63%) Frame = -2
Query: 529 ARSAHVLETAKNYEVVSAKYLHLLGANNAPKEPTWLLYACEWGPRI*YDLRAELDKVLDQ 350 A+S +++++++ Y +V+A+YL A EP WL + EWGP I YD AE++K++D Sbjct: 460 AKSKYMVDSSQRYRIVAAEYL----GEGAVSEPYWLQFMREWGPTIVYDSAAEINKIIDL 515
Query: 349 LPQRLKKVLESFLRKFPHELSGEEGPCGPMQKNYWLGDE 233 LP L+ ES FP EL GEEGP GP +K+ W GDE Sbjct: 516 LPLILRNSFESL---FPIELYGEEGPTGPKEKDNWEGDE 551
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