BP919788 |
Clone id |
YMU001_000129_B10 |
Library |
YMU01 |
Length |
525 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000129_B10. |
Accession |
BP919788 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTTTTTTTTTTTTTTTTGATATGGAGTGCTCAATAGCTTTCCATACAAAAAATTTATT TACATTGGTCTTGTATAATAGGATGAAACAAATGGGCCTTTGCGGTGTTCTAGAAAAGTG TATTGTACCACTTAGAACTTCCCTAAGGTATGTAAAGTGCAAGAGGTAGTAGCATTTTCA AGCTACTACCTTTCTAGAATGGATATTGATGGTTGCTCCCCATCTCAAATTCCTGGTGCT GCTATGTTCATGTTGCATTGTCTGGCTTTCAACAAAGCAAGATGGTGTGTCTTGCCGAAT CTTGGATTGCATTTTGTGAATATAGTTCACAAGTGTGTCGTATCGATGCTTTAACTCCCT CAGCTTCTTCTCCAAAATTTTGGCTTCATCTCTATAAGCTTCCATGTCATCCAACAAAGG TAGTGTTCGCACATTCACAGTCGTCTGAATTCTTTCTCGCTTTGATCTAAGCTTCTCACA GATTATTTTGATATGTTGAAACTCCAACCGCGCTTTACTAAGCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8RXD6 |
Definition |
sp|Q8RXD6|BRE1A_ARATH E3 ubiquitin-protein ligase BRE1-like 1 OS=Arabidopsis thaliana |
Align length |
69 |
Score (bit) |
35.0 |
E-value |
0.18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q245H7 |
Definition |
tr|Q245H7|Q245H7_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 |
Align length |
62 |
Score (bit) |
36.2 |
E-value |
0.84 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919788|Adiantum capillus-veneris mRNA, clone: YMU001_000129_B10. (492 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q245H7|Q245H7_TETTH Putative uncharacterized protein OS=Tetra... 36 0.84 tr|A9S5Y0|A9S5Y0_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.1 tr|Q385X7|Q385X7_9TRYP Putative uncharacterized protein OS=Trypa... 36 1.1 tr|B4QKV6|B4QKV6_DROSI GD13047 OS=Drosophila simulans GN=GD13047... 36 1.1 tr|B7ZC95|B7ZC95_DANRE Novel protein similar to vertebrate discs... 35 1.9 tr|Q3YIX2|Q3YIX2_SARSC Paramyosin (Fragment) OS=Sarcoptes scabie... 35 1.9 tr|B2M1Y3|B2M1Y3_SARSC Paramyosin OS=Sarcoptes scabiei PE=2 SV=1 35 1.9 tr|A9UYG7|A9UYG7_MONBE Predicted protein OS=Monosiga brevicollis... 35 1.9 tr|A8CSW5|A8CSW5_SARSC Paramyosin OS=Sarcoptes scabiei PE=2 SV=1 35 1.9 tr|B2Q4N5|B2Q4N5_PROST Putative uncharacterized protein OS=Provi... 35 2.4 tr|Q8I5X3|Q8I5X3_PLAF7 Putative uncharacterized protein OS=Plasm... 35 2.4 tr|A2DSF8|A2DSF8_TRIVA Putative uncharacterized protein OS=Trich... 34 3.2 tr|B6IAT2|B6IAT2_ECOSE Putative uncharacterized protein OS=Esche... 34 3.3 tr|B5Z1Y5|B5Z1Y5_ECO5E Multiple antibiotic resistance protein Ma... 34 3.3 tr|B2U166|B2U166_SHIB3 Multiple antibiotic resistance protein Ma... 34 3.3 tr|Q7BBV6|Q7BBV6_SHIFL MarC OS=Shigella flexneri GN=marC PE=4 SV=1 34 3.3 tr|B7URQ5|B7URQ5_ECO27 Predicted transporter OS=Escherichia coli... 34 3.3 tr|B7MMZ2|B7MMZ2_ECOLX Putative wide-spectrum exporter OS=Escher... 34 3.3 tr|B7L8K8|B7L8K8_ECOLX Multiple antibiotic resistance protein ma... 34 3.3 tr|B7A2K0|B7A2K0_ECO57 Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3XA62|B3XA62_ECOLX Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3WXN0|B3WXN0_SHIDY Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3WGR8|B3WGR8_ECOLX Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3IE29|B3IE29_ECOLX Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3I6V8|B3I6V8_ECOLX Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3HXX7|B3HXX7_ECOLX Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3H7R1|B3H7R1_ECOLX Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3BWD3|B3BWD3_ECO57 Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3BKE9|B3BKE9_ECO57 Multiple antibiotic resistance protein Ma... 34 3.3 tr|B3B165|B3B165_ECO57 Multiple antibiotic resistance protein Ma... 34 3.3
>tr|Q245H7|Q245H7_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210 GN=TTHERM_00730360 PE=4 SV=1 Length = 582
Score = 36.2 bits (82), Expect = 0.84 Identities = 18/62 (29%), Positives = 36/62 (58%) Frame = -2
Query: 458 EKLRSKRERIQTTVNVRTLPLLDDMEAYRDEAKILEKKLRELKHRYDTLVNYIHKMQSKI 279 EKL+ + +++QT ++V L + YRDE + L +LR++ +Y +VN + ++ Sbjct: 162 EKLQIRNKQLQTELDVVNQKLKNQERDYRDEKEKLNSQLRDITLQYSKIVNRETQFNNEF 221
Query: 278 RQ 273 R+ Sbjct: 222 RK 223
>tr|A9S5Y0|A9S5Y0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163008 PE=4 SV=1 Length = 479
Score = 35.8 bits (81), Expect = 1.1 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%) Frame = -2
Query: 491 RLEFQHIKIICEKLRSKRERIQTTVNVRTLP-LLDDMEAYRDEAKILEKKLRELKHRYDT 315 R++ IK ++ K E Q + + T+P LLDDM+ R++ EK + LK +Y Sbjct: 351 RVKLSKIKASIVAMKRKMEASQKKIVIVTIPKLLDDMDFLREDIDAEEKVVNNLKKQYQD 410
Query: 314 LVNYIHKMQSKI 279 L I + + K+ Sbjct: 411 LNFRIEERKKKL 422
>tr|Q385X7|Q385X7_9TRYP Putative uncharacterized protein OS=Trypanosoma brucei GN=Tb11.02.1950 PE=4 SV=1 Length = 646
Score = 35.8 bits (81), Expect = 1.1 Identities = 20/63 (31%), Positives = 35/63 (55%) Frame = -2
Query: 449 RSKRERIQTTVNVRTLPLLDDMEAYRDEAKILEKKLRELKHRYDTLVNYIHKMQSKIRQD 270 R RER++ + VR ++ + Y+DE + L KKL L ++D L+ ++Q + +Q Sbjct: 583 RGGRERMEKEL-VRQAVEIESLRRYKDEVEELRKKLAALAAQHDLLMQMYGQLQEETQQQ 641
Query: 269 TPS 261 T S Sbjct: 642 TKS 644
>tr|B4QKV6|B4QKV6_DROSI GD13047 OS=Drosophila simulans GN=GD13047 PE=4 SV=1 Length = 762
Score = 35.8 bits (81), Expect = 1.1 Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 6/99 (6%) Frame = -2
Query: 488 LEFQHIKIICEKLRSKRERIQTTVNVRTLPLLDDMEAYRDE-----AKILEKKL-RELKH 327 LE + +K + LR ++ ++ TV R P + ++++++ ++ +EKK+ R +H Sbjct: 485 LEIESLKTNHDPLRLQKPSVKETVKSRD-PSYIEFDSFKEDRSPRKSEAMEKKMVRSREH 543
Query: 326 RYDTLVNYIHKMQSKIRQDTPSCFVESQTMQHEHSSTRN 210 Y + +Y MQS P F +S + EH R+ Sbjct: 544 SYHEIDSYKAPMQSDKAPKLPQNFTQSNNIPKEHLPQRD 582
>tr|B7ZC95|B7ZC95_DANRE Novel protein similar to vertebrate discs, large homolog 5 (Drosophila) (DLG5) OS=Danio rerio GN=CH211-225G5.1-001 PE=4 SV=1 Length = 1926
Score = 35.0 bits (79), Expect = 1.9 Identities = 25/95 (26%), Positives = 47/95 (49%) Frame = -2
Query: 485 EFQHIKIICEKLRSKRERIQTTVNVRTLPLLDDMEAYRDEAKILEKKLRELKHRYDTLVN 306 E + I+ +C+ LR +R+R + + L LDDM R++A ++L+ELK Sbjct: 589 ERESIRTLCDNLRRERDRAVSDL-ADALRNLDDMRKQRNDA---ARELKELK-------- 636
Query: 305 YIHKMQSKIRQDTPSCFVESQTMQHEHSSTRNLRW 201 KM+S++ ++ C + + + T +L W Sbjct: 637 --EKMESQLDKEARFCQLMAHSSHDSAIDTDSLEW 669
>tr|Q3YIX2|Q3YIX2_SARSC Paramyosin (Fragment) OS=Sarcoptes scabiei PE=2 SV=1 Length = 679
Score = 35.0 bits (79), Expect = 1.9 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = -2
Query: 461 CEKLRSKRERIQTTVNVRTLPLLDDMEAYRDEAKILEKKLRELKHRYDTLVNYIHK---M 291 C L ++ R+Q+ V V L+ D+E A+ LEK++ +L+ L N + + + Sbjct: 139 CSSLEKQKSRLQSEVEV----LIMDLEKATTHAQQLEKRVAQLEKLNLDLKNKLEEVTML 194
Query: 290 QSKIRQDTPSCFVESQTMQHEHSSTRNLR 204 + +++ + E Q +QHE+ R+ R Sbjct: 195 MEQAQKEARAKAAELQKLQHEYEKLRDQR 223
>tr|B2M1Y3|B2M1Y3_SARSC Paramyosin OS=Sarcoptes scabiei PE=2 SV=1 Length = 875
Score = 35.0 bits (79), Expect = 1.9 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = -2
Query: 461 CEKLRSKRERIQTTVNVRTLPLLDDMEAYRDEAKILEKKLRELKHRYDTLVNYIHK---M 291 C L ++ R+Q+ V V L+ D+E A+ LEK++ +L+ L N + + + Sbjct: 335 CSSLEKQKSRLQSEVEV----LIMDLEKATTHAQQLEKRVAQLEKLNLDLKNKLEEVTML 390
Query: 290 QSKIRQDTPSCFVESQTMQHEHSSTRNLR 204 + +++ + E Q +QHE+ R+ R Sbjct: 391 MEQAQKEARAKAAELQKLQHEYEKLRDQR 419
>tr|A9UYG7|A9UYG7_MONBE Predicted protein OS=Monosiga brevicollis GN=32272 PE=4 SV=1 Length = 1247
Score = 35.0 bits (79), Expect = 1.9 Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 7/92 (7%) Frame = -2
Query: 476 HIKIICEKLRSKRERIQTTVNVRTLP-------LLDDMEAYRDEAKILEKKLRELKHRYD 318 H+ + + L+ +R+++ RT L+DD E R E LE+KLRE +H+ + Sbjct: 600 HLHVDQQHLQEAVDRLESLAAERTAEFQDARRRLVDDRERVRREIAELERKLREARHKEE 659
Query: 317 TLVNYIHKMQSKIRQDTPSCFVESQTMQHEHS 222 L I K +I E ++ + S Sbjct: 660 RLEKDIAKEDERIAAAEQDLVAERSQVEAQRS 691
>tr|A8CSW5|A8CSW5_SARSC Paramyosin OS=Sarcoptes scabiei PE=2 SV=1 Length = 875
Score = 35.0 bits (79), Expect = 1.9 Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 3/89 (3%) Frame = -2
Query: 461 CEKLRSKRERIQTTVNVRTLPLLDDMEAYRDEAKILEKKLRELKHRYDTLVNYIHK---M 291 C L ++ R+Q+ V V L+ D+E A+ LEK++ +L+ L N + + + Sbjct: 335 CSSLEKQKSRLQSEVEV----LIMDLEKATTHAQQLEKRVAQLEKLNLDLKNKLEEVTML 390
Query: 290 QSKIRQDTPSCFVESQTMQHEHSSTRNLR 204 + +++ + E Q +QHE+ R+ R Sbjct: 391 MEQAQKEARAKAAELQKLQHEYEKLRDQR 419
>tr|B2Q4N5|B2Q4N5_PROST Putative uncharacterized protein OS=Providencia stuartii ATCC 25827 GN=PROSTU_03846 PE=4 SV=1 Length = 432
Score = 34.7 bits (78), Expect = 2.4 Identities = 19/57 (33%), Positives = 33/57 (57%) Frame = -2
Query: 437 ERIQTTVNVRTLPLLDDMEAYRDEAKILEKKLRELKHRYDTLVNYIHKMQSKIRQDT 267 E +Q + V TL LD AYR + K+ +K L ++KH + + I+K+++ R+ T Sbjct: 165 ESVQVALKVTTLDYLD---AYRRQTKLCDKALSDIKHAFKGANSKINKIEALSRKLT 218
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