BP919790 |
Clone id |
YMU001_000129_B12 |
Library |
YMU01 |
Length |
515 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000129_B12. |
Accession |
BP919790 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1946Contig1 |
Sequence |
CTCCAAGGGAGTGCAAAACTATTCTGGGGTTTAACCAGATTTTCTATTTCATGTCATCTT GTGATATAGTACAAATACCTACTAAACAACCTCCTTAAGTGGTTGTTACCTACCAAAAAC ACACTCTAGCTTGAGAGCTGTCCCATTGAATTTCAGCTATGCTCAAAACCTCTATGAGCA ACCATCGGCCAATAGCAATGCCCTTGTAATCCGAGCTGTGTTATGCCCAAACCATCCTCC CTCATGTTAAGATCTTTGTTATAGGATTTGATTGCATTGCCCTTCTTCTACCATATTTCT CAACCACAAACTAGTCAAACTCCTTGCAGCAACAATCGCCATCCTTGAAATGATGAAGGC AATGAGAATCTTTTATAATAATGTCACGTCTCTCTTTCCTCGAAATCAACTTGGCTACAT CATGGCAATCCGCACACACTCGGAGATTTTTTGCTACTCGGATGGTTGTGCCTTCTGGTG TACTCAAAAGCCCCAGAGCTACGGCTAACTTCTCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P0C7R1 |
Definition |
sp|P0C7R1|PPR74_ARATH Pentatricopeptide repeat-containing protein At1g47580, chloroplastic OS=Arabidopsis thaliana |
Align length |
66 |
Score (bit) |
88.6 |
E-value |
2.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9P0W0 |
Definition |
tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
66 |
Score (bit) |
95.1 |
E-value |
2.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919790|Adiantum capillus-veneris mRNA, clone: YMU001_000129_B12. (515 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea... 95 2e-18 tr|A7P4F3|A7P4F3_VITVI Chromosome chr4 scaffold_6, whole genome ... 94 5e-18 tr|A7NZW4|A7NZW4_VITVI Chromosome chr6 scaffold_3, whole genome ... 92 1e-17 tr|A5ANS6|A5ANS6_VITVI Putative uncharacterized protein OS=Vitis... 92 1e-17 tr|A7QDH6|A7QDH6_VITVI Chromosome chr10 scaffold_81, whole genom... 92 2e-17 tr|A9T938|A9T938_PHYPA Predicted protein OS=Physcomitrella paten... 92 2e-17 tr|A7R0D7|A7R0D7_VITVI Chromosome chr6 scaffold_305, whole genom... 91 3e-17 tr|A2YZT8|A2YZT8_ORYSI Putative uncharacterized protein OS=Oryza... 91 3e-17 tr|Q6DXS0|Q6DXS0_GOSHI Putative pentatricopeptide repeat protein... 91 4e-17 tr|Q10PG4|Q10PG4_ORYSJ Os03g0235200 protein OS=Oryza sativa subs... 91 4e-17 tr|B4FKV9|B4FKV9_MAIZE Putative uncharacterized protein OS=Zea m... 91 4e-17 tr|B2ZAU5|B2ZAU5_GOSAR Putative pentatricopeptide OS=Gossypium a... 91 4e-17 tr|B2ZAR9|B2ZAR9_GOSRA Putative pentatricopeptide repeat protein... 91 4e-17 tr|A7QEC5|A7QEC5_VITVI Chromosome chr1 scaffold_84, whole genome... 90 6e-17 tr|A7NTL0|A7NTL0_VITVI Chromosome chr18 scaffold_1, whole genome... 90 6e-17 tr|A7PX41|A7PX41_VITVI Chromosome chr12 scaffold_36, whole genom... 90 7e-17 tr|Q60EX3|Q60EX3_ORYSJ Os05g0370000 protein OS=Oryza sativa subs... 89 1e-16 tr|B8AJP0|B8AJP0_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|A7P2L5|A7P2L5_VITVI Chromosome chr1 scaffold_5, whole genome ... 89 1e-16 tr|Q9LFW4|Q9LFW4_ARATH PCMP-H2 protein (Fragment) OS=Arabidopsis... 89 2e-16 tr|Q6DXT4|Q6DXT4_GOSHI Putative pentatricopeptide repeat protein... 89 2e-16 tr|A7PCR5|A7PCR5_VITVI Chromosome chr17 scaffold_12, whole genom... 89 2e-16 tr|Q8H8N2|Q8H8N2_ORYSJ Os03g0775400 protein OS=Oryza sativa subs... 88 2e-16 tr|B8BEJ2|B8BEJ2_ORYSI Putative uncharacterized protein OS=Oryza... 88 2e-16 tr|B2ZAT1|B2ZAT1_9ROSI Putative pentatricopeptide repeat protein... 88 2e-16 tr|A3AN62|A3AN62_ORYSJ Putative uncharacterized protein OS=Oryza... 88 2e-16 tr|A2XMF9|A2XMF9_ORYSI Putative uncharacterized protein OS=Oryza... 88 2e-16 tr|A7PWF7|A7PWF7_VITVI Chromosome chr8 scaffold_34, whole genome... 88 3e-16 tr|A7PDL8|A7PDL8_VITVI Chromosome chr17 scaffold_12, whole genom... 88 3e-16 tr|A5AJ01|A5AJ01_VITVI Putative uncharacterized protein OS=Vitis... 88 3e-16
>tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 370
Score = 95.1 bits (235), Expect = 2e-18 Identities = 40/66 (60%), Positives = 50/66 (75%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 EKLA+A G++STP GTTIRV KNLRVC DCH K ISR R+I+++D+H HHFKDG Sbjct: 304 EKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFKDGQ 363
Query: 334 CCCKEF 317 C C ++ Sbjct: 364 CSCGDY 369
>tr|A7P4F3|A7P4F3_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032129001 PE=4 SV=1 Length = 612
Score = 93.6 bits (231), Expect = 5e-18 Identities = 41/66 (62%), Positives = 51/66 (77%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 EKLA+A GL+ST EGTTIRV KNLR+C DCHD AK+IS +R+II++D HHFKDG Sbjct: 546 EKLAIAFGLISTSEGTTIRVVKNLRICNDCHDAAKIISGIVKREIIVRDRSRFHHFKDGV 605
Query: 334 CCCKEF 317 C C ++ Sbjct: 606 CSCSDY 611
>tr|A7NZW4|A7NZW4_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024670001 PE=4 SV=1 Length = 624
Score = 92.4 bits (228), Expect = 1e-17 Identities = 39/66 (59%), Positives = 51/66 (77%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 EKLA+A GL++TP GT IR+ KNLRVCADCH+ K IS+ +R+II++D HHFKDG Sbjct: 558 EKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGF 617
Query: 334 CCCKEF 317 C CK++ Sbjct: 618 CSCKDY 623
>tr|A5ANS6|A5ANS6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027683 PE=4 SV=1 Length = 539
Score = 92.4 bits (228), Expect = 1e-17 Identities = 39/66 (59%), Positives = 51/66 (77%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 EKLA+A GL++TP GT IR+ KNLRVCADCH+ K IS+ +R+II++D HHFKDG Sbjct: 473 EKLAIAFGLINTPPGTAIRIVKNLRVCADCHEATKFISKVYKREIIVRDRIRYHHFKDGF 532
Query: 334 CCCKEF 317 C CK++ Sbjct: 533 CSCKDY 538
>tr|A7QDH6|A7QDH6_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035842001 PE=4 SV=1 Length = 814
Score = 92.0 bits (227), Expect = 2e-17 Identities = 38/64 (59%), Positives = 51/64 (79%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 EK+A+A G+LS P G T+RV KNLRVC DCH++AK +S+ +RDII++DS+ HHFKDG Sbjct: 748 EKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKFMSKMVKRDIILRDSNRFHHFKDGS 807
Query: 334 CCCK 323 C C+ Sbjct: 808 CSCR 811
>tr|A9T938|A9T938_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_192787 PE=4 SV=1 Length = 804
Score = 91.7 bits (226), Expect = 2e-17 Identities = 38/66 (57%), Positives = 51/66 (77%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 EKLA+A GL+STP GT IR++KNLRVC DCH K IS+ +R+II +D+H HHFK+G+ Sbjct: 738 EKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDAHRFHHFKNGE 797
Query: 334 CCCKEF 317 C C ++ Sbjct: 798 CSCGDY 803
>tr|A7R0D7|A7R0D7_VITVI Chromosome chr6 scaffold_305, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00011403001 PE=4 SV=1 Length = 868
Score = 90.9 bits (224), Expect = 3e-17 Identities = 38/66 (57%), Positives = 51/66 (77%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 E+LA+A GL++TP GT I++ KNLRVC DCH V KLIS+ E RDI+++DS+ HHFK G Sbjct: 802 ERLAIAFGLIATPPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGS 861
Query: 334 CCCKEF 317 C C ++ Sbjct: 862 CSCGDY 867
>tr|A2YZT8|A2YZT8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_30870 PE=4 SV=1 Length = 410
Score = 90.9 bits (224), Expect = 3e-17 Identities = 39/66 (59%), Positives = 50/66 (75%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 EKLAVALGL+ST GT +RV KNLR+C DCH+ K IS ERR+I ++D++ HHFKDG Sbjct: 344 EKLAVALGLISTSHGTPLRVIKNLRICGDCHEAMKFISSFERREIYVRDTNRFHHFKDGK 403
Query: 334 CCCKEF 317 C C ++ Sbjct: 404 CSCADY 409
>tr|Q6DXS0|Q6DXS0_GOSHI Putative pentatricopeptide repeat protein OS=Gossypium hirsutum PE=4 SV=1 Length = 805
Score = 90.5 bits (223), Expect = 4e-17 Identities = 39/66 (59%), Positives = 52/66 (78%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 EKLA+A GLL+ P TIRV KNLRVC DCH++AK +S++ RR+I+++DS+ HHFKDG Sbjct: 739 EKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDSNRFHHFKDGY 798
Query: 334 CCCKEF 317 C C+ F Sbjct: 799 CSCRGF 804
>tr|Q10PG4|Q10PG4_ORYSJ Os03g0235200 protein OS=Oryza sativa subsp. japonica GN=Os03g0235200 PE=2 SV=1 Length = 641
Score = 90.5 bits (223), Expect = 4e-17 Identities = 38/66 (57%), Positives = 53/66 (80%) Frame = -2
Query: 514 EKLAVALGLLSTPEGTTIRVAKNLRVCADCHDVAKLISRKERRDIIIKDSHCLHHFKDGD 335 E+LAVA G+++TPEG+ I+V KNLR+C DCH KLIS+ +RDII++DS+ HHFKDG Sbjct: 575 ERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRFHHFKDGI 634
Query: 334 CCCKEF 317 C C+++ Sbjct: 635 CSCRDY 640
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