BP919806 |
Clone id |
YMU001_000129_D04 |
Library |
YMU01 |
Length |
576 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000129_D04. |
Accession |
BP919806 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACCCTTCAGCTAACTTCCACAAGATGTTGGCCATGATTTACTGAAGGAGGATTCCTCTC CATAGACACTAATGCAAACTGTTGGTATCACTCTAGGGTTATCAACAGTTATTTGCATAG CCATATGGAGCTACGAAAGTTAATTTTTGCGTTGCCAAACAAATTATTTAACTGTTGGTA GCACTCTAGGGTTATCAACAGTTATTTGCATATCCATATGGACCTAAGAAAAAAACAGGA AAAGCCAAACAGATCATGCTTTGATTTTATTGCTTTCTTGTTGCTTATGCCAGTGCAGTA CTTCCTTGTAGGATAGTTCCCCTCCAAAAATGTCAAGGGCACTTCCAACAGTGACATTGA CAACTCCACCTCCAGCAACACGAATTAGCTCTAGATCTTCAAGCTGGGACACACCTCCTG CGTATGTGACAGGTACAGATGACCATTGTCCAAGCAAAGAAACCAGCTCCTCATCCATAC CGAGTCTTTTTCCTTCAACATCAACACCATGTACAAGAAATTCGTCTGCATATTCAGAAA GGGTTCCCAATGTATGCTTGGATATTGTTAAATCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O82782 |
Definition |
sp|O82782|HIS4_ARATH 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Arabidopsis thaliana |
Align length |
101 |
Score (bit) |
113.0 |
E-value |
8.0e-25 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919806|Adiantum capillus-veneris mRNA, clone: YMU001_000129_D04. (576 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|O82782|HIS4_ARATH 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 113 8e-25 sp|Q10184|HIS4_SCHPO 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 88 3e-17 sp|Q7RXQ8|HIS4_NEUCR 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 87 8e-17 sp|Q6C2U0|HIS4_YARLI 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 83 1e-15 sp|Q75AP1|HIS4_ASHGO 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 83 1e-15 sp|Q6CQL7|HIS4_KLULA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 79 1e-14 sp|Q6FPN5|HIS4_CANGA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 72 2e-12 sp|Q9HFV5|HIS4_CANAL 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 71 3e-12 sp|P40545|HIS4_YEAST 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 71 4e-12 sp|Q6BUV9|HIS4_DEBHA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 70 8e-12 sp|Q8TYD6|HIS4_METKA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 45 2e-04 sp|A1VEV5|HIS4_DESVV 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 44 6e-04 sp|P62353|HIS4_DESVH 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 44 6e-04 sp|Q58927|HIS4_METJA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 40 0.006 sp|A0B7W4|HIS4_METTP 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 40 0.008 sp|Q9RDX2|HIS6_LEGPN Imidazole glycerol phosphate synthase subun... 39 0.014 sp|Q311Y2|HIS4_DESDG 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 39 0.019 sp|A5CRW2|HIS6_CLAM3 Imidazole glycerol phosphate synthase subun... 39 0.024 sp|O26931|HIS4_METTH 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 39 0.024 sp|A6QCU4|HIS6_SULNB Imidazole glycerol phosphate synthase subun... 37 0.071 sp|Q3ZY29|HIS6_DEHSC Imidazole glycerol phosphate synthase subun... 37 0.071 sp|Q88UE3|HIS6_LACPL Imidazole glycerol phosphate synthase subun... 36 0.12 sp|Q6AF73|HIS6_LEIXX Imidazole glycerol phosphate synthase subun... 36 0.16 sp|A2SQR0|HIS4_METLZ 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 36 0.16 sp|A6T376|HIS6_JANMA Imidazole glycerol phosphate synthase subun... 35 0.21 sp|Q2NHB3|HIS4_METST 1-(5-phosphoribosyl)-5-[(5-phosphoribosylam... 35 0.21 sp|A4G9I6|HIS6_HERAR Imidazole glycerol phosphate synthase subun... 35 0.27 sp|Q3Z7F5|HIS6_DEHE1 Imidazole glycerol phosphate synthase subun... 35 0.27 sp|A9WD80|HIS6_CHLAA Imidazole glycerol phosphate synthase subun... 35 0.27 sp|Q7MPP3|HIS62_VIBVY Putative imidazole glycerol phosphate synt... 35 0.27
>sp|O82782|HIS4_ARATH 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, chloroplastic OS=Arabidopsis thaliana GN=HIS6 PE=2 SV=1 Length = 304
Score = 113 bits (282), Expect = 8e-25 Identities = 55/101 (54%), Positives = 74/101 (73%) Frame = -3
Query: 574 DLTISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWSSVPVTYAGGVSQLED 395 D+ + + +L L ++DEFLVHGVDVEGK+LG+DEELV+LLG +S +PVTYAGGV+ ++D Sbjct: 202 DVILDEKSLEFLGGFSDEFLVHGVDVEGKKLGIDEELVALLGNYSPIPVTYAGGVTVMDD 261
Query: 394 LELIRXXXXXXXXXXXGSALDIFGGELSYKEVLHWHKQQES 272 +E I+ GSALDIFGG L YK+V+ WH +Q S Sbjct: 262 VERIKDAGKGRVDVTVGSALDIFGGNLPYKDVVAWHHKQHS 302
>sp|Q10184|HIS4_SCHPO 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Schizosaccharomyces pombe GN=SPAC3F10.09 PE=2 SV=1 Length = 264
Score = 87.8 bits (216), Expect = 3e-17 Identities = 42/95 (44%), Positives = 59/95 (62%) Frame = -3
Query: 565 ISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWSSVPVTYAGGVSQLEDLEL 386 +++ L LS+Y EFL+H DVEG G+DE+LV LG+W +P TYAGG +EDL+L Sbjct: 162 LNEENLDLLSQYCSEFLIHAADVEGLCKGIDEDLVIKLGEWVKIPTTYAGGGRSIEDLDL 221
Query: 385 IRXXXXXXXXXXXGSALDIFGGELSYKEVLHWHKQ 281 + GSALDIFGG L + V+ W+++ Sbjct: 222 VDKLSKGKVDLTIGSALDIFGGVLEFTRVVAWNRR 256
>sp|Q7RXQ8|HIS4_NEUCR 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Neurospora crassa GN=his-6 PE=3 SV=1 Length = 257
Score = 86.7 bits (213), Expect = 8e-17 Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 1/100 (1%) Frame = -3
Query: 574 DLTISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWSSVPVTYAGGVSQLED 395 D+ +S+ ++ L Y EFL+H D EG + G+DE+LV L +W S+PVTYAGG LED Sbjct: 158 DMEVSEESIKALEPYCSEFLIHAADNEGLQKGIDEKLVQRLSEWCSIPVTYAGGGRNLED 217
Query: 394 LELIRXXXXXXXXXXXGSALDIFGGE-LSYKEVLHWHKQQ 278 LE ++ GSALD FGG+ ++ +E + W+++Q Sbjct: 218 LETVKRLSGGKVDLTIGSALDCFGGKGVTLQECVEWNRRQ 257
>sp|Q6C2U0|HIS4_YARLI 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Yarrowia lipolytica GN=HIS6 PE=3 SV=1 Length = 264
Score = 82.8 bits (203), Expect = 1e-15 Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 5/103 (4%) Frame = -3
Query: 574 DLTISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWSS----VPVTYAGGVS 407 D ++K TL L+++ DEFL+H DVEG G+DEELV+ LG+W PVTYAGG Sbjct: 159 DTEVNKETLEQLAKHCDEFLIHAADVEGLCNGIDEELVTKLGEWLEEGHLPPVTYAGGAK 218
Query: 406 QLEDLELIRXXXXXXXXXXXGSALDIFGGE-LSYKEVLHWHKQ 281 ++DL L++ GSALD+FGG+ + + + + W+++ Sbjct: 219 NIDDLALVQKLSHGKVDLTYGSALDVFGGDKVKFSDCVEWNEK 261
>sp|Q75AP1|HIS4_ASHGO 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Ashbya gossypii GN=HIS6 PE=3 SV=1 Length = 263
Score = 82.8 bits (203), Expect = 1e-15 Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 6/104 (5%) Frame = -3
Query: 571 LTISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWSS-----VPVTYAGGVS 407 L +++ TL LSEY EFL+H DVEG G+DEELV+ LG W++ V V YAGG + Sbjct: 160 LALNEETLALLSEYCSEFLIHAADVEGLCRGIDEELVAQLGLWAAQLRGDVRVVYAGGAN 219
Query: 406 QLEDLELIRXXXXXXXXXXXGSALDIFGGEL-SYKEVLHWHKQQ 278 + DL L++ GSALDIFGG L +++ W++QQ Sbjct: 220 SVADLGLVKRLSGGRVDLTYGSALDIFGGSLVRFQDCCAWNRQQ 263
>sp|Q6CQL7|HIS4_KLULA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Kluyveromyces lactis GN=HIS6 PE=3 SV=1 Length = 267
Score = 79.3 bits (194), Expect = 1e-14 Identities = 42/106 (39%), Positives = 63/106 (59%), Gaps = 5/106 (4%) Frame = -3
Query: 574 DLTISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWSS----VPVTYAGGVS 407 DL +++ T L +Y DEFLVH DVEG G+DEELV+ L +W++ V + YAGG Sbjct: 162 DLELNERTFADLCQYTDEFLVHAADVEGLCNGIDEELVAHLYKWTADIPKVKIVYAGGAK 221
Query: 406 QLEDLELIRXXXXXXXXXXXGSALDIFGGEL-SYKEVLHWHKQQES 272 ++DL L+ GSALDIFGG L +++ + W+ ++ + Sbjct: 222 SVDDLRLVEKLSHGKIDLTFGSALDIFGGSLVKFEDCVQWNHEKHA 267
>sp|Q6FPN5|HIS4_CANGA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Candida glabrata GN=HIS6 PE=3 SV=1 Length = 261
Score = 72.4 bits (176), Expect = 2e-12 Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 6/103 (5%) Frame = -3
Query: 571 LTISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWS-----SVPVTYAGGVS 407 L ++K T LS+Y DEFL+H DVEG G++ +LV+ L +W+ V + YAGG Sbjct: 157 LELNKETFTELSKYTDEFLIHAADVEGLCKGIETDLVTKLYEWTKDINKEVKIVYAGGAK 216
Query: 406 QLEDLELIRXXXXXXXXXXXGSALDIFGGEL-SYKEVLHWHKQ 281 + DLEL+ GS+LDIFGG+L +++ W+ + Sbjct: 217 SISDLELVDKLSNGTVDLTYGSSLDIFGGKLVRFQDCCEWNSK 259
>sp|Q9HFV5|HIS4_CANAL 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Candida albicans GN=HIS6 PE=3 SV=1 Length = 279
Score = 71.2 bits (173), Expect = 3e-12 Identities = 39/102 (38%), Positives = 57/102 (55%), Gaps = 5/102 (4%) Frame = -3
Query: 574 DLTISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWSSV----PVTYAGGVS 407 D +S L +S Y DEFL+H DVEG G+DE+LV LG+W V + YAGG Sbjct: 172 DTILSAEFLLKVSAYCDEFLIHAADVEGLCKGIDEKLVENLGEWCPVGFEEKIVYAGGAK 231
Query: 406 QLEDLELIRXXXXXXXXXXXGSALDIFGGEL-SYKEVLHWHK 284 + DL+ + GS+LDIF G+L ++ +++ W+K Sbjct: 232 SINDLDTVAKLSKGKVDLTYGSSLDIFSGKLVNFTDLVEWNK 273
>sp|P40545|HIS4_YEAST 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Saccharomyces cerevisiae GN=HIS6 PE=1 SV=1 Length = 261
Score = 70.9 bits (172), Expect = 4e-12 Identities = 39/104 (37%), Positives = 60/104 (57%), Gaps = 5/104 (4%) Frame = -3
Query: 574 DLTISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWS----SVPVTYAGGVS 407 DL ++ T L +Y +EFL+H DVEG G+DE LVS L +W+ + + YAGG Sbjct: 157 DLELNADTFRELRKYTNEFLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAK 216
Query: 406 QLEDLELIRXXXXXXXXXXXGSALDIFGGEL-SYKEVLHWHKQQ 278 ++DL+L+ GS+LDIFGG L +++ W+++Q Sbjct: 217 SVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCCRWNEKQ 260
>sp|Q6BUV9|HIS4_DEBHA 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase OS=Debaryomyces hansenii GN=HIS6 PE=3 SV=2 Length = 276
Score = 70.1 bits (170), Expect = 8e-12 Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 5/99 (5%) Frame = -3
Query: 565 ISKHTLGTLSEYADEFLVHGVDVEGKRLGMDEELVSLLGQWS----SVPVTYAGGVSQLE 398 +S LG +S+Y DEFL+H DVEG G+D LV+ LG+W + YAGG ++ Sbjct: 176 LSAEFLGEVSQYCDEFLIHAADVEGLCNGIDVNLVAKLGEWCPEGFEGKIVYAGGARSVK 235
Query: 397 DLELIRXXXXXXXXXXXGSALDIFGGEL-SYKEVLHWHK 284 DL+ + GSALD+FGG+L + +++ W++ Sbjct: 236 DLDTVSKLSDDKVDLTYGSALDVFGGKLVKFDDLVSWNE 274
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6ATY5 |
Definition |
tr|Q6ATY5|Q6ATY5_ORYSJ Putative N'-5'-phosphoribosyl-formimino-5-aminoimidazole-4- carboxamide ribonucleotide isomerase OS=Oryza sativa subsp. japonica |
Align length |
99 |
Score (bit) |
123.0 |
E-value |
8.0e-27 |
Report |
|