BP919812
Clone id YMU001_000129_D10
Library
Length 575
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000129_D10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGGTGGGGGGGATCAATCAATCATTATTATGTATCCACGGGGGGCAAATGATGATGCATT
GTCATAACCATAATACATTTGGCATTCTGAATTTATTTGTCAAGGTCGTTAAGAAAAGCC
AAACCATGTTGCACCCACAACTCCAACAGGTAGCTTCCATAATCAATCATCTTCCCAGCC
TCACATGAGATCTACTATAAGGCAATACCTACTATAACAACCCCTCACAAGTCATAGCGG
GGCACCTTACAATGAAAGATGTTGCCACTGATGTCCTTCGAGAGTGTCACTTTTCATTCC
TTAAGAATTCCCAAATGTCCACATCCATAATCATATGAGGACTACGGCTGAAAGGCAGTA
CAATAAGATGTCATGGGTGGGGAGTGACAAATGGTAATGTCAAATGGTATCCAGCCCTCG
AAGTGCACATGAACTACATACAGCGTGCCATCTCATCTCTGTAATACCAACCCTAATAAG
AGTATGAAAGCCCTCTCTATAAAGTATTGCAACACTTGGAGAGCCACCGTTACACAAAGC
TATCCTCGCATCTTTTTGCATGTCGATTCCCATGT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919812|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_D10.
(575 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q0BZ13
Definition tr|Q0BZ13|Q0BZ13_HYPNA Ornithine cyclodeaminase/mu-crystallin family protein OS=Hyphomonas neptunium (strain ATCC 15444)
Align length 47
Score (bit) 35.4
E-value 2.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919812|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_D10.
(575 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0BZ13|Q0BZ13_HYPNA Ornithine cyclodeaminase/mu-crystallin fa... 35 2.3
tr|Q8NN40|Q8NN40_CORGL Putative uncharacterized protein Cgl2373 ... 34 6.5
tr|A4QG93|A4QG93_CORGB Putative uncharacterized protein OS=Coryn... 34 6.5

>tr|Q0BZ13|Q0BZ13_HYPNA Ornithine cyclodeaminase/mu-crystallin
family protein OS=Hyphomonas neptunium (strain ATCC
15444) GN=HNE_2590 PE=4 SV=1
Length = 319

Score = 35.4 bits (80), Expect = 2.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -3

Query: 543 IALCNGGSPSVAILYREGFHTLIRVGITEMRWHAVCSSCALRGLDTI 403
I + + + +L REG HTL +G E WH C+ A+R D I
Sbjct: 108 IRTASASAMATDVLAREGAHTLAILGTGEQAWHHACALPAVRPFDEI 154


>tr|Q8NN40|Q8NN40_CORGL Putative uncharacterized protein Cgl2373
(Putative uncharacterized protein) OS=Corynebacterium
glutamicum GN=Cgl2373 PE=4 SV=1
Length = 155

Score = 33.9 bits (76), Expect = 6.5
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3

Query: 366 RCHGWGVTNGNVKWYPALE 422
RC GW VT+GNVKW ++E
Sbjct: 78 RCFGWSVTDGNVKWIYSME 96


>tr|A4QG93|A4QG93_CORGB Putative uncharacterized protein
OS=Corynebacterium glutamicum (strain R) GN=cgR_2255
PE=4 SV=1
Length = 155

Score = 33.9 bits (76), Expect = 6.5
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3

Query: 366 RCHGWGVTNGNVKWYPALE 422
RC GW VT+GNVKW ++E
Sbjct: 78 RCFGWSVTDGNVKWIYSME 96