BP919815 |
Clone id |
YMU001_000129_E01 |
Library |
YMU01 |
Length |
523 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000129_E01. |
Accession |
BP919815 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3726Contig1 |
Sequence |
CTGCTTTTGTACATTGGCTTGTCTTCTTCGTCGTGATCAAGTTGGGTATTTTGAATTACC ACCATAGGAGGCCACACGATCATCACGTCTTTTGTGGCATCAATATTCCGCAAACCCTTC CACTTGCCAAACTTAGTTTCTGCCAAAGAACCAGTTCCGGCTCTCCGTACTTCAAGGTCG TCTTCCAGTACATTGGCAAATTCTCTATGAAGACCAATCCTTTTTGTTCTGTGAGTTTTT GCATGAGCTAAAAGAGGTTGCAAGCCTCTATACCACTCTATCGCTCCAACACCCCCATAG CAGGCAGGGCAGTGCCACTGACGATCATGCTCCATAATTTGTTCATTGGACAAATCATCA AGTGTGTCAAAAAAGGACTGAAACCATTTATTTCGCTTTCTCGTCTCAAGACTTTCTACA CTTGCATCAGAATCACACGGGTCGCTTCCAATCCAGTCACTATCATCATCAAAGTCAGCG TCTGATAATGCGCTATCAGAATCAGCTCTTAGTGGCACCTCCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A1Y2B7 |
Definition |
sp|A1Y2B7|SGS3_MAIZE Protein SUPPRESSOR OF GENE SILENCING 3 homolog OS=Zea mays |
Align length |
139 |
Score (bit) |
160.0 |
E-value |
3.0e-39 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QR25 |
Definition |
tr|A7QR25|A7QR25_VITVI Chromosome undetermined scaffold_147, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
138 |
Score (bit) |
163.0 |
E-value |
5.0e-39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919815|Adiantum capillus-veneris mRNA, clone: YMU001_000129_E01. (523 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QR25|A7QR25_VITVI Chromosome undetermined scaffold_147, who... 163 5e-39 tr|A9T5P8|A9T5P8_PHYPA Suppressor of silencing OS=Physcomitrella... 162 1e-38 tr|A5ANH9|A5ANH9_VITVI Putative uncharacterized protein OS=Vitis... 162 1e-38 tr|A9PJV9|A9PJV9_POPJC Putative uncharacterized protein OS=Popul... 139 8e-32 tr|Q2QWE8|Q2QWE8_ORYSJ Os12g0197700 protein OS=Oryza sativa subs... 134 4e-30 tr|B8BNK4|B8BNK4_ORYSI Putative uncharacterized protein OS=Oryza... 131 2e-29 tr|A2Q480|A2Q480_MEDTR Emr1, related OS=Medicago truncatula GN=M... 129 9e-29 tr|A3CFS0|A3CFS0_ORYSJ Putative uncharacterized protein OS=Oryza... 117 3e-25 tr|B8LNA2|B8LNA2_PICSI Putative uncharacterized protein OS=Picea... 94 4e-18 tr|A9NW99|A9NW99_PICSI Putative uncharacterized protein OS=Picea... 94 4e-18 tr|B2KZJ3|B2KZJ3_PICAB Suppressor of gene silencing 3 protein (F... 70 6e-11 tr|A4H9U1|A4H9U1_LEIBR Putative uncharacterized protein OS=Leish... 37 0.45 tr|A7UUA4|A7UUA4_ANOGA AGAP006460-PA OS=Anopheles gambiae GN=AGA... 36 1.0 tr|B6THW0|B6THW0_MAIZE Putative uncharacterized protein OS=Zea m... 35 1.7 tr|A9T7R7|A9T7R7_PHYPA Predicted protein OS=Physcomitrella paten... 34 3.8 tr|O29700|O29700_ARCFU Threonine synthase (ThrC-1) OS=Archaeoglo... 34 5.0 tr|A6QXK9|A6QXK9_AJECN Predicted protein OS=Ajellomyces capsulat... 33 6.5 tr|Q4RP42|Q4RP42_TETNG Chromosome 1 SCAF15008, whole genome shot... 33 8.5 tr|Q49LT1|Q49LT1_TETNG XK-related protein 2a OS=Tetraodon nigrov... 33 8.5
>tr|A7QR25|A7QR25_VITVI Chromosome undetermined scaffold_147, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003647001 PE=4 SV=1 Length = 555
Score = 163 bits (412), Expect = 5e-39 Identities = 79/138 (57%), Positives = 102/138 (73%) Frame = -3
Query: 431 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 252 SD S +S ETRK++KWF+SFF+ LD L+ E+I E RQWHCPAC GG GAI+WYRGLQPL Sbjct: 120 SDTSQKSHETRKKSKWFKSFFEILDSLTIEEINEPARQWHCPACQGGPGAIDWYRGLQPL 179
Query: 251 LAHAKTHRTKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGKWKGLRNIDATKDVMIVW 72 + HAKT +KR+ LHRE A +L+++L RR + A FGKWKGL ++ KD IVW Sbjct: 180 ITHAKTKGSKRVKLHRELAELLDEEL-YRRGTSVVPAGEAFGKWKGL--YESVKDHEIVW 236
Query: 71 PPMVVIQNTQLDHDEEDK 18 PPMV+I NT+L+ D ++K Sbjct: 237 PPMVIIMNTRLEQDADEK 254
>tr|A9T5P8|A9T5P8_PHYPA Suppressor of silencing OS=Physcomitrella patens subsp. patens GN=SGS1501 PE=4 SV=1 Length = 725
Score = 162 bits (409), Expect = 1e-38 Identities = 70/134 (52%), Positives = 100/134 (74%), Gaps = 1/134 (0%) Frame = -3
Query: 416 ESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPLLAHAK 237 ES E +K+ KWF+ FF LD +++ Q+ EHDRQWHCPAC GG GAI+W+RGL PL HA+ Sbjct: 287 ESHEDQKKIKWFRDFFQDLDSMTDAQLNEHDRQWHCPACKGGPGAIDWFRGLVPLATHAR 346
Query: 236 THRTKRIGLHREFANVLEDDLEVRRAGTGSL-AETKFGKWKGLRNIDATKDVMIVWPPMV 60 T R++R+ LHR+FA +LE++L +RR+ ++ ++ FGKW GL ++ MI+WPP++ Sbjct: 347 TMRSRRVKLHRKFAEILEEELRIRRSAQPNVELQSTFGKWNGLSEDTESQQKMIIWPPIL 406
Query: 59 VIQNTQLDHDEEDK 18 VIQNTQL+ D+E K Sbjct: 407 VIQNTQLEQDDEGK 420
>tr|A5ANH9|A5ANH9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043511 PE=4 SV=1 Length = 1849
Score = 162 bits (409), Expect = 1e-38 Identities = 79/138 (57%), Positives = 101/138 (73%) Frame = -3
Query: 431 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 252 SD S +S ETRK++KWF+SFF+ LD L+ E+I E RQWHCPAC GG GAI+WYRGLQPL Sbjct: 520 SDTSQKSHETRKKSKWFKSFFEILDSLTIEEINEPARQWHCPACQGGPGAIDWYRGLQPL 579
Query: 251 LAHAKTHRTKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGKWKGLRNIDATKDVMIVW 72 + HAKT +KR+ LHRE A +L+++L RR + A FGKWKGL ++ KD IVW Sbjct: 580 ITHAKTKGSKRVKLHRELAELLDEEL-YRRGTSVVPAGEAFGKWKGL--YESVKDHEIVW 636
Query: 71 PPMVVIQNTQLDHDEEDK 18 PPMV+I NT+L+ D + K Sbjct: 637 PPMVIIMNTRLEQDADXK 654
>tr|A9PJV9|A9PJV9_POPJC Putative uncharacterized protein OS=Populus jackii PE=2 SV=1 Length = 609
Score = 139 bits (350), Expect = 8e-32 Identities = 65/138 (47%), Positives = 92/138 (66%), Gaps = 1/138 (0%) Frame = -3
Query: 428 DASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPLL 249 DAS S + K++KWF +FFD D L+ E+I R+WHCPAC GG GAI+WYRG+ PL Sbjct: 174 DASENSYDVLKKSKWFNAFFDDFDKLTVEEINSRARKWHCPACKGGPGAIDWYRGIDPLA 233
Query: 248 AHAKTHRTKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGKWKGLRNIDA-TKDVMIVW 72 HAKT +T+R+ LHR F+ +L++++ ++ G + FG+W+GL DA KD I W Sbjct: 234 YHAKTKKTRRVKLHRMFSEILDEEMH-KKGGLVTPVGEAFGRWQGL---DARVKDYEITW 289
Query: 71 PPMVVIQNTQLDHDEEDK 18 PPMV+I NT+ + +E K Sbjct: 290 PPMVLIMNTRYEQEENGK 307
>tr|Q2QWE8|Q2QWE8_ORYSJ Os12g0197700 protein OS=Oryza sativa subsp. japonica GN=Os12g0197700 PE=4 SV=1 Length = 682
Score = 134 bits (336), Expect = 4e-30 Identities = 69/138 (50%), Positives = 90/138 (65%) Frame = -3
Query: 431 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 252 S AS ++ ETRKR+K +S F+ L+ LS EQI E RQWHCPAC G + WY+GLQPL Sbjct: 246 SKASEKNFETRKRHKLLKSIFELLEKLSVEQINEKTRQWHCPACKNVRGGVTWYKGLQPL 305
Query: 251 LAHAKTHRTKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGKWKGLRNIDATKDVMIVW 72 + HA+T +KR+ LHRE A +LE++L S E FG WKGLR D IVW Sbjct: 306 MNHARTKGSKRVKLHRELAALLEEELYRTGISMASSGEF-FGIWKGLRE---NTDRPIVW 361
Query: 71 PPMVVIQNTQLDHDEEDK 18 PP+V+I NT+L+ D++ K Sbjct: 362 PPVVIIMNTRLEQDKDGK 379
>tr|B8BNK4|B8BNK4_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_37773 PE=4 SV=1 Length = 652
Score = 131 bits (330), Expect = 2e-29 Identities = 69/141 (48%), Positives = 92/141 (65%), Gaps = 3/141 (2%) Frame = -3
Query: 431 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 252 S A+ ++ ETRKR+K +S F+ L+ LS EQI E RQWHCPAC G + WY+GLQPL Sbjct: 216 SKAAEKNFETRKRHKLLKSIFELLEKLSVEQINEKTRQWHCPACKNVRGGVTWYKGLQPL 275
Query: 251 LAHAKTHRTKRIGLHREFANVLEDDL---EVRRAGTGSLAETKFGKWKGLRNIDATKDVM 81 + HA+T +KR+ LHRE A +LE++L V A +G FG WKGLR D Sbjct: 276 MNHARTKGSKRVKLHRELAALLEEELYRTGVSMAPSGEF----FGIWKGLRE---NTDRP 328
Query: 80 IVWPPMVVIQNTQLDHDEEDK 18 IVWPP+V+I NT+L+ D++ K Sbjct: 329 IVWPPVVIIMNTRLEQDKDGK 349
>tr|A2Q480|A2Q480_MEDTR Emr1, related OS=Medicago truncatula GN=MtrDRAFT_AC157375g28v1 PE=4 SV=1 Length = 630
Score = 129 bits (324), Expect = 9e-29 Identities = 65/138 (47%), Positives = 87/138 (63%) Frame = -3
Query: 431 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 252 SD +S E K++KWF+ FF+ L+ L+ E+I +WHCPAC G GAI+WY GLQPL Sbjct: 217 SDTGEKSHEGSKKSKWFRKFFNDLNKLTVEEISSPATRWHCPACQDGPGAIDWYHGLQPL 276
Query: 251 LAHAKTHRTKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGKWKGLRNIDATKDVMIVW 72 L H++T + +R LHR F+ LE++ +R A E G W+GL N KD IVW Sbjct: 277 LNHSRTIKVRRARLHRAFSETLEEECSMRGAPLIRGGEAN-GLWEGLDN--KVKDREIVW 333
Query: 71 PPMVVIQNTQLDHDEEDK 18 PPMVVI NT+ + DE +K Sbjct: 334 PPMVVIMNTKYEQDENNK 351
>tr|A3CFS0|A3CFS0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_034142 PE=4 SV=1 Length = 667
Score = 117 bits (294), Expect = 3e-25 Identities = 62/123 (50%), Positives = 78/123 (63%) Frame = -3
Query: 431 SDASVESLETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPL 252 S AS ++ ETRKR+K +S F+ L+ LS EQI E RQWHCPAC G + WY+GLQPL Sbjct: 246 SKASEKNFETRKRHKLLKSIFELLEKLSVEQINEKTRQWHCPACKNVRGGVTWYKGLQPL 305
Query: 251 LAHAKTHRTKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGKWKGLRNIDATKDVMIVW 72 + HA+T +KR+ LHRE A +LE++L S E FG WKGLR D IVW Sbjct: 306 MNHARTKGSKRVKLHRELAALLEEELYRTGISMASSGEF-FGIWKGLRE---NTDRPIVW 361
Query: 71 PPM 63 PP+ Sbjct: 362 PPV 364
>tr|B8LNA2|B8LNA2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 419
Score = 94.0 bits (232), Expect = 4e-18 Identities = 47/121 (38%), Positives = 78/121 (64%) Frame = -3
Query: 407 ETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPLLAHAKTHR 228 E K++K F+ F+++D L+ +++ ++R+W CPAC G A E ++GL+PL+ HAK R Sbjct: 71 EAMKKHKVFKKLFESMDALTFKEV--NNREWTCPACRAG--AAETHKGLKPLIDHAKNAR 126
Query: 227 TKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGKWKGLRNIDATKDVMIVWPPMVVIQN 48 + LHR+ VLE++L+ RR+ G + +GKW L+ + D IVWPP+V+++N Sbjct: 127 QWNVRLHRKLVKVLEEELK-RRSAAGFAVQEVYGKWLSLQ--EGHIDSQIVWPPIVIVEN 183
Query: 47 T 45 T Sbjct: 184 T 184
>tr|A9NW99|A9NW99_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 419
Score = 94.0 bits (232), Expect = 4e-18 Identities = 47/121 (38%), Positives = 78/121 (64%) Frame = -3
Query: 407 ETRKRNKWFQSFFDTLDDLSNEQIMEHDRQWHCPACYGGVGAIEWYRGLQPLLAHAKTHR 228 E K++K F+ F+++D L+ +++ ++R+W CPAC G A E ++GL+PL+ HAK R Sbjct: 71 EAMKKHKVFKKLFESMDALTFKEV--NNREWTCPACRAG--AAETHKGLKPLIDHAKNAR 126
Query: 227 TKRIGLHREFANVLEDDLEVRRAGTGSLAETKFGKWKGLRNIDATKDVMIVWPPMVVIQN 48 + LHR+ VLE++L+ RR+ G + +GKW L+ + D IVWPP+V+++N Sbjct: 127 QWNVRLHRKLVKVLEEELK-RRSAAGFAVQEVYGKWLSLQ--EGHIDSQIVWPPIVIVEN 183
Query: 47 T 45 T Sbjct: 184 T 184
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