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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919818
Clone id YMU001_000129_E05
Library
Length 438
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000129_E05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCCATCTCCATAGCCGCTTC
CTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTGTCAAAGAGCTTCTCTGG
TCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCGCTCGCCATCTCTAATGG
CAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAACAAGAAGTTCGAGACTCT
GTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAGGTGGACTTCATGGTCCG
AAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGCGTGTACCGAGAGCACTT
CCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGGAAGCTGCCCATGTTTGG
CTGCCAAGATGCCGCTGC
■■Homology search results ■■ -
sp_hit_id P05348
Definition sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays
Align length 110
Score (bit) 140.0
E-value 2.0e-33
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919818|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_E05.
         (438 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai...   140   2e-33
sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chai...   139   4e-33
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai...   139   5e-33
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha...   139   5e-33
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha...   139   5e-33
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai...   138   9e-33
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai...   138   9e-33
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai...   137   2e-32
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai...   136   3e-32
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha...   136   4e-32
sp|P29684|RBS_HEVBR Ribulose bisphosphate carboxylase small chai...   135   6e-32
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai...   135   1e-31
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha...   135   1e-31
sp|P26573|RBS8_NICPL Ribulose bisphosphate carboxylase small cha...   134   2e-31
sp|P07689|RBS3_PEA Ribulose bisphosphate carboxylase small chain...   134   2e-31
sp|P00869|RBS2_PEA Ribulose bisphosphate carboxylase small chain...   134   2e-31
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai...   134   2e-31
sp|P19309|RBS3_LEMGI Ribulose bisphosphate carboxylase small cha...   133   3e-31
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha...   133   3e-31
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai...   132   5e-31
sp|O22077|RBS_FAGCR Ribulose bisphosphate carboxylase small chai...   132   5e-31
sp|Q08186|RBS6_MESCR Ribulose bisphosphate carboxylase small cha...   132   6e-31
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai...   132   8e-31
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai...   131   1e-30
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai...   131   1e-30
sp|Q42915|RBS_MANES Ribulose bisphosphate carboxylase small chai...   131   1e-30
sp|Q42823|RBS_GLYTA Ribulose bisphosphate carboxylase small chai...   131   1e-30
sp|P12468|RBS4_SOYBN Ribulose bisphosphate carboxylase small cha...   131   1e-30

>sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1
          Length = 170

 Score =  140 bits (354), Expect = 2e-33
 Identities = 65/110 (59%), Positives = 78/110 (70%), Gaps = 3/110 (2%)
 Frame = +2

Query: 113 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 283
           F GLK+T     A +S   L  +SNG R+  M VW  Y NKKFETLSYLPPLS++ + KQ
Sbjct: 17  FQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ 76

Query: 284 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 433
           VD+++R GW PC+EF K+G VYRE+     YYDGRYW MWKLPMFGC DA
Sbjct: 77  VDYLLRNGWIPCLEFSKVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDA 126


>sp|Q41373|RBS_SACHY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1
          Length = 168

 Score =  139 bits (351), Expect = 4e-33
 Identities = 66/111 (59%), Positives = 78/111 (70%), Gaps = 3/111 (2%)
 Frame = +2

Query: 113 FSGLKATTLF--APKSPNPLA-ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 283
           F GLK+T     A +S   LA +SNG R+  M VW  Y NKKFETLSYLPPL+ EQ+ KQ
Sbjct: 16  FQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQ 75

Query: 284 VDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
           VD+++R  W PC+EF K G VYRE+     YYDGRYW MWKLPMFGC DA+
Sbjct: 76  VDYLLRNNWVPCLEFSKEGFVYRENSTSPCYYDGRYWTMWKLPMFGCTDAS 126


>sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1
          Length = 180

 Score =  139 bits (350), Expect = 5e-33
 Identities = 63/107 (58%), Positives = 76/107 (71%)
 Frame = +2

Query: 116 SGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVDFM 295
           +GLKA              +NGSRVS M VW+PY+N KFETLSYLPPLS + +AKQ+D++
Sbjct: 32  AGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQIDYV 91

Query: 296 VRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
           ++ GW PCIEFD  G+V RE     GYYDGRYW MWKLPMFGC D+A
Sbjct: 92  IKSGWAPCIEFDVQGTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSA 138


>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
          Length = 177

 Score =  139 bits (350), Expect = 5e-33
 Identities = 67/112 (59%), Positives = 80/112 (71%), Gaps = 4/112 (3%)
 Frame = +2

Query: 113 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 280
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 281 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDAS 137


>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
          Length = 177

 Score =  139 bits (350), Expect = 5e-33
 Identities = 67/112 (59%), Positives = 80/112 (71%), Gaps = 4/112 (3%)
 Frame = +2

Query: 113 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 280
           F+GL+++  F    K+ N L+   SNG RVS M VW P   KKFETLSYLPPLS E +AK
Sbjct: 26  FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85

Query: 281 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
           +VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+
Sbjct: 86  EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDAS 137


>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
           SV=1
          Length = 178

 Score =  138 bits (348), Expect = 9e-33
 Identities = 63/109 (57%), Positives = 76/109 (69%)
 Frame = +2

Query: 110 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 289
           S +    T  FA  S  P   SNG RV  M VW P   KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31  SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87

Query: 290 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
           +++R GW PCIEF K+G VYRE+ +  GYYDGRYW MWKLPMFGC D++
Sbjct: 88  YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSS 136


>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
          Length = 187

 Score =  138 bits (348), Expect = 9e-33
 Identities = 64/113 (56%), Positives = 79/113 (69%), Gaps = 5/113 (4%)
 Frame = +2

Query: 110 SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 277
           SF+GLK+   F       L I    SNG RV  MLVW P + KK+ETLSYLP LS EQ+ 
Sbjct: 25  SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84

Query: 278 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 433
           K+++++++KGW PC+EF+ + G VYREH    GYYDGRYW MWKLPMFGC DA
Sbjct: 85  KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDA 137


>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
          Length = 183

 Score =  137 bits (345), Expect = 2e-32
 Identities = 66/112 (58%), Positives = 83/112 (74%), Gaps = 4/112 (3%)
 Frame = +2

Query: 113 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 283
           F+GLK+++ F    KS +  +I SNG RV  M VW P   KKFETLSYLPPLSSE +AK+
Sbjct: 30  FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89

Query: 284 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
           VD+++RK W PC+EF+ + G VYRE+    GYYDGRYW MWKLPMFGC D++
Sbjct: 90  VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSS 141


>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
           chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
          Length = 181

 Score =  136 bits (343), Expect = 3e-32
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 5/117 (4%)
 Frame = +2

Query: 101 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 268
           L+  F+GLK+   F    K+ N  +   SNG RV  M VW P   KK+ETLSYLPPLS E
Sbjct: 22  LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81

Query: 269 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
            ++K++D+++R  W PC+EF+ + G VYREH H  GYYDGRYW MWKLPMFGC D+A
Sbjct: 82  ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSA 138


>sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small chain
           SSU26, chloroplastic OS=Lemna gibba GN=SSU26 PE=3 SV=1
          Length = 177

 Score =  136 bits (342), Expect = 4e-32
 Identities = 66/113 (58%), Positives = 80/113 (70%), Gaps = 5/113 (4%)
 Frame = +2

Query: 113 FSGLKATTLF-----APKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 277
           F+GL+++  F     A K+ + L  SNG +VS M VW P   KKFETLSYLPPLS E +A
Sbjct: 26  FNGLRSSVAFPATRKANKNLSTLP-SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLA 84

Query: 278 KQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
           K+VD+++R  W PCIEF K G VYRE+    GYYDGRYW MWKLPMFGC DA+
Sbjct: 85  KEVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDAS 137
tr_hit_id Q43110
Definition tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata
Align length 111
Score (bit) 218.0
E-value 9.0e-56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919818|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_E05.
         (438 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c...   218   9e-56
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c...   153   5e-36
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c...   150   4e-35
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c...   148   1e-34
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c...   146   6e-34
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c...   141   1e-32
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c...   141   2e-32
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c...   141   2e-32
tr|B4FSJ3|B4FSJ3_MAIZE Putative uncharacterized protein OS=Zea m...   140   2e-32
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c...   139   7e-32
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c...   139   9e-32
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c...   138   1e-31
tr|O24574|O24574_MAIZE Ribulose bisphosphate carboxylase small c...   138   1e-31
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c...   138   1e-31
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c...   138   2e-31
tr|A7Q6D7|A7Q6D7_VITVI Ribulose bisphosphate carboxylase small c...   138   2e-31
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c...   137   2e-31
tr|B6RHQ3|B6RHQ3_9POAL Chloroplast ribulose-1,5-bisphosphate car...   137   2e-31
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|Q9ZWG3|Q9ZWG3_9POAL Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c...   137   3e-31
tr|B6RHQ4|B6RHQ4_9POAL Chloroplast ribulose-1,5-bisphosphate car...   136   5e-31
tr|Q9FEE4|Q9FEE4_WHEAT Ribulose bisphosphate carboxylase small c...   136   6e-31
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c...   136   6e-31

>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
           chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
          Length = 174

 Score =  218 bits (556), Expect = 9e-56
 Identities = 98/111 (88%), Positives = 106/111 (95%)
 Frame = +2

Query: 101 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 280
           LSKSFSGLKA TLFAPK  NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22  LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81

Query: 281 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDA 433
           QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+
Sbjct: 82  QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDS 132


>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87740 PE=3 SV=1
          Length = 179

 Score =  153 bits (386), Expect = 5e-36
 Identities = 72/113 (63%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = +2

Query: 107 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 286
           K FSGLK+TTLFA K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 287 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 436
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSA 139


>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_87752 PE=3 SV=1
          Length = 179

 Score =  150 bits (378), Expect = 4e-35
 Identities = 71/113 (62%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
 Frame = +2

Query: 107 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 286
           K FSGLK+TTL A K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 27  KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86

Query: 287 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 436
           DFM+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D+A
Sbjct: 87  DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSA 139


>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
          Length = 214

 Score =  148 bits (374), Expect = 1e-34
 Identities = 68/113 (60%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = +2

Query: 107 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 286
           K+FSGLK+ TLF+ K+    ++ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 62  KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121

Query: 287 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 436
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 174


>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
           PE=2 SV=1
          Length = 184

 Score =  148 bits (374), Expect = 1e-34
 Identities = 68/113 (60%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
 Frame = +2

Query: 107 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 286
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 32  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91

Query: 287 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 436
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 92  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSS 144


>tr|A9U380|A9U380_PHYPA Ribulose bisphosphate carboxylase small
           chain (Fragment) OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_8310 PE=3 SV=1
          Length = 156

 Score =  148 bits (374), Expect = 1e-34
 Identities = 68/113 (60%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
 Frame = +2

Query: 107 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 286
           K+FSGLK+ TLF  KS    ++ NGSRV  M VW P    KFET SYLPPLS +QIA+QV
Sbjct: 36  KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 95

Query: 287 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 436
           D+M+++   PCIEFD +G+V R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 96  DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSS 148


>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221004 PE=3 SV=1
          Length = 184

 Score =  148 bits (374), Expect = 1e-34
 Identities = 69/113 (61%), Positives = 83/113 (73%), Gaps = 3/113 (2%)
 Frame = +2

Query: 107 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 286
           K+FSGLK  TLF+ K+    A+ NGSRV  M VW P    KFET SYLPPL+ +QIAKQV
Sbjct: 32  KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91

Query: 287 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 436
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 92  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 144


>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_225236 PE=3 SV=1
          Length = 183

 Score =  146 bits (368), Expect = 6e-34
 Identities = 66/113 (58%), Positives = 84/113 (74%), Gaps = 3/113 (2%)
 Frame = +2

Query: 107 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 286
           K+FSGLK+ TLF+ ++    ++ NGSRV  M VW P    KFET SYLPPL+ ++IAKQV
Sbjct: 31  KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90

Query: 287 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAA 436
           D+M+++   PCIEFD +GSV R +F G   SGYYDGRYW MWKLPMFGC D++
Sbjct: 91  DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSS 143


>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_115069 PE=3 SV=1
          Length = 181

 Score =  141 bits (356), Expect = 1e-32
 Identities = 63/110 (57%), Positives = 79/110 (71%)
 Frame = +2

Query: 107 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 286
           K+FSGLK+ T+F+ K+ N  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 287 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
           ++M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD+A
Sbjct: 92  EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSA 141


>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
           chain OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_146969 PE=3 SV=1
          Length = 181

 Score =  141 bits (355), Expect = 2e-32
 Identities = 64/110 (58%), Positives = 79/110 (71%)
 Frame = +2

Query: 107 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 286
           K+FSGLK++TLF+ K+ +  ++ NGSRV  M VW P    KFET SYLPPLS + IAKQV
Sbjct: 32  KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91

Query: 287 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAA 436
           D+M+++   PC+EFD    V R +    GYYDGRYW MWKLPMFGCQD A
Sbjct: 92  DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPA 141