BP919821
Clone id YMU001_000129_E08
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000129_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AACTGGAAGAATTCGCGGCCAGAAAGCCCTCACTAACTTCCCTACAAGCTGCAGCTGCTC
CGTCCTGCAGAATATGCAATTATATGGGGGACAGGCACTATTAGAAAATGAGCCACAAAG
TAACATAGGGTACTTACACGGCGCTGATCACTCACTCATGGGTACACAAACCCACTATCT
CTCACCTCACGACATTCGCGGATCTCCTCAATTTGATTTTGAAGCAGGCGCTTTCTTCAA
TCCAAGCAGCTTCTCTTCCTCAACATCACCTCAGCTGCCATCGCTAGTCACTCTGCAAAA
CCCGGCAAAGCGCTCGCCGCTTGTGGACGAGATTGCAAATTTCACTGCTGCAACAACGCG
TGAGGAGGGCAATGTCGCAGATGACTCTTTTACTGGCTTGCCTGCTCTGATAAGTGCAGA
ATCTTCCTTGCCCTTCACTCTTCTTTCCCGTCCCTCTCCCCAAAAGCCCACTTCATTGAT
ACATTTCTTCACTAAATGAGATAAATTAGGTT
■■Homology search results ■■ -
sp_hit_id Q0BHU5
Definition sp|Q0BHU5|HBOH_BURCM D-(-)-3-hydroxybutyrate oligomer hydrolase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
Align length 52
Score (bit) 31.2
E-value 2.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919821|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_E08.
(492 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0BHU5|HBOH_BURCM D-(-)-3-hydroxybutyrate oligomer hydrolase ... 31 2.7
sp|Q39J35|HBOH_BURS3 D-(-)-3-hydroxybutyrate oligomer hydrolase ... 31 3.5
sp|Q2SYN3|HBOH_BURTA D-(-)-3-hydroxybutyrate oligomer hydrolase ... 30 5.9
sp|P08920|CD2_MOUSE T-cell surface antigen CD2 OS=Mus musculus G... 30 5.9
sp|Q9L1B1|ARLY_STRCO Argininosuccinate lyase OS=Streptomyces coe... 30 5.9
sp|A4JBY8|HBOH_BURVG D-(-)-3-hydroxybutyrate oligomer hydrolase ... 30 7.8

>sp|Q0BHU5|HBOH_BURCM D-(-)-3-hydroxybutyrate oligomer hydrolase
OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
GN=Bamb_0719 PE=3 SV=1
Length = 695

Score = 31.2 bits (69), Expect = 2.7
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3

Query: 267 VTLQNPAKRSPLVDEIANFTAATT-REEGNVADDSFTGLPALISAESSLPFT 419
VT N RS + D + NF+ ATT G VA + + +PA+ + +P T
Sbjct: 454 VTYANAYTRSRVTDNLCNFSFATTSAPTGTVASPAASPMPAIFGVGNGVPPT 505


>sp|Q39J35|HBOH_BURS3 D-(-)-3-hydroxybutyrate oligomer hydrolase
OS=Burkholderia sp. (strain 383) GN=Bcep18194_A3932 PE=3
SV=1
Length = 696

Score = 30.8 bits (68), Expect = 3.5
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Frame = +3

Query: 36 CSVLQNMQLYGGQALLENEPQSNIGYLHGADHSLMGTQTHYLSPHDIRGSPQFDFEAGAX 215
C+ L L G A +++ + LH A YL+ D+ +P +D +A
Sbjct: 403 CATLAAAGLVSG-ADTQSQAADALAQLHAAG---------YLADSDLLQAPMWDSQA--- 449

Query: 216 XXXXXXXXXXXXXXXXLVTLQNPAKRSPLVDEIANFTAATTR-EEGNVADDSFTGLPALI 392
VT N RS + D + NF+ ATT G VA + + +PA+
Sbjct: 450 ------------IPAIAVTYANAYTRSRVTDNLCNFSFATTNPATGAVAAPATSPMPAVF 497

Query: 393 SAESSLPFT 419
+ +P T
Sbjct: 498 GVGNGVPPT 506


>sp|Q2SYN3|HBOH_BURTA D-(-)-3-hydroxybutyrate oligomer hydrolase
OS=Burkholderia thailandensis (strain E264 / ATCC 700388
/ DSM 13276 / CIP 106301) GN=BTH_I1420 PE=3 SV=1
Length = 698

Score = 30.0 bits (66), Expect = 5.9
Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Frame = +3

Query: 108 GYLHGADHSLMGT----QTH---YLSPHDIRGSPQFDFEAGAXXXXXXXXXXXXXXXXXL 266
G + GAD + Q H YL+ D+ +P +D +A
Sbjct: 411 GLVSGADTASQANDALAQLHAAGYLADSDLLQAPMWDSQA---------------IPAIA 455

Query: 267 VTLQNPAKRSPLVDEIANFTAATTRE-EGNVADDSFTGLPALISAESSLPFT 419
VT N RS + D + NF+ ATT G VA + + + +L A + +P T
Sbjct: 456 VTYANAYTRSRVTDNLCNFSFATTNSVTGAVAPPATSPMTSLFGAGNGVPPT 507


>sp|P08920|CD2_MOUSE T-cell surface antigen CD2 OS=Mus musculus
GN=Cd2 PE=1 SV=1
Length = 344

Score = 30.0 bits (66), Expect = 5.9
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 4/34 (11%)
Frame = +3

Query: 24 TSCSCSVLQN----MQLYGGQALLENEPQSNIGY 113
T+ +C+VLQ ++LY G+ LL + PQ N+ Y
Sbjct: 136 TTLTCAVLQGTDFELKLYQGETLLNSLPQKNMSY 169


>sp|Q9L1B1|ARLY_STRCO Argininosuccinate lyase OS=Streptomyces
coelicolor GN=argH PE=3 SV=1
Length = 475

Score = 30.0 bits (66), Expect = 5.9
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = +3

Query: 306 DEIANFTAATTREEGNVADDSFTGLPALISAESSLPFTLLSRPSP 440
DE+ A R E +VAD SFTG A ++L LL R P
Sbjct: 60 DELTRMIAGLDRLEADVADGSFTGTIADEDVHTALERGLLERLGP 104


>sp|A4JBY8|HBOH_BURVG D-(-)-3-hydroxybutyrate oligomer hydrolase
OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
GN=Bcep1808_0779 PE=3 SV=1
Length = 696

Score = 29.6 bits (65), Expect = 7.8
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3

Query: 267 VTLQNPAKRSPLVDEIANFTAATTR-EEGNVADDSFTGLPALISAESSLPFT 419
VT N RS + D + NF+ ATT G VA + + +PA+ + +P T
Sbjct: 455 VTYANAYTRSSVADNLCNFSFATTNAATGAVAAPAASPMPAVFGLGNGVPPT 506


tr_hit_id Q6BJV7
Definition tr|Q6BJV7|Q6BJV7_DEBHA DEHA2F27038p OS=Debaryomyces hansenii
Align length 65
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919821|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_E08.
(492 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6BJV7|Q6BJV7_DEBHA DEHA2F27038p OS=Debaryomyces hansenii GN=... 35 2.4
tr|B4J7K7|B4J7K7_DROGR GH21837 OS=Drosophila grimshawi GN=GH2183... 33 7.1

>tr|Q6BJV7|Q6BJV7_DEBHA DEHA2F27038p OS=Debaryomyces hansenii
GN=DEHA2F27038g PE=4 SV=2
Length = 724

Score = 34.7 bits (78), Expect = 2.4
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +2

Query: 275 AKPGKALAACG--RDCKFHCCNNA*GGQCRR*LFYWLACSDKCRIFLALHSSFPSLSPKA 448
+K ++ AC R+CK C NN G QC+R L+CS + S P + P
Sbjct: 5 SKKNRSSVACNVCRECKLRCNNNNDGSQCQRCDSLKLSCSYTLKKSQIHKKSLPKIRPTL 64

Query: 449 HFIDT 463
DT
Sbjct: 65 RNADT 69


>tr|B4J7K7|B4J7K7_DROGR GH21837 OS=Drosophila grimshawi GN=GH21837
PE=4 SV=1
Length = 1494

Score = 33.1 bits (74), Expect = 7.1
Identities = 14/57 (24%), Positives = 28/57 (49%)
Frame = +3

Query: 21 PTSCSCSVLQNMQLYGGQALLENEPQSNIGYLHGADHSLMGTQTHYLSPHDIRGSPQ 191
P+S C +N +L+ G + +N + N A+ + Q+H++ PH + P+
Sbjct: 863 PSSEDCLACRNFKLFAGSGVYDNSTEFNCTSKCPAELPHVNYQSHFIGPHCVSSPPR 919