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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP919835
Clone id YMU001_000129_F10
Library
Length 534
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000129_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATCTCCTGATGGGCAATTGTATTCATTGCCAAAACAGAGGAATGTAAGAAAGGGCTTGAG
AAATTTGAAGCTCTCTACGTTACAGGCTTTAAAAGCTGGCGGGAAATATTCAGCCTGACA
GTTTTGAAGCGGTTGGAAGCAAGCGATAATTCTCATGGTCAAGACAGCATTCCCAGCAAT
GCCACTTTCATGTTTGAGTGCTCGGAATCGTGTCGTGCTGGCTGCTTGGCACATCATAAC
TACAGAAGGTAATATGCTGGAAAGGATCCCTCCCTTCAATGAAGGTCTGAGCTTGGGAGG
AAACGCAGGTGATGCAAAGGCCAGAACAGCAGAGCTTATTAGCCTTGAAGTCGGGCCAAT
TCCAGCGAGATGGGAGAGCCTGCTAGCTGTTGCGATAAATGTAACACGTGCCGTCCCTCT
TCAGTGAACGGATCTAGAGTAAGGTGCCCACTTTCGAAATGCAGGTGCCCACGACCGCAG
CTTCGAGCGAAAACTCAGATGGGGTTAAGACGTGGGCGGGAGATCTCAGGTATG
■■Homology search results ■■ -
sp_hit_id P34079
Definition sp|P34079|TXPL2_PLETR Toxin PLTX-2 OS=Plectreurys tristis
Align length 27
Score (bit) 33.9
E-value 0.51
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919835|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_F10.
         (534 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34079|TXPL2_PLETR Toxin PLTX-2 OS=Plectreurys tristis PE=1 SV=1    34   0.51 
sp|A0RPR6|TRMD_CAMFF tRNA (guanine-N(1)-)-methyltransferase OS=C...    32   1.9  
sp|Q9GZW5|SCND2_HUMAN SCAN domain-containing protein 2 OS=Homo s...    31   3.3  
sp|Q8P3Z4|SYW_XANCP Tryptophanyl-tRNA synthetase OS=Xanthomonas ...    31   4.3  
sp|Q5VTJ3|KLD7A_HUMAN Kelch domain-containing protein 7A OS=Homo...    31   4.3  
sp|Q5R866|KLD7A_PONAB Kelch domain-containing protein 7A OS=Pong...    30   5.6  
sp|Q86KI1|AP2A2_DICDI AP-2 complex subunit alpha-2 OS=Dictyostel...    30   5.7  
sp|Q9P8V9|LIP8_CANAL Lipase 8 OS=Candida albicans GN=LIP8 PE=3 SV=2    30   7.4  

>sp|P34079|TXPL2_PLETR Toxin PLTX-2 OS=Plectreurys tristis PE=1 SV=1
          Length = 44

 Score = 33.9 bits (76), Expect = 0.51
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = +1

Query: 388 CCDKCNTCRPSSVNGSRVRCPLSKCRC 468
           CCD C TCR  +  G+  RC   K RC
Sbjct: 16  CCDDCYTCRCGTPWGANCRCDYYKARC 42


>sp|A0RPR6|TRMD_CAMFF tRNA (guanine-N(1)-)-methyltransferase
           OS=Campylobacter fetus subsp. fetus (strain 82-40)
           GN=trmD PE=3 SV=1
          Length = 232

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 28/99 (28%), Positives = 41/99 (41%), Gaps = 9/99 (9%)
 Frame = -1

Query: 303 FPPKLRPSLKGGILSSILPSVVMMCQAASTTRFRALKH----ESGIAGNAVLTMRIIACF 136
           FP  ++P     ILS  + S ++     +   F A KH    +  IAG A L M+    F
Sbjct: 9   FPNLIKPYFDDSILSRAIKSSIIKLNFINPRDFSADKHLKVDDYMIAGGAGLLMKAQPVF 68

Query: 135 QPLQNCQAE---YFPPAFKACNVESFKFLKPF--LTFLC 34
             + +  +    Y  PA K       K L  F  +TF+C
Sbjct: 69  DAIDSLDSTHIIYLTPAGKKFTQNDAKRLSKFENITFIC 107


>sp|Q9GZW5|SCND2_HUMAN SCAN domain-containing protein 2 OS=Homo
           sapiens GN=SCAND2 PE=1 SV=2
          Length = 306

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +1

Query: 343 P*SRANSSEMGEPASCCDKCNTC-----RPSSVNGSRVRCPLSKCRCPR 474
           P SRA +SE G  ASC  +  TC      PS+   +  R   S   C R
Sbjct: 158 PASRARASETGSTASCAGRWRTCCAAAAAPSAARSASARTGRSTSSCAR 206


>sp|Q8P3Z4|SYW_XANCP Tryptophanyl-tRNA synthetase OS=Xanthomonas
           campestris pv. campestris GN=trpS PE=3 SV=1
          Length = 431

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +2

Query: 275 FNEGLSLGGNAGDAKARTAELISLEVGPIPARWESLLA 388
           F +  + G +  DAK +  E I LE+ P+ AR+E+L+A
Sbjct: 263 FAQAFADGISWADAKQQLFERIDLEIAPLRARYEALMA 300


>sp|Q5VTJ3|KLD7A_HUMAN Kelch domain-containing protein 7A OS=Homo
           sapiens GN=KLHDC7A PE=1 SV=4
          Length = 763

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
 Frame = +2

Query: 263 RIPP--FNEGLSLGGNAGDAKARTAELISLEVGPIP-----ARWESLLAVAIN 400
           R PP     G + GG AGD K       S + GP P     +R ESLL +A N
Sbjct: 306 RPPPGSLGTGAASGGQAGDTKGAAERAASPQTGPWPSTRGFSRKESLLQIAEN 358


>sp|Q5R866|KLD7A_PONAB Kelch domain-containing protein 7A OS=Pongo
           abelii GN=KLHDC7A PE=2 SV=3
          Length = 763

 Score = 30.4 bits (67), Expect = 5.6
 Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
 Frame = +2

Query: 263 RIPP--FNEGLSLGGNAGDAKARTAELISLEVGPIP-----ARWESLLAVAIN 400
           R PP     G + GG AGD K       S + GP P     +R ESLL +A N
Sbjct: 306 RPPPRSLGTGAASGGQAGDTKGAAERAASPQPGPSPSTRGFSRKESLLQIAEN 358


>sp|Q86KI1|AP2A2_DICDI AP-2 complex subunit alpha-2 OS=Dictyostelium
           discoideum GN=ap2a1-1 PE=3 SV=1
          Length = 989

 Score = 30.4 bits (67), Expect = 5.7
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +1

Query: 97  WREIFSLTVLKRLEASDNSHGQDSIPSNATFMFECSESCRAGCLAHHN 240
           W ++  L  L+   A D+S G   +    T +F  SES +AG + H N
Sbjct: 260 WLQVKLLKFLRYFPAPDDSQGGKVLGEILTAVFAQSESAKAGTVNHKN 307


>sp|Q9P8V9|LIP8_CANAL Lipase 8 OS=Candida albicans GN=LIP8 PE=3 SV=2
          Length = 460

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 22/86 (25%), Positives = 37/86 (43%)
 Frame = -1

Query: 420 RGTARVTFIATASRLSHLAGIGPTSRLISSAVLAFASPAFPPKLRPSLKGGILSSILPSV 241
           R T + + I      + +   G +   ++S   A   P++ P+L  SL G  L   + ++
Sbjct: 171 RATLKSSKITNIKEDAKVVMWGYSGGSLASGWAAALQPSYAPELSSSLLGAALGGFVTNI 230

Query: 240 VMMCQAASTTRFRALKHESGIAGNAV 163
               QAA  T F      +GI  NA+
Sbjct: 231 TATAQAADGTVF------AGIVANAL 250
tr_hit_id A5C8Z8
Definition tr|A5C8Z8|A5C8Z8_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 41
Score (bit) 71.2
E-value 3.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919835|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_F10.
         (534 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5C8Z8|A5C8Z8_VITVI Putative uncharacterized protein OS=Vitis...    71   3e-11
tr|B3H738|B3H738_ARATH Uncharacterized protein At5g50011.1 OS=Ar...    70   9e-11
tr|B3H5U1|B3H5U1_ARATH Uncharacterized protein At5g64341.1 OS=Ar...    61   3e-08
tr|B3H582|B3H582_ARATH Uncharacterized protein At5g09461.1 OS=Ar...    54   4e-06
tr|B8AQM7|B8AQM7_ORYSI Putative uncharacterized protein OS=Oryza...    49   1e-04
tr|A3AIP7|A3AIP7_ORYSJ Putative uncharacterized protein OS=Oryza...    49   1e-04
tr|Q22MA7|Q22MA7_TETTH PX domain containing protein OS=Tetrahyme...    36   1.1  
tr|B3PPS4|B3PPS4_RHIE6 Putative uncharacterized protein OS=Rhizo...    35   3.2  
tr|B4G273|B4G273_MAIZE Putative uncharacterized protein OS=Zea m...    34   4.2  
tr|A6SS99|A6SS99_BOTFB Putative uncharacterized protein OS=Botry...    34   5.5  
tr|Q4K3I8|Q4K3I8_PSEF5 Putative uncharacterized protein OS=Pseud...    33   7.2  
tr|A7IF57|A7IF57_XANP2 Transcriptional regulator, GntR family OS...    33   7.2  
tr|A8YAH4|A8YAH4_MICAE Genome sequencing data, contig C253 OS=Mi...    33   7.2  
tr|Q9FJF0|Q9FJF0_ARATH Similarity to gibberellin-stimulated tran...    33   7.2  
tr|Q8LFM2|Q8LFM2_ARATH Contains similarity to gibberellin-stimul...    33   7.2  
tr|A2SJ55|A2SJ55_METPP Tryptophanyl-tRNA synthetase OS=Methylibi...    33   9.2  
tr|A7EHW5|A7EHW5_SCLS1 Elongation factor 3 OS=Sclerotinia sclero...    33   9.3  

>tr|A5C8Z8|A5C8Z8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039910 PE=4 SV=1
          Length = 402

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 31/41 (75%), Positives = 38/41 (92%)
 Frame = -1

Query: 237 MMCQAASTTRFRALKHESGIAGNAVLTMRIIACFQPLQNCQ 115
           M+CQAAS TRFRALKHE+GIAG+A + +R+IACFQPLQ+CQ
Sbjct: 1   MVCQAASQTRFRALKHENGIAGSATIIVRVIACFQPLQDCQ 41


>tr|B3H738|B3H738_ARATH Uncharacterized protein At5g50011.1
           OS=Arabidopsis thaliana GN=At5g50011 PE=4 SV=1
          Length = 51

 Score = 69.7 bits (169), Expect = 9e-11
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = -1

Query: 237 MMCQAASTTRFRALKHESGIAGNAVLTMRIIACFQPLQNCQAEYFPPAFK 88
           M+CQ+A  TRFR LKHE GI GN V+  R+IACFQPLQ+CQAEYF    K
Sbjct: 1   MVCQSAGQTRFRTLKHEHGITGNIVV--RVIACFQPLQDCQAEYFRQLLK 48


>tr|B3H5U1|B3H5U1_ARATH Uncharacterized protein At5g64341.1
           OS=Arabidopsis thaliana GN=At5g64341 PE=4 SV=1
          Length = 53

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = -1

Query: 237 MMCQAASTTRFRALKHESGIAGNAVLTMRIIACFQPLQNCQAEYF 103
           M+CQ+   TRFR LK+E+G A  + + +R+I C+QP+ NCQAEYF
Sbjct: 1   MVCQSPGKTRFRGLKYETGNANESTIVVRVIECYQPMDNCQAEYF 45


>tr|B3H582|B3H582_ARATH Uncharacterized protein At5g09461.1
           OS=Arabidopsis thaliana GN=At5g09461 PE=4 SV=1
          Length = 54

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
 Frame = -1

Query: 237 MMCQAASTTRFRALKHES-GIAGNAVLTMRIIACFQPLQNCQAEYF 103
           M+ Q+A  TRFR  K+E+ G +    + +R+IACFQP+ NCQAEYF
Sbjct: 1   MVSQSAGQTRFRTFKYENNGDSSRPTIVVRVIACFQPMDNCQAEYF 46


>tr|B8AQM7|B8AQM7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_11883 PE=4 SV=1
          Length = 414

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 25/51 (49%), Positives = 32/51 (62%)
 Frame = -1

Query: 243 VVMMCQAASTTRFRALKHESGIAGNAVLTMRIIACFQPLQNCQAEYFPPAF 91
           V+M+ Q  + TRFR  KHE+GIA      +R+IACFQP Q+CQ   F   F
Sbjct: 54  VLMVWQPVAQTRFRVFKHENGIA------VRVIACFQPSQDCQKILFAGCF 98


>tr|A3AIP7|A3AIP7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_010669 PE=4 SV=1
          Length = 431

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 25/51 (49%), Positives = 32/51 (62%)
 Frame = -1

Query: 243 VVMMCQAASTTRFRALKHESGIAGNAVLTMRIIACFQPLQNCQAEYFPPAF 91
           V+M+ Q  + TRFR  KHE+GIA      +R+IACFQP Q+CQ   F   F
Sbjct: 71  VLMVWQPVAQTRFRVFKHENGIA------VRVIACFQPSQDCQKILFAGCF 115


>tr|Q22MA7|Q22MA7_TETTH PX domain containing protein OS=Tetrahymena
           thermophila SB210 GN=TTHERM_00037120 PE=4 SV=1
          Length = 996

 Score = 36.2 bits (82), Expect = 1.1
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -3

Query: 364 WNWPDFKANKLCCSGLCITCVSSQAQTFIEGRDPFQHITFCSYDVPSSQHDT 209
           W  PDF  NK+    +    VSSQ Q      DPFQ++ F S+D  + Q ++
Sbjct: 404 WQMPDFSDNKVQAQNIQSNQVSSQVQ------DPFQYVGFDSFDKQNPQKES 449


>tr|B3PPS4|B3PPS4_RHIE6 Putative uncharacterized protein
           OS=Rhizobium etli (strain CIAT 652) GN=RHECIAT_CH0002399
           PE=4 SV=1
          Length = 144

 Score = 34.7 bits (78), Expect = 3.2
 Identities = 24/92 (26%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
 Frame = +1

Query: 283 RSELGRKRR*CKGQNSRAY*P*SRANSSEMGEPASCCDKCNTCRPSSVNGSRVRCPL--- 453
           R ++ R+R+  +G     + P    + +   + A CCD  N C P         CP    
Sbjct: 44  RIDIRRRRQRVEGNPEENHRP--HHDEASAAQDAPCCD--NGCHPKDDLRQAQTCPQTGQ 99

Query: 454 -----SKCRCPRPQLRAKTQMGLRRGREISGM 534
                S+ + P PQLR+   +  RR R + G+
Sbjct: 100 QAPHSSRSQSPAPQLRSDAMLSDRRARPLGGV 131


>tr|B4G273|B4G273_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 151

 Score = 34.3 bits (77), Expect = 4.2
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +1

Query: 379 PASCCDKCNTCRPSSVNGSRVRCPLSKCR---CPRPQLRAKTQMGLRRGR 519
           P +CC   +TCR S+   SR R   +KC     PRP+ R + +   RRGR
Sbjct: 20  PPTCC--ASTCRDSARTTSRSRSTRAKCSPSGAPRPRPRRRGRRTRRRGR 67


>tr|A6SS99|A6SS99_BOTFB Putative uncharacterized protein
           OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_15506
           PE=3 SV=1
          Length = 1110

 Score = 33.9 bits (76), Expect = 5.5
 Identities = 32/131 (24%), Positives = 56/131 (42%)
 Frame = -1

Query: 435 RSVH*RGTARVTFIATASRLSHLAGIGPTSRLISSAVLAFASPAFPPKLRPSLKGGILSS 256
           RS++ R TA+     T   + +L      ++L+   V A     F PKL+P +KG +  +
Sbjct: 292 RSLNDRSTAQEVLRQTVVVVENL------TKLVHDPVEA---RTFLPKLQPGIKGVLERA 342

Query: 255 ILPSVVMMCQAASTTRFRALKHESGIAGNAVLTMRIIACFQPLQNCQAEYFPPAFKACNV 76
            LP V  M   A     +A+  ++G   N V  +  +      +  +AE       A N 
Sbjct: 343 SLPEVREMADRAMKVMDKAMSDDAGNVANGVAHVTKVTAADVSKVLEAEIKKAGGLADNS 402

Query: 75  ESFKFLKPFLT 43
           +  K  K +++
Sbjct: 403 DITKLTKSYIS 413