BP919839 [AcEST]

BP919839
Clone id	YMU001_000129_G04
Library	YMU01
Length	520
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000129_G04.
Accession	BP919839
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2148Contig1
Sequence	TTTTTTTTTGGCCCACTAACATGATCATAGTTGCTTTGGCATGATCAATTGCAATTTGCA CATTAAGTAACTTAATGTTATGCAGTATGTTGCTTCCCTTAAGCAACTATGATCAATTGC AATTTGCACATTAAGTAACTTAATGTTATGCAGTATGTTGCTTCCCTTAATAAAACCATA TCGTGCAGGATGTACAAGATTCAAAACTGAGGTACGAGAGAGAGAATCTCTCACACACAC ATCATATGTGGGCAGTAAAACTAGAACTAAGACAGCATTTGCCTCAATCAGTCTCATCCT CTAGACTATACCACTCTTCAACCTCTTCCTCCAACCATTGCTCTCTAAGCTGCCACCGCT GCTCGTAATCTGCAGCCGTCATGTCTAGCACAGAGTCACCCAAAACCACTCTCATCAGCC CATCAAACAATCCCTGGCACTTTGCCATTATGAGTGTGGGCTTTCGGCAAGTCAAACCAC TGAGAGCTCAAATAGAAAGTCCCAACAAGCATGAGTACCT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q1MQY8
Definition	sp\|Q1MQY8\|IF2_LAWIP Translation initiation factor IF-2 OS=Lawsonia intracellularis (strain PHE/MN1-00)
Align length	44
Score (bit)	29.6
E-value	9.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919839\|Adiantum capillus-veneris mRNA, clone: YMU001_000129_G04. (520 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q1MQY8\|IF2_LAWIP Translation initiation factor IF-2 OS=Lawson... 30 9.0 >sp\|Q1MQY8\|IF2_LAWIP Translation initiation factor IF-2 OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=infB PE=3 SV=1 Length = 961 Score = 29.6 bits (65), Expect = 9.0 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +2 Query: 389 HRVTQNHSHQPIKQSLALCHYECGLSASQTTESSNRKSQQA*VP 520 H+ +NHS + + +S + S+SQ TE +NRK + +P Sbjct: 158 HQTKKNHSEKDVLESHDSSNKNIKQSSSQNTEKTNRKPAASAIP 201
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919839\|Adiantum capillus-veneris mRNA, clone: YMU001_000129_G04. (520 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****