BP919850
Clone id YMU001_000129_H05
Library
Length 430
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000129_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGACTAGAAGCGGATGCGATATTGGGGTGCGTCAGATGCACGGGAGAAGCTCTGGAGTCA
GGTTTTAACATTGGAACTTTGTTAGCAAGGTGGATTGTTAGTGGAAACTGGCCATTTTTG
GTGGAATGTTGAAGACAGCAGGGCATAGAAATTGTCAGGAGGGAGATAGGCATTTTTTTG
TAGATGATCTGGATGGTAACAAACATGAAGTTTTCTCTTATCAATGTTGCTGATGAGAAG
GTGTATCCGAGCTTGGATATATTCATGTTTCTATATTGAAGCATGGAACCTAGCAACTCT
TCACTGGATTGGTTTTCAACGATGAGTGCCAGGGCTGTGGAAGTTTTGAAGTCATTGCTG
TTATGGAGTAGGCAATGTGATGGCCATGGCAATACAATCTATAGAATTATAGACTTGTTA
TTTTGTAATG
■■Homology search results ■■ -
sp_hit_id Q9IGY7
Definition sp|Q9IGY7|REP_MSVTA Replication-associated protein OS=Maize streak virus genotype B (isolate Tas)
Align length 45
Score (bit) 30.4
E-value 3.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919850|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_H05.
(430 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9IGY7|REP_MSVTA Replication-associated protein OS=Maize stre... 30 3.1
sp|Q9IGY6|REPA_MSVTA Replication-associated protein A OS=Maize s... 30 3.1
sp|O80891|CSLB4_ARATH Cellulose synthase-like protein B4 OS=Arab... 30 4.1
sp|Q31JS3|RECF_THICR DNA replication and repair protein recF OS=... 30 5.3
sp|P14989|REP_MSVS Replication-associated protein OS=Maize strea... 29 7.0
sp|P14978|REP_MSVN Replication-associated protein OS=Maize strea... 29 7.0
sp|P14988|REP_MSVK Replication-associated protein OS=Maize strea... 29 7.0
sp|P14990|REPA_MSVS Replication-associated protein A OS=Maize st... 29 7.0
sp|P14980|REPA_MSVN Replication-associated protein A OS=Maize st... 29 7.0
sp|P03568|REPA_MSVK Replication-associated protein A OS=Maize st... 29 7.0
sp|Q58798|Y1403_METJA Uncharacterized protein MJ1403 OS=Methanoc... 29 7.1
sp|P03860|YPCD_STAAU Uncharacterized 8.7 kDa protein OS=Staphylo... 29 9.1

>sp|Q9IGY7|REP_MSVTA Replication-associated protein OS=Maize streak
virus genotype B (isolate Tas) GN=C1/C2 PE=3 SV=1
Length = 355

Score = 30.4 bits (67), Expect = 3.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3

Query: 137 CLQHSTKNGQFPLTIHLANKVPMLKPDSRASPVHLTHPNIASASS 3
C Q + K+G L L + P+ DSR + HPNI SA S
Sbjct: 49 CAQEAHKDGDMHLHALLQTEKPVRITDSRFFDIEGFHPNIQSAKS 93


>sp|Q9IGY6|REPA_MSVTA Replication-associated protein A OS=Maize
streak virus genotype B (isolate Tas) GN=C1 PE=3 SV=1
Length = 272

Score = 30.4 bits (67), Expect = 3.1
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -3

Query: 137 CLQHSTKNGQFPLTIHLANKVPMLKPDSRASPVHLTHPNIASASS 3
C Q + K+G L L + P+ DSR + HPNI SA S
Sbjct: 49 CAQEAHKDGDMHLHALLQTEKPVRITDSRFFDIEGFHPNIQSAKS 93


>sp|O80891|CSLB4_ARATH Cellulose synthase-like protein B4
OS=Arabidopsis thaliana GN=CSLB4 PE=2 SV=1
Length = 755

Score = 30.0 bits (66), Expect = 4.1
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 8/99 (8%)
Frame = -3

Query: 383 PSHCLLHNSNDFKTSTALALIVENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRE--- 213
P++CLLHNS F L +I+ L+G Y LG++ S + +
Sbjct: 554 PAYCLLHNSALFPKGVYLGIII------TLVGIHCLYTLWEFMNLGFSIQSWYVTQSFGR 607

Query: 212 -----NFMFVTIQIIYKKMPISLLTISMPCCLQHSTKNG 111
+++F + +I K + IS + TK+G
Sbjct: 608 IKTTCSWLFSVLDVILKLLGISKTVFIVTKKTMPETKSG 646


>sp|Q31JS3|RECF_THICR DNA replication and repair protein recF
OS=Thiomicrospira crunogena (strain XCL-2) GN=recF PE=3
SV=1
Length = 362

Score = 29.6 bits (65), Expect = 5.3
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = -3

Query: 368 LHNSNDFKTSTALALIVENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRENFMFVTIQ 189
L + F+T+ LI +NQS L G++ + ++ L T TL + + T
Sbjct: 47 LASGRSFRTAKPHQLIQQNQSELVLFGTLTEADRIHKIGLARTSDKVTLKIDGELAKTQA 106

Query: 188 IIYKKMPISLLT 153
+ K+P+ LLT
Sbjct: 107 DMSAKLPVQLLT 118


>sp|P14989|REP_MSVS Replication-associated protein OS=Maize streak
virus genotype A (isolate South Africa) GN=C1/C2 PE=3
SV=2
Length = 355

Score = 29.3 bits (64), Expect = 7.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3

Query: 137 CLQHSTKNGQFPLTIHLANKVPMLKPDSRASPVHLTHPNIASASS 3
C + + K+G L L + P+ DSR ++ HPNI SA S
Sbjct: 49 CAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKS 93


>sp|P14978|REP_MSVN Replication-associated protein OS=Maize streak
virus genotype A (isolate Nigeria) GN=C1/C2 PE=3 SV=2
Length = 360

Score = 29.3 bits (64), Expect = 7.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3

Query: 137 CLQHSTKNGQFPLTIHLANKVPMLKPDSRASPVHLTHPNIASASS 3
C + + K+G L L + P+ DSR ++ HPNI SA S
Sbjct: 49 CAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKS 93


>sp|P14988|REP_MSVK Replication-associated protein OS=Maize streak
virus genotype A (isolate Kenya) GN=C1/C2 PE=3 SV=2
Length = 360

Score = 29.3 bits (64), Expect = 7.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3

Query: 137 CLQHSTKNGQFPLTIHLANKVPMLKPDSRASPVHLTHPNIASASS 3
C + + K+G L L + P+ DSR ++ HPNI SA S
Sbjct: 49 CAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKS 93


>sp|P14990|REPA_MSVS Replication-associated protein A OS=Maize
streak virus genotype A (isolate South Africa) GN=C1
PE=1 SV=1
Length = 272

Score = 29.3 bits (64), Expect = 7.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3

Query: 137 CLQHSTKNGQFPLTIHLANKVPMLKPDSRASPVHLTHPNIASASS 3
C + + K+G L L + P+ DSR ++ HPNI SA S
Sbjct: 49 CAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKS 93


>sp|P14980|REPA_MSVN Replication-associated protein A OS=Maize
streak virus genotype A (isolate Nigeria) GN=C1 PE=1
SV=1
Length = 272

Score = 29.3 bits (64), Expect = 7.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3

Query: 137 CLQHSTKNGQFPLTIHLANKVPMLKPDSRASPVHLTHPNIASASS 3
C + + K+G L L + P+ DSR ++ HPNI SA S
Sbjct: 49 CAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKS 93


>sp|P03568|REPA_MSVK Replication-associated protein A OS=Maize
streak virus genotype A (isolate Kenya) GN=C1 PE=3 SV=2
Length = 272

Score = 29.3 bits (64), Expect = 7.0
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3

Query: 137 CLQHSTKNGQFPLTIHLANKVPMLKPDSRASPVHLTHPNIASASS 3
C + + K+G L L + P+ DSR ++ HPNI SA S
Sbjct: 49 CAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKS 93


tr_hit_id B4Q4A1
Definition tr|B4Q4A1|B4Q4A1_DROSI GD23855 OS=Drosophila simulans
Align length 75
Score (bit) 36.2
E-value 0.85
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919850|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_H05.
(430 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4Q4A1|B4Q4A1_DROSI GD23855 OS=Drosophila simulans GN=GD23855... 36 0.85
tr|B4P2J9|B4P2J9_DROYA GE18606 OS=Drosophila yakuba GN=GE18606 P... 34 3.2
tr|Q1Z7H3|Q1Z7H3_PHOPR Outer membrane protein OmpW OS=Photobacte... 33 5.5
tr|B4IED0|B4IED0_DROSE GM10070 OS=Drosophila sechellia GN=GM1007... 33 5.5
tr|Q7RED4|Q7RED4_PLAYO Ion transport protein, putative OS=Plasmo... 33 7.2
tr|A3SAJ6|A3SAJ6_9RHOB Alpha/beta hydrolase OS=Sulfitobacter sp.... 33 9.4
tr|Q9VK52|Q9VK52_DROME ACXB OS=Drosophila melanogaster GN=ACXB P... 33 9.4
tr|Q9NJA1|Q9NJA1_DROME Adenylyl cyclase ACXB OS=Drosophila melan... 33 9.4
tr|B3N3B9|B3N3B9_DROER GG23799 OS=Drosophila erecta GN=GG23799 P... 33 9.4
tr|A3LVE4|A3LVE4_PICST Predicted protein OS=Pichia stipitis GN=P... 33 9.4

>tr|B4Q4A1|B4Q4A1_DROSI GD23855 OS=Drosophila simulans GN=GD23855
PE=4 SV=1
Length = 1095

Score = 36.2 bits (82), Expect = 0.85
Identities = 20/75 (26%), Positives = 39/75 (52%)
Frame = -3

Query: 341 STALALIVENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRENFMFVTIQIIYKKMPIS 162
+T L +++S + ++ Y ++I+ LG + S ++R M ++ +KKMP+
Sbjct: 481 TTYLLTAAPSRNSVRSVDAVHSYAEIDINALGASRKSP-ILRPTLMSDELRKEFKKMPVG 539

Query: 161 LLTISMPCCLQHSTK 117
I PCC HS++
Sbjct: 540 GFNIRSPCCRDHSSE 554


>tr|B4P2J9|B4P2J9_DROYA GE18606 OS=Drosophila yakuba GN=GE18606 PE=4
SV=1
Length = 1120

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = -3

Query: 341 STALALIVENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRENFMFVTIQIIYKKMPIS 162
ST L +++S + ++ Y +NI+ LG + SA ++R M ++ ++KMP+
Sbjct: 482 STYLLTAAPSRNSVRSVETVHSYAEININALGESRKSA-ILRPTLMSNELREEFRKMPVG 540

Query: 161 LLTISMPCC 135
+ PCC
Sbjct: 541 GFRVRSPCC 549


>tr|Q1Z7H3|Q1Z7H3_PHOPR Outer membrane protein OmpW
OS=Photobacterium profundum 3TCK GN=P3TCK_15055 PE=4
SV=1
Length = 212

Score = 33.5 bits (75), Expect = 5.5
Identities = 21/71 (29%), Positives = 38/71 (53%)
Frame = -3

Query: 371 LLHNSNDFKTSTALALIVENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRENFMFVTI 192
L H DF +A +V N+SS+++LG + +++ + ++LG TF +I +N F +
Sbjct: 21 LAHKKGDFLVRAGIASVVPNESSDDVLG-LGEFKIDSNTQLGLTF--GYMITDNISFEVL 77

Query: 191 QIIYKKMPISL 159
K +SL
Sbjct: 78 AATPFKHKVSL 88


>tr|B4IED0|B4IED0_DROSE GM10070 OS=Drosophila sechellia GN=GM10070
PE=4 SV=1
Length = 1117

Score = 33.5 bits (75), Expect = 5.5
Identities = 19/75 (25%), Positives = 39/75 (52%)
Frame = -3

Query: 341 STALALIVENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRENFMFVTIQIIYKKMPIS 162
+T L +++S + ++ Y ++I+ LG + S ++R M ++ +KKMP+
Sbjct: 481 TTYLLTAAPSRNSVRSVDAVHSYAEIDINALGASRKSP-ILRPTLMSDELRKEFKKMPVG 539

Query: 161 LLTISMPCCLQHSTK 117
I PCC +S++
Sbjct: 540 GFNIRSPCCRDNSSE 554


>tr|Q7RED4|Q7RED4_PLAYO Ion transport protein, putative OS=Plasmodium
yoelii yoelii GN=PY05131 PE=4 SV=1
Length = 1265

Score = 33.1 bits (74), Expect = 7.2
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = -3

Query: 374 CLLHNSNDFKTSTALALI---VENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRENFM 204
C+L + S AL I + N + EEL+ SM Y ++I +L Y + ++ +
Sbjct: 1020 CILRFIGTYNISNALIPITVQLSNNTYEELIKSMNVYNYISIEELKYALLAKSINCKGLF 1079

Query: 203 FVTIQIIYKKMPISLL 156
F+ I YK + L
Sbjct: 1080 FLIINFFYKPKAVKSL 1095


>tr|A3SAJ6|A3SAJ6_9RHOB Alpha/beta hydrolase OS=Sulfitobacter sp.
EE-36 GN=EE36_14912 PE=4 SV=1
Length = 320

Score = 32.7 bits (73), Expect = 9.4
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Frame = -3

Query: 179 KKMPISLLTISMPCCLQHSTKNGQFPLTIHLANKVPMLK-------PDSRASPVHLTHPN 21
KKM T++MP L H T + PL +H A P L P P H+T P+
Sbjct: 246 KKMVPKYDTLTMPVELIHGTADTIVPLDVHAAIATPQLPDAVLTTLPGIGHMPQHVTQPD 305

Query: 20 IASA 9
+ +A
Sbjct: 306 VIAA 309


>tr|Q9VK52|Q9VK52_DROME ACXB OS=Drosophila melanogaster GN=ACXB PE=2
SV=3
Length = 1114

Score = 32.7 bits (73), Expect = 9.4
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = -3

Query: 341 STALALIVENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRENFMFVTIQIIYKKMPIS 162
+T L +++S + ++ Y ++I+ LG + S ++R M ++ +KKMP+
Sbjct: 478 TTYLLTAAPSRNSVRSVDAVHSYAEIDINALGASRKSP-ILRPTLMSDELREEFKKMPVG 536

Query: 161 LLTISMPCCLQHS 123
I PCC +S
Sbjct: 537 GFNIRSPCCRDNS 549


>tr|Q9NJA1|Q9NJA1_DROME Adenylyl cyclase ACXB OS=Drosophila
melanogaster GN=ACXB PE=2 SV=1
Length = 1114

Score = 32.7 bits (73), Expect = 9.4
Identities = 19/73 (26%), Positives = 37/73 (50%)
Frame = -3

Query: 341 STALALIVENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRENFMFVTIQIIYKKMPIS 162
+T L +++S + ++ Y ++I+ LG + S ++R M ++ +KKMP+
Sbjct: 478 TTYLLTAAPSRNSVRSVDAVHSYAEIDINALGASRKSP-ILRPTLMSDELREEFKKMPVG 536

Query: 161 LLTISMPCCLQHS 123
I PCC +S
Sbjct: 537 GFNIRSPCCRDNS 549


>tr|B3N3B9|B3N3B9_DROER GG23799 OS=Drosophila erecta GN=GG23799 PE=4
SV=1
Length = 1122

Score = 32.7 bits (73), Expect = 9.4
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = -3

Query: 341 STALALIVENQSSEELLGSMLQYRNMNISKLGYTFSSATLIRENFMFVTIQIIYKKMPIS 162
ST L +++S + ++ Y ++NI LG + S +++ M ++ +KKMP+
Sbjct: 482 STYLLTAAPSRNSVRPVDAVHSYADINIKALGASRKSP-ILKPTVMSDELREEFKKMPVG 540

Query: 161 LLTISMPCC 135
+ I PCC
Sbjct: 541 GVQIRSPCC 549


>tr|A3LVE4|A3LVE4_PICST Predicted protein OS=Pichia stipitis
GN=PICST_36271 PE=4 SV=2
Length = 534

Score = 32.7 bits (73), Expect = 9.4
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = -3

Query: 368 LHNSNDFKTSTALALIVENQSSEELLGSMLQYRNMNISK--LGYTFSSATLIRENFMFVT 195
++ SND K S ++ + + EEL N +SK Y +S A L E F F
Sbjct: 143 INESNDEKGSFKNMVVTDGEIDEELA-------NYYLSKEYFWYLYSGAGLFYEKFGFKA 195

Query: 194 IQIIYKKMPISLLTIS 147
+ + K+P S LT+S
Sbjct: 196 FPLDFYKVPSSSLTVS 211