BP919851
Clone id YMU001_000129_H06
Library
Length 469
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000129_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGACACTCTAAAGCTCCGACTTTCAACTGTGAAAAGCCACATATGAGGTGTAATTTTTG
TGCTTGGGCACACATACAGAATTCTGCAGCCTTCTCTCATAGCTGGCATTGTGGACCTTA
TTGCATATCATGATTTTCCACATTGTACTGCTAAGGCCATTAGTTTGTGAAACGTTCTAT
CGCCAGTGGTGAAGGTACGACCATGAGCCAGAGGATTGAGGTAGCAACGCAGGCCCTTAC
AATACCTACGTAGTCTTGCAATGGGTCTTATAGTTAGAGACTGGCCGTGGTGAGAAAGGC
TTCCCGGGGTCAGATGCTCAGGGTCAGCATCAGGACAAGTTTCAGGATCAGTTTTGTAGT
TGGACCGGCCGTTTTGGTTATGATAAAGGCCATTCTAGAAGATACTGGATAATTGCAGAT
TAAATGGTAGACAGAGTCAAAGACAGAGACAACAGGGAAATTTGACCTT
■■Homology search results ■■ -
sp_hit_id P10070
Definition sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 OS=Homo sapiens
Align length 38
Score (bit) 29.6
E-value 6.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919851|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_H06.
(469 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 OS=Homo sapiens GN... 30 6.9
sp|O34504|YCEB_BACSU Uncharacterized protein yceB OS=Bacillus su... 29 8.9
sp|Q0ACA3|LIPB_ALHEH Octanoyltransferase OS=Alkalilimnicola ehrl... 29 9.1
sp|Q9SAB6|C71AI_ARATH Cytochrome P450 71A18 OS=Arabidopsis thali... 29 9.1

>sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 OS=Homo sapiens
GN=GLI2 PE=1 SV=4
Length = 1586

Score = 29.6 bits (65), Expect = 6.9
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1

Query: 367 RSNYKTDPETCPDADPEHLTPGSLSHHGQSLTIRPIAR 254
RS KT+PE A P LT G +S HG P+++
Sbjct: 374 RSKVKTEPEGLRPASPLALTQGQVSGHGSCGCALPLSQ 411


>sp|O34504|YCEB_BACSU Uncharacterized protein yceB OS=Bacillus
subtilis GN=yceB PE=4 SV=1
Length = 313

Score = 29.3 bits (64), Expect = 8.9
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = -3

Query: 224 LPQSSGSWSYLHHWR*NVSQTNGLSSTMWKIMICNKVHNASYERRLQNSVCVPKHKNY 51
L Q S W Y +W T GL+ST +IMI + R V +P++ +
Sbjct: 10 LAQLSEQWGYKRYWFAEHHSTKGLASTAPEIMIARIAAQTNTIRVGSGGVLLPQYSPF 67


>sp|Q0ACA3|LIPB_ALHEH Octanoyltransferase OS=Alkalilimnicola
ehrlichei (strain MLHE-1) GN=lipB PE=3 SV=1
Length = 215

Score = 29.3 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -1

Query: 376 QNGRSNYKTDPETCPDADPEHLTPGSLSHHGQS-LTIRPIARLRRYCKGLRCYLNPLAH 203
Q GR + DP P + + G +++HG + + P+ LRR+ G+R ++ L H
Sbjct: 54 QAGRREHILDPGEIPVVETDR--GGQVTYHGPGQIVLYPLLDLRRWGLGVRSLVSALEH 110


>sp|Q9SAB6|C71AI_ARATH Cytochrome P450 71A18 OS=Arabidopsis thaliana
GN=CYP71A18 PE=2 SV=2
Length = 497

Score = 29.3 bits (64), Expect = 9.1
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -1

Query: 334 PDAD---PEHLTPGSLSHHGQSLTIRPIARLRRYCKGL 230
PDA+ PE +L +HGQ L P RR C G+
Sbjct: 405 PDAEEFKPERHLDSTLDYHGQDLKYIPFGSGRRICPGI 442


tr_hit_id A9JT23
Definition tr|A9JT23|A9JT23_DANRE Zgc:91936 protein OS=Danio rerio
Align length 73
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919851|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_H06.
(469 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9JT23|A9JT23_DANRE Zgc:91936 protein OS=Danio rerio GN=zgc:9... 33 9.3
tr|Q9CA34|Q9CA34_ARATH Putative uncharacterized protein T26J14.4... 33 9.3
tr|Q8GXF5|Q8GXF5_ARATH Putative uncharacterized protein At1g6847... 33 9.3

>tr|A9JT23|A9JT23_DANRE Zgc:91936 protein OS=Danio rerio
GN=zgc:91936 PE=2 SV=1
Length = 340

Score = 32.7 bits (73), Expect = 9.3
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 9/73 (12%)
Frame = -1

Query: 253 LRRYCKGLRCYLNPLAHGRTFTTGDRTFHKLMALAV-------QCGKS*YAI--RSTMPA 101
+R Y +G +C HG+T + FHK L+V +C S I + +
Sbjct: 19 IRAYVRGAKCKSKVKLHGKTVIVTGKNFHKTRRLSVILSISRWRCAGSNVGIGRATAVDL 78

Query: 100 MREGCRILYVCPS 62
R G R++ C S
Sbjct: 79 ARRGARVILACRS 91


>tr|Q9CA34|Q9CA34_ARATH Putative uncharacterized protein T26J14.4
OS=Arabidopsis thaliana GN=At1g68470 PE=4 SV=1
Length = 455

Score = 32.7 bits (73), Expect = 9.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1

Query: 118 RSTMPAMREGCRILYVCPSTKITPHMWLFTVESRSFRV 5
RST AM GC ++ P T T +MW + RS+ V
Sbjct: 347 RSTFDAMLAGCIPVFFSPHTMYTQYMWYLPDDKRSYSV 384


>tr|Q8GXF5|Q8GXF5_ARATH Putative uncharacterized protein
At1g68470/T26J14_4 OS=Arabidopsis thaliana
GN=At1g68470/T26J14_4 PE=2 SV=1
Length = 455

Score = 32.7 bits (73), Expect = 9.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = -1

Query: 118 RSTMPAMREGCRILYVCPSTKITPHMWLFTVESRSFRV 5
RST AM GC ++ P T T +MW + RS+ V
Sbjct: 347 RSTFDAMLAGCIPVFFSPHTMYTQYMWYLPDDKRSYSV 384