BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919852|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_H07.
         (499 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99PJ1|PCD15_MOUSE Protocadherin-15 OS=Mus musculus GN=Pcdh15...    30   6.1  

>sp|Q99PJ1|PCD15_MOUSE Protocadherin-15 OS=Mus musculus GN=Pcdh15 PE=1
            SV=1
          Length = 1943

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -3

Query: 263  STEKKICVYMEKPQKKSYPNYALSMSFFPYEDKLN 159
            +TE     ++E P K+S PN A + SF P ED L+
Sbjct: 1496 TTESHEPAHVEGPLKESQPNPARTFSFVPDEDNLS 1530

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919852|Adiantum capillus-veneris mRNA, clone:
YMU001_000129_H07.
         (499 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5VQC8|Q5VQC8_ORYSJ Putative uncharacterized protein P0542E10...    33   5.7  
tr|Q9X3Y9|Q9X3Y9_BACSU Replication initiator protein Rep OS=Baci...    33   9.7  
tr|Q45447|Q45447_BACSU Replication protein OS=Bacillus subtilis ...    33   9.7  

>tr|Q5VQC8|Q5VQC8_ORYSJ Putative uncharacterized protein P0542E10.13
           OS=Oryza sativa subsp. japonica GN=P0542E10.13 PE=4 SV=1
          Length = 199

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 19/46 (41%), Positives = 23/46 (50%)
 Frame = +3

Query: 192 RQCIVWITFFLRFFHVHAYFFFSRIKIFSSHFIKPITSPNLISRQP 329
           RQC    +FFL  F +H  FF    K F  H  K  +SP  IS+ P
Sbjct: 113 RQC----SFFLHAFFLHCRFFLRNRKPFRFHLNKTASSPPKISKLP 154


>tr|Q9X3Y9|Q9X3Y9_BACSU Replication initiator protein Rep
           OS=Bacillus subtilis GN=rep PE=4 SV=1
          Length = 340

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 2   KGKRIKSMLRKSPFPGGQSHTKLIYFASKMKKLCVSKNQAAFKQQPHCDQLE 157
           KGK+ ++ L    +   QS T + Y+  K +KLC      +FK+ P   +L+
Sbjct: 24  KGKKRRTNLMAEHYEALQSKTGIPYYGKKAEKLCSCAECLSFKRDPETGKLK 75


>tr|Q45447|Q45447_BACSU Replication protein OS=Bacillus subtilis
           GN=rep PE=4 SV=1
          Length = 339

 Score = 32.7 bits (73), Expect = 9.7
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +2

Query: 2   KGKRIKSMLRKSPFPGGQSHTKLIYFASKMKKLCVSKNQAAFKQQPHCDQLE 157
           KGK+ ++ L    +   QS T + Y+  K +KLC      +FK+ P   +L+
Sbjct: 24  KGKKRRTNLMAEHYEALQSKTGIPYYGKKAEKLCSCAECLSFKRDPETGKLK 75