BP919857 [AcEST]

BP919857
Clone id	YMU001_000130_A03
Library	YMU01
Length	501
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000130_A03.
Accession	BP919857
Tissue type	prothallium
Developmental stage	-
Contig ID	CL3173Contig1
Sequence	GCGAGAGAGAGAGAGAGAGAAGGGAGAAGGAGACGGGGGATATAAGATTACACTTGGTTA CAACTAAAATAATCATTGTCAATTGATTAACATAATTGAGCATATTCTCAAATCTAAAGA GAGGAAGAGAGAGATGAATGGATTACACGACTAAAAAACTTCATAACTGCAAAATGTTTA TGAATCATCTTCCAAAAGATCTCCAGATGAAGCATCATCCAATTCTAAGCCCATGGCTCC TAAATCAATAAAGAGAGAAACGGAATTGTCGTTAAAAGGCCCATGAAGAAATGGAGAACT TCAGCTTGAGAGAATGCGGCCCTCAAGAATGCAGTAAGCTTGAGGAGGGAAAGGAGGTTC AAACTTCTGCTCTGCTGCAGAGCTTTTGGGAGGGAAATTTGAAAGGAAGGAAAGAGAAGC GACTTGCACGATGATGCATTGCCTTCATCATCTTCGAGTTCGTTAAATCCTCCATCTCAT CCTCTTCATCATCGTGACAAT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q6PCS4
Definition	sp\|Q6PCS4\|RHG29_DANRE Rho GTPase-activating protein 29 OS=Danio rerio
Align length	99
Score (bit)	36.2
E-value	0.087
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919857\|Adiantum capillus-veneris mRNA, clone: YMU001_000130_A03. (501 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q6PCS4\|RHG29_DANRE Rho GTPase-activating protein 29 OS=Danio ... 36 0.087 >sp\|Q6PCS4\|RHG29_DANRE Rho GTPase-activating protein 29 OS=Danio rerio GN=arhgap29 PE=2 SV=1 Length = 1337 Score = 36.2 bits (82), Expect = 0.087 Identities = 25/99 (25%), Positives = 40/99 (40%) Frame = +2 Query: 125 KREMNGLHDKTSLQNVYESSSKRSPDEASSNSKPMAPKSIKRETELSLKGPRNGELQ 304 KR N + Q S S DE N +P K +R + S+ ++Q Sbjct: 522 KRSQNSTRSSHGNLSQGSATSMDNHSADEVEGNMQPCKAKIAERRSNSSI-------DMQ 574 Query: 305 LERMRPSRMQA*GGKGGSNFCSAAELLGGKFERKEREA 421 + R + S+ + G GG CS +E GG E + ++ Sbjct: 575 VPRTQGSQRAWSSGSAGGGGMCSDSESAGGSSESRSMDS 613
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B0UYG6
Definition	tr\|B0UYG6\|B0UYG6_DANRE Novel protein (Zgc:63950) OS=Danio rerio
Align length	99
Score (bit)	36.2
E-value	0.88
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP919857\|Adiantum capillus-veneris mRNA, clone: YMU001_000130_A03. (501 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B0UYG6\|B0UYG6_DANRE Novel protein (Zgc:63950) OS=Danio rerio ... 36 0.88 >tr\|B0UYG6\|B0UYG6_DANRE Novel protein (Zgc:63950) OS=Danio rerio GN=CH211-195I6.1 PE=4 SV=1 Length = 1337 Score = 36.2 bits (82), Expect = 0.88 Identities = 25/99 (25%), Positives = 40/99 (40%) Frame = +2 Query: 125 KREMNGLHDKTSLQNVYESSSKRSPDEASSNSKPMAPKSIKRETELSLKGPRNGELQ 304 KR N + Q S S DE N +P K +R + S+ ++Q Sbjct: 522 KRSQNSTRSSHGNLSQGSATSMDNHSADEVEGNMQPCKAKIAERRSNSSI-------DMQ 574 Query: 305 LERMRPSRMQA*GGKGGSNFCSAAELLGGKFERKEREA 421 + R + S+ + G GG CS +E GG E + ++ Sbjct: 575 VPRTQGSQRAWSSGSAGGGGMCSDSESAGGSSESRSMDS 613