BP919882 |
Clone id |
YMU001_000130_C05 |
Library |
YMU01 |
Length |
413 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000130_C05. |
Accession |
BP919882 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AACTGGAAGAATTCGCGGCCGCGAATTGTGATTCCTCTTGGTCACAACATTCAATGGTTT ATAATCGACACACACCTGCCATCTCCCATTCTTTTTAGGAGTGATAACCACTGGGGAAAC CCACTCTGATTCCTTTATGGGGTATATAATACCTGCATCTAGTAATTGATTGATCTTCTG CCAAAGGGGTTCCTTTTGAATTTCACCCAATCTCCTTAGCTTCTGTGCCTTAGGTTTGTA TCCTTCCTTGAGGGCTATTTTGTGCTCAACACCCTTGGCTCCTCTCAAATCTTTATACTC CTTTGCAAATAGGTTTGGAAAATATGCACACAACTGGACATAACTTTCTTTCTCCTTTTT GGTCAAGTCTCCACTTAGCATATGGACCACCTCTTCAGTACCCATGGCATGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O93209 |
Definition |
sp|O93209|POL_FFV Pro-Pol polyprotein OS=Feline foamy virus |
Align length |
109 |
Score (bit) |
53.5 |
E-value |
3.0e-07 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7FAL2 |
Definition |
tr|Q7FAL2|Q7FAL2_ORYSJ OSJNBa0042N22.17 protein (B1248C03.3 protein) OS=Oryza sativa subsp. japonica |
Align length |
118 |
Score (bit) |
86.3 |
E-value |
7.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919882|Adiantum capillus-veneris mRNA, clone: YMU001_000130_C05. (386 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7FAL2|Q7FAL2_ORYSJ OSJNBa0042N22.17 protein (B1248C03.3 prot... 86 7e-16 tr|Q7XP80|Q7XP80_ORYSJ OSJNBa0021F22.20 protein OS=Oryza sativa ... 84 3e-15 tr|Q7X7H5|Q7X7H5_ORYSA OSJNBa0085C10.2 protein OS=Oryza sativa G... 84 3e-15 tr|A5C086|A5C086_VITVI Putative uncharacterized protein OS=Vitis... 84 5e-15 tr|A5C084|A5C084_VITVI Putative uncharacterized protein OS=Vitis... 84 5e-15 tr|A5BJD2|A5BJD2_VITVI Putative uncharacterized protein OS=Vitis... 84 5e-15 tr|A5B854|A5B854_VITVI Putative uncharacterized protein OS=Vitis... 84 5e-15 tr|A5AWD1|A5AWD1_VITVI Putative uncharacterized protein OS=Vitis... 84 5e-15 tr|A5CAG9|A5CAG9_VITVI Putative uncharacterized protein OS=Vitis... 83 6e-15 tr|Q2AA50|Q2AA50_ASPOF Retrotransposon gag protein OS=Asparagus ... 83 8e-15 tr|Q53KC9|Q53KC9_ORYSJ Retrotransposon protein, putative, unclas... 82 1e-14 tr|Q53KA4|Q53KA4_ORYSJ Retrotransposon protein, putative, unclas... 82 1e-14 tr|A5BW26|A5BW26_VITVI Putative uncharacterized protein OS=Vitis... 82 1e-14 tr|A5C265|A5C265_VITVI Putative uncharacterized protein OS=Vitis... 82 1e-14 tr|Q7XSP1|Q7XSP1_ORYSJ OSJNBa0070M12.15 protein OS=Oryza sativa ... 82 2e-14 tr|Q6AT01|Q6AT01_ORYSJ Putative polyprotein OS=Oryza sativa subs... 81 3e-14 tr|Q5W683|Q5W683_ORYSJ Putative uncharacterized protein OSJNBa00... 81 3e-14 tr|Q7X639|Q7X639_ORYSJ OSJNBb0067G11.5 protein OS=Oryza sativa s... 80 4e-14 tr|Q6AVG0|Q6AVG0_ORYSJ Putative retrotransposon gag protein (Ret... 80 4e-14 tr|A5AGJ4|A5AGJ4_VITVI Putative uncharacterized protein OS=Vitis... 80 4e-14 tr|Q75HC5|Q75HC5_ORYSJ Putative reverse transcriptase (Retrotran... 80 5e-14 tr|Q2QQK7|Q2QQK7_ORYSJ Retrotransposon protein, putative, unclas... 80 5e-14 tr|A5C277|A5C277_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|A5BYU9|A5BYU9_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|Q7XN29|Q7XN29_ORYSJ OSJNBa0083I11.15 protein (OSJNBa0021F22.2... 80 7e-14 tr|A5CBG5|A5CBG5_VITVI Putative uncharacterized protein OS=Vitis... 80 7e-14 tr|A5AS08|A5AS08_VITVI Putative uncharacterized protein OS=Vitis... 80 7e-14 tr|A5AH70|A5AH70_VITVI Putative uncharacterized protein OS=Vitis... 80 7e-14 tr|Q2QW64|Q2QW64_ORYSJ Retrotransposon protein, putative, unclas... 79 9e-14 tr|Q01M82|Q01M82_ORYSA H0622G10.2 protein OS=Oryza sativa GN=H06... 79 9e-14
>tr|Q7FAL2|Q7FAL2_ORYSJ OSJNBa0042N22.17 protein (B1248C03.3 protein) OS=Oryza sativa subsp. japonica GN=OSJNBa0042N22.17 PE=4 SV=1 Length = 1436
Score = 86.3 bits (212), Expect = 7e-16 Identities = 45/118 (38%), Positives = 71/118 (60%), Gaps = 2/118 (1%) Frame = -3
Query: 351 LSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKG--VEHKIALKEGYKPKAQKLRRLG 178 +S +L+ + + ++L F + FA EY ++ G VEH++ LK G+KP Q LRR Sbjct: 1071 ISKNLSSEFRTKLIELLKEFRDCFAWEYHEMPGLSRSIVEHRLPLKPGFKPYQQPLRRCK 1130
Query: 177 EIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNGRWQVCVDYKPLNVVTKRN 4 EP+ +I +L DAG I P + +EWVS +V KKNG+ +VC+D++ LN T ++ Sbjct: 1131 ADMLEPVKAEIKRLYDAGFIRPCRYAEWVSSIVPVIKKNGKVRVCIDFRDLNKATPKD 1188
>tr|Q7XP80|Q7XP80_ORYSJ OSJNBa0021F22.20 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0021F22.20 PE=4 SV=2 Length = 861
Score = 84.3 bits (207), Expect = 3e-15 Identities = 44/128 (34%), Positives = 75/128 (58%), Gaps = 2/128 (1%) Frame = -3
Query: 381 AMGTEEVVHMLSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKG--VEHKIALKEGYK 208 A+G + +S +L+ + + ++L F + FA EY ++ G VEH++ +K G + Sbjct: 24 AVGDQPRPTFISKNLSSEFRTKLIELLKEFRDCFAWEYYEMPGLSRSIVEHRLPIKPGVR 83
Query: 207 PKAQKLRRLGEIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNGRWQVCVDYKP 28 P+ Q RR EP+ +I +L DAG I+P + +EWVS +V KKNG+ +VC+D++ Sbjct: 84 PRQQPPRRCKADMLEPVKAEIKRLYDAGFIHPYRYAEWVSSIVPVIKKNGKVRVCIDFRD 143
Query: 27 LNVVTKRN 4 LN T ++ Sbjct: 144 LNKATPKD 151
>tr|Q7X7H5|Q7X7H5_ORYSA OSJNBa0085C10.2 protein OS=Oryza sativa GN=OSJNBa0085C10.2 PE=4 SV=1 Length = 861
Score = 84.3 bits (207), Expect = 3e-15 Identities = 44/128 (34%), Positives = 75/128 (58%), Gaps = 2/128 (1%) Frame = -3
Query: 381 AMGTEEVVHMLSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKG--VEHKIALKEGYK 208 A+G + +S +L+ + + ++L F + FA EY ++ G VEH++ +K G + Sbjct: 24 AVGDQPRPTFISKNLSSEFRTKLIELLKEFRDCFAWEYYEMPGLSRSIVEHRLPIKPGVR 83
Query: 207 PKAQKLRRLGEIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNGRWQVCVDYKP 28 P+ Q RR EP+ +I +L DAG I+P + +EWVS +V KKNG+ +VC+D++ Sbjct: 84 PRQQPPRRCKADMLEPVKAEIKRLYDAGFIHPYRYAEWVSSIVPVIKKNGKVRVCIDFRD 143
Query: 27 LNVVTKRN 4 LN T ++ Sbjct: 144 LNKATPKD 151
>tr|A5C086|A5C086_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036087 PE=4 SV=1 Length = 1418
Score = 83.6 bits (205), Expect = 5e-15 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 20/138 (14%) Frame = -3
Query: 354 MLSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKGV--EHKIALKEGYKPKAQKLRRL 181 ++S LT ++++ +++ + DL+G + H I ++EG KP Q RRL Sbjct: 780 VISSSLTVSQEDNLLRILRKHKKAIGWQISDLKGISPLICTHHIYMEEGAKPTRQPQRRL 839
Query: 180 GEIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNG------------------R 55 +E + ++ +LL AGIIYPI +S WVSP + PKK+G Sbjct: 840 NPHMQEVVRAEVLKLLQAGIIYPISDSAWVSPTQVVPKKSGITVVKGENGDEVSTRLTTG 899
Query: 54 WQVCVDYKPLNVVTKRNH 1 W+VC+DY+ LN VT+++H Sbjct: 900 WRVCIDYRKLNAVTRKDH 917
>tr|A5C084|A5C084_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036085 PE=4 SV=1 Length = 797
Score = 83.6 bits (205), Expect = 5e-15 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 20/138 (14%) Frame = -3
Query: 354 MLSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKGV--EHKIALKEGYKPKAQKLRRL 181 ++S LT ++++ +++ + DL+G + H I ++EG KP Q RRL Sbjct: 354 VISSSLTVSQEDNLLRILRKHKKAIGWQISDLKGISPLICTHHIYMEEGAKPTRQPQRRL 413
Query: 180 GEIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNG------------------R 55 +E + ++ +LL AGIIYPI +S WVSP + PKK+G Sbjct: 414 NPHMQEVVRAEVLKLLQAGIIYPISDSAWVSPTQVVPKKSGITVVKGENGDEVSTRLTTG 473
Query: 54 WQVCVDYKPLNVVTKRNH 1 W+VC+DY+ LN VT+++H Sbjct: 474 WRVCIDYRKLNAVTRKDH 491
>tr|A5BJD2|A5BJD2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020846 PE=4 SV=1 Length = 1791
Score = 83.6 bits (205), Expect = 5e-15 Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 20/143 (13%) Frame = -3
Query: 369 EEVVHMLSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKGV--EHKIALKEGYKPKAQ 196 EE ++S LT++++ +++ DL+G + H I L+E KP Q Sbjct: 843 EEKPVVISATLTEEQEMKXLKVLKENKRAIGWSISDLKGINPLICTHHIYLEENAKPVRQ 902
Query: 195 KLRRLGEIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNG-------------- 58 RRL + ++ + ++ +LLDAGIIYPI +S WVSP + PKK+G Sbjct: 903 PQRRLNPLMQDVVRNEVLKLLDAGIIYPISDSSWVSPTQVVPKKSGITVMKNDEGELIPT 962
Query: 57 ----RWQVCVDYKPLNVVTKRNH 1 W+VC+D++ LN VTK++H Sbjct: 963 RLTTGWRVCIDFRKLNAVTKKDH 985
>tr|A5B854|A5B854_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003321 PE=4 SV=1 Length = 879
Score = 83.6 bits (205), Expect = 5e-15 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 20/138 (14%) Frame = -3
Query: 354 MLSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKGV--EHKIALKEGYKPKAQKLRRL 181 ++S LT ++++ +++ + DL+G + H I ++EG KP Q RRL Sbjct: 59 VISSSLTVSQEDNLLRILRKHKKAIGWQISDLKGISPLICTHHIYMEEGAKPTRQPQRRL 118
Query: 180 GEIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNG------------------R 55 +E + ++ +LL AGIIYPI +S WVSP + PKK+G Sbjct: 119 NPHMQEVVRAEVLKLLQAGIIYPISDSTWVSPTQVVPKKSGITVVKGENGDEVSTRLTTG 178
Query: 54 WQVCVDYKPLNVVTKRNH 1 W+VC+DY+ LN VT+++H Sbjct: 179 WRVCIDYRKLNAVTRKDH 196
>tr|A5AWD1|A5AWD1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028047 PE=4 SV=1 Length = 1817
Score = 83.6 bits (205), Expect = 5e-15 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 20/138 (14%) Frame = -3
Query: 354 MLSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKGV--EHKIALKEGYKPKAQKLRRL 181 ++S LT ++++ +++ + DL+G + H I ++EG KP Q RRL Sbjct: 915 VISSSLTVSQEDNLLRILRKHKKAIGWQISDLKGISPLICTHHIYMEEGAKPTRQPQRRL 974
Query: 180 GEIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNG------------------R 55 +E + ++ +LL AGIIYPI +S WVSP + PKK+G Sbjct: 975 NPHMQEVVRAEVLKLLQAGIIYPISDSTWVSPTQVVPKKSGITVVKGENGDEVSTRLTTG 1034
Query: 54 WQVCVDYKPLNVVTKRNH 1 W+VC+DY+ LN VT+++H Sbjct: 1035 WRVCIDYRKLNAVTRKDH 1052
>tr|A5CAG9|A5CAG9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007652 PE=4 SV=1 Length = 1551
Score = 83.2 bits (204), Expect = 6e-15 Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 20/143 (13%) Frame = -3
Query: 369 EEVVHMLSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKGV--EHKIALKEGYKPKAQ 196 E+ ++S LT++++ +++ DL+G + H I L+E KP Q Sbjct: 653 EZKPVVISATLTEEQEMKLLKVLKENKRAIGWSISDLKGINPLICTHHIYLEENAKPVRQ 712
Query: 195 KLRRLGEIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNG-------------- 58 RRL + ++ + ++ +LLDAGIIYPI +S WVSP + PKK+G Sbjct: 713 PQRRLNPLMQDVVRNEVLKLLDAGIIYPISDSSWVSPTQVVPKKSGITVMKNDEGEFIST 772
Query: 57 ----RWQVCVDYKPLNVVTKRNH 1 W+VC+D++ LN VTK++H Sbjct: 773 RLTTGWRVCIDFRKLNAVTKKDH 795
>tr|Q2AA50|Q2AA50_ASPOF Retrotransposon gag protein OS=Asparagus officinalis GN=19.t00014 PE=4 SV=1 Length = 1788
Score = 82.8 bits (203), Expect = 8e-15 Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 20/143 (13%) Frame = -3
Query: 369 EEVVHMLSGDLTKKEKESYVQLCAYFPNLFAKEYKDLRGAKG--VEHKIALKEGYKPKAQ 196 E + ++S +LT +KE+ + + D++G V+H+I L + KP Sbjct: 777 ESLPVIISSELTTGQKEALLAVLRENREAIGWTMADIKGISPTIVQHRIHLIDDAKPTRD 836
Query: 195 KLRRLGEIQKEPLWQKINQLLDAGIIYPIKESEWVSPVVITPKKNG-------------- 58 RRL + KE + + I + LD GIIYPI +S WVSPV + PKK+G Sbjct: 837 AQRRLNPVMKEAVRKDILKCLDHGIIYPISDSSWVSPVQVVPKKSGITVIQNEANELIPT 896
Query: 57 ----RWQVCVDYKPLNVVTKRNH 1 W+VC+DY+ LN+ T+++H Sbjct: 897 RIQTGWRVCIDYRKLNLATRKDH 919
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