BP919884 |
Clone id |
YMU001_000130_C07 |
Library |
YMU01 |
Length |
433 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000130_C07. |
Accession |
BP919884 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2608Contig1 |
Sequence |
CACTGACGGTCAATTTTGGGGTCAAGGCATTGGCTAGCCGCAGGGTTGCCCTCATACAGG GGGGCCCTGGGCCTAGCAGCGTACGGCCGCGGATGGTACCTCGCAGATGCTACTCAGCAC GGGGTGGGTGCCCCTTCAAGCGGTCCTGCAGAAGTCCCCACCTTCACACAGATCCAGCAA TCTGTTGCAGCCCACAATGCCTCCTGCGCTCATGACAGCGTCACGCGGTCCGCCTACTGC TTCTGGAGGTCCACTGCCTCTCCTAACCAAACTGTATGGGTGGGCTTCGACGACCCCTTC ACCATCTCCGCCAAGGTGCGCTACCTCAAAAGCATGCATCTCAGGGGCTACGCTTTCTGG AGCATCGGTGGAGATACAAACGGCCTCCTCTTCAAGCAAGCTTTCAAGACCTTGTAAGTT GAAGGGCTTTCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5RBP6 |
Definition |
sp|Q5RBP6|CH3L1_PONAB Chitinase-3-like protein 1 OS=Pongo abelii |
Align length |
89 |
Score (bit) |
44.3 |
E-value |
0.0002 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QRZ5 |
Definition |
tr|A7QRZ5|A7QRZ5_VITVI Chromosome undetermined scaffold_155, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
131 |
Score (bit) |
68.2 |
E-value |
2.0e-10 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919884|Adiantum capillus-veneris mRNA, clone: YMU001_000130_C07. (433 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QRZ5|A7QRZ5_VITVI Chromosome undetermined scaffold_155, who... 68 2e-10 tr|A5AWM9|A5AWM9_VITVI Putative uncharacterized protein (Fragmen... 68 3e-10 tr|O81863|O81863_ARATH Putative chitinase OS=Arabidopsis thalian... 67 4e-10 tr|O81862|O81862_ARATH Putative chitinase (At4g19810) OS=Arabido... 67 6e-10 tr|Q0WT03|Q0WT03_ARATH Putative chitinase OS=Arabidopsis thalian... 66 8e-10 tr|Q84N00|Q84N00_MEDTR Putative class 5 chitinase OS=Medicago tr... 64 4e-09 tr|Q4W6L6|Q4W6L6_CYCRE Chitinase A OS=Cycas revoluta GN=crchiA P... 62 1e-08 tr|O81858|O81858_ARATH Putative uncharacterized protein T16H5.13... 62 1e-08 tr|A7R1N8|A7R1N8_VITVI Chromosome undetermined scaffold_366, who... 62 1e-08 tr|Q5FYY6|Q5FYY6_TRICA Chitinase 6 OS=Tribolium castaneum GN=Chi... 62 2e-08 tr|O81861|O81861_ARATH Chitinase-like protein OS=Arabidopsis tha... 61 3e-08 tr|A7R1P5|A7R1P5_VITVI Chromosome undetermined scaffold_366, who... 60 4e-08 tr|Q43576|Q43576_TOBAC Chitinase, class V OS=Nicotiana tabacum G... 60 5e-08 tr|A9T029|A9T029_PHYPA Predicted protein OS=Physcomitrella paten... 60 5e-08 tr|A5AWN0|A5AWN0_VITVI Putative uncharacterized protein OS=Vitis... 60 5e-08 tr|O81856|O81856_ARATH Chitinase-like protein OS=Arabidopsis tha... 58 3e-07 tr|A7QRZ6|A7QRZ6_VITVI Chromosome undetermined scaffold_155, who... 58 3e-07 tr|A7QRZ3|A7QRZ3_VITVI Chromosome undetermined scaffold_155, who... 56 8e-07 tr|O81857|O81857_ARATH Chitinase-like protein OS=Arabidopsis tha... 56 1e-06 tr|Q7DM11|Q7DM11_TOBAC Chitinase, class V (Fragment) OS=Nicotian... 54 4e-06 tr|Q43591|Q43591_TOBAC Chitinase/lysozyme OS=Nicotiana tabacum P... 54 4e-06 tr|B0VZ34|B0VZ34_CULQU Chitinase A1 OS=Culex quinquefasciatus GN... 54 4e-06 tr|Q7Q977|Q7Q977_ANOGA AGAP004876-PA (Fragment) OS=Anopheles gam... 52 1e-05 tr|A7QRZ0|A7QRZ0_VITVI Chromosome undetermined scaffold_155, who... 52 1e-05 tr|O81853|O81853_ARATH Putative uncharacterized protein T16H5.80... 51 3e-05 tr|B7SA65|B7SA65_HORSE Chitotriosidase OS=Equus caballus PE=4 SV=1 50 4e-05 tr|Q0IG64|Q0IG64_AEDAE Brain chitinase and chia OS=Aedes aegypti... 50 4e-05 tr|B7S833|B7S833_HORSE Chitotriosidase OS=Equus caballus PE=2 SV=1 50 6e-05 tr|P94289|P94289_BACCI Chitinase C OS=Bacillus circulans PE=3 SV=1 50 7e-05 tr|A1YZD2|A1YZD2_ROBPS Chitinase-related agglutinin (Fragment) O... 50 7e-05
>tr|A7QRZ5|A7QRZ5_VITVI Chromosome undetermined scaffold_155, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00005606001 PE=3 SV=1 Length = 378
Score = 68.2 bits (165), Expect = 2e-10 Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 4/131 (3%) Frame = +1
Query: 19 GSRHWLAAGLPSXXXXXXXXXXXXXXXXXDATQHGVGAPSS--GPAE--VPTFTQIQQSV 186 G + W+ AG+P D TQHG+GAP+ GP + V +F+Q++ Sbjct: 243 GVKSWIKAGVPRSKLVMGLPLYGRTWKLKDPTQHGIGAPAVDVGPGDEGVLSFSQVEAFN 302
Query: 187 AAHNASCAHDSVTRSAYCFWRSTASPNQTVWVGFDDPFTISAKVRYLKSMHLRGYAFWSI 366 + A+ +D+ T S Y + T W+G+DD + + K+ + +++ LRGY FW++ Sbjct: 303 KENKATVVYDARTVSTYSY-------AGTSWIGYDDTRSTTVKIGFARALGLRGYFFWAV 355
Query: 367 GGDTNGLLFKQ 399 D+ + +Q Sbjct: 356 NDDSKWKISRQ 366
>tr|A5AWM9|A5AWM9_VITVI Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VITISV_036052 PE=3 SV=1 Length = 373
Score = 67.8 bits (164), Expect = 3e-10 Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 4/131 (3%) Frame = +1
Query: 19 GSRHWLAAGLPSXXXXXXXXXXXXXXXXXDATQHGVGAPSS--GPAE--VPTFTQIQQSV 186 G + W+ AG+P D TQHG+GAP+ GP + V +F+Q++ Sbjct: 243 GVKSWIKAGVPRSKLVMGLPLYGRTWKLKDPTQHGIGAPAVDVGPGDEGVLSFSQVEAFN 302
Query: 187 AAHNASCAHDSVTRSAYCFWRSTASPNQTVWVGFDDPFTISAKVRYLKSMHLRGYAFWSI 366 + A+ +D+ T S Y + T W+G+DD + + K+ + +++ LRGY FW++ Sbjct: 303 KENXATVVYDARTVSTYSY-------AGTSWIGYDDTRSTTVKIGFARALGLRGYFFWAV 355
Query: 367 GGDTNGLLFKQ 399 D+ + +Q Sbjct: 356 NDDSKWKISRQ 366
>tr|O81863|O81863_ARATH Putative chitinase OS=Arabidopsis thaliana GN=T16H5.180 PE=2 SV=1 Length = 366
Score = 67.0 bits (162), Expect = 4e-10 Identities = 42/128 (32%), Positives = 57/128 (44%), Gaps = 4/128 (3%) Frame = +1
Query: 19 GSRHWLAAGLPSXXXXXXXXXXXXXXXXXDATQHGVGAPSSGPAEVPT----FTQIQQSV 186 G R W AGLP+ DA H A SSGPA P + QI++ + Sbjct: 236 GVRAWTQAGLPAKKAVLGFPLYGYAWCLTDAKNHNYYANSSGPAISPDGSIGYDQIRRFI 295
Query: 187 AAHNASCAHDSVTRSAYCFWRSTASPNQTVWVGFDDPFTISAKVRYLKSMHLRGYAFWSI 366 + A+ ++S YC+ + T W+G+DD +I KV+Y K L GY W I Sbjct: 296 VDNKATMVYNSNLVQNYCYAKKT-------WIGYDDNQSIVMKVKYAKQRGLLGYFSWHI 348
Query: 367 GGDTNGLL 390 G D N L Sbjct: 349 GADDNSRL 356
>tr|O81862|O81862_ARATH Putative chitinase (At4g19810) OS=Arabidopsis thaliana GN=T16H5.170 PE=2 SV=1 Length = 379
Score = 66.6 bits (161), Expect = 6e-10 Identities = 40/132 (30%), Positives = 60/132 (45%), Gaps = 4/132 (3%) Frame = +1
Query: 19 GSRHWLAAGLPSXXXXXXXXXXXXXXXXXDATQHGVGAPSSGPAEVPT----FTQIQQSV 186 G+R W+ AGLP+ +A H AP++G A P + QI++ + Sbjct: 238 GTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFI 297
Query: 187 AAHNASCAHDSVTRSAYCFWRSTASPNQTVWVGFDDPFTISAKVRYLKSMHLRGYAFWSI 366 + A+ ++S YC+ T W+G+DD +I KVRY K L GY W + Sbjct: 298 VDNGATTVYNSTVVGDYCY-------AGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHV 350
Query: 367 GGDTNGLLFKQA 402 G D N L + A Sbjct: 351 GADDNSGLSRAA 362
>tr|Q0WT03|Q0WT03_ARATH Putative chitinase OS=Arabidopsis thaliana GN=At4g19810 PE=2 SV=1 Length = 337
Score = 66.2 bits (160), Expect = 8e-10 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 4/132 (3%) Frame = +1
Query: 19 GSRHWLAAGLPSXXXXXXXXXXXXXXXXXDATQHGVGAPSSGPAEVPT----FTQIQQSV 186 G+R W+ AGLP+ +A H AP++G A P + QI++ + Sbjct: 196 GTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISPDGSIGYGQIRKFI 255
Query: 187 AAHNASCAHDSVTRSAYCFWRSTASPNQTVWVGFDDPFTISAKVRYLKSMHLRGYAFWSI 366 + A+ + S YC+ T W+G+DD +I KVRY K L GY W + Sbjct: 256 VDNGATTVYSSTVVGDYCY-------AGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHV 308
Query: 367 GGDTNGLLFKQA 402 G D N L + A Sbjct: 309 GADDNSGLSRAA 320
>tr|Q84N00|Q84N00_MEDTR Putative class 5 chitinase OS=Medicago truncatula GN=chit5 PE=3 SV=1 Length = 383
Score = 63.9 bits (154), Expect = 4e-09 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 4/96 (4%) Frame = +1
Query: 106 DATQHGVGAPSSGPAEVP----TFTQIQQSVAAHNASCAHDSVTRSAYCFWRSTASPNQT 273 D HG+GAP+ GP + Q+ A +D T S Y + ST Sbjct: 281 DPNVHGIGAPNVGPGPGVDGGMAYFQVVDFNKQMGAKVVYDKETGSVYSYSGST------ 334
Query: 274 VWVGFDDPFTISAKVRYLKSMHLRGYAFWSIGGDTN 381 W+G+DDPFT+S KV + +++ L GY FW+ G DT+ Sbjct: 335 -WIGYDDPFTVSVKVGFAQALKLGGYFFWAAGYDTS 369
>tr|Q4W6L6|Q4W6L6_CYCRE Chitinase A OS=Cycas revoluta GN=crchiA PE=2 SV=1 Length = 387
Score = 62.4 bits (150), Expect = 1e-08 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 3/135 (2%) Frame = +1
Query: 16 LGSRHWLAAGLPSXXXXXXXXXXXXXXXXXDATQHGVGAPSSGPAEVP---TFTQIQQSV 186 +G +LAAG+P + + G+GAP+ G V +F++IQ + Sbjct: 241 VGIESFLAAGMPPEKLVLGIPLFGRSWLLKNNNEVGIGAPAVGAGPVDGALSFSEIQNFI 300
Query: 187 AAHNASCAHDSVTRSAYCFWRSTASPNQTVWVGFDDPFTISAKVRYLKSMHLRGYAFWSI 366 A D+ T SAY + VWVG+D+ +++ KV+Y K L GY FWS+ Sbjct: 301 RG-GAREVFDTTTVSAYAY-------KDNVWVGYDNQQSVALKVQYAKEKRLGGYFFWSV 352
Query: 367 GGDTNGLLFKQAFKT 411 D + +L K A T Sbjct: 353 NQDIDAILPKIASDT 367
>tr|O81858|O81858_ARATH Putative uncharacterized protein T16H5.130 (Putative uncharacterized protein AT4g19770) OS=Arabidopsis thaliana GN=T16H5.130 PE=2 SV=1 Length = 248
Score = 62.4 bits (150), Expect = 1e-08 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 5/137 (3%) Frame = +1
Query: 19 GSRHWLAAGLPSXXXXXXXXXXXXXXXXXDATQHGVGAPSSGPA-----EVPTFTQIQQS 183 G + W+ AGLP+ D HG ++GPA E+ +++Q++ Sbjct: 118 GVKDWIDAGLPAEKAVLGFPYYGWAWTLADPKNHGYYVDTTGPAISDDGEI-SYSQLKTW 176
Query: 184 VAAHNASCAHDSVTRSAYCFWRSTASPNQTVWVGFDDPFTISAKVRYLKSMHLRGYAFWS 363 + + A+ HD++ YC+ +T W+G+D +I KV Y K L GY W Sbjct: 177 IVDNKATTVHDNIVIGDYCYAGTT-------WIGYDSEESIVTKVIYAKQKGLLGYFSWQ 229
Query: 364 IGGDTNGLLFKQAFKTL 414 +GGD L TL Sbjct: 230 VGGDDKSELSSAGKTTL 246
>tr|A7R1N8|A7R1N8_VITVI Chromosome undetermined scaffold_366, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00012296001 PE=3 SV=1 Length = 313
Score = 62.0 bits (149), Expect = 1e-08 Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 4/124 (3%) Frame = +1
Query: 31 WLAAGLPSXXXXXXXXXXXXXXXXXDATQHGVGAPSSGPAE----VPTFTQIQQSVAAHN 198 W+ AGLP +A HG+ AP++G V + QI+Q +A + Sbjct: 193 WIQAGLPPKKLVLGFPFYGYAWRLVNADNHGLFAPTNGEGTGSDGVMLYKQIKQFMAQNG 252
Query: 199 ASCAHDSVTRSAYCFWRSTASPNQTVWVGFDDPFTISAKVRYLKSMHLRGYAFWSIGGDT 378 A+ ++ YC+ +T W+G+DD +IS KV Y K L GY W + D Sbjct: 253 AATVFNASIVGGYCYAGTT-------WIGYDDTQSISTKVSYAKGKGLLGYFAWHVAADD 305
Query: 379 NGLL 390 N +L Sbjct: 306 NWVL 309
>tr|Q5FYY6|Q5FYY6_TRICA Chitinase 6 OS=Tribolium castaneum GN=Chi-6 PE=2 SV=1 Length = 377
Score = 61.6 bits (148), Expect = 2e-08 Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 4/120 (3%) Frame = +1
Query: 28 HWLAAGLPSXXXXXXXXXXXXXXXXXDATQHGVGAPSSGPAEVPTFTQIQQSVAAHNASC 207 HW+ +G DA+QH +G+PSSGPA FT+ +N C Sbjct: 239 HWILSGADPQKLAIGIAFYGHAFTLVDASQHDLGSPSSGPAPPGDFTE-NMGTLGYNELC 297
Query: 208 AHDSVTRSAYCFWRSTASP----NQTVWVGFDDPFTISAKVRYLKSMHLRGYAFWSIGGD 375 ++ W T + T+WVGFD+P +++ K +Y K +L G WSI D Sbjct: 298 EFH---KNGIIEWDDTQKVPYLYDDTLWVGFDNPKSVALKAQYAKDNNLAGVMIWSIETD 354
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