BP919887 |
Clone id |
YMU001_000130_C10 |
Library |
YMU01 |
Length |
511 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000130_C10. |
Accession |
BP919887 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TCTTCACTGCTCATCTATACGCAGCTCTCTTCCCAACAGCAAATCATATGTGTCACATTG AGTTTCCTTATTCAGTGAAAAGAGTTCACGAAGCTCCTCCCTGCTGAAATATCTACCACC ACTGCTCTTGTTTTTGCATTCAACGTTGTCTTCCACAGTTGAAGCAATTTCCCCTTTAAC CATCTGCCTTTGGTAAATTTTTTCCTCAATGCTGCCCGTGGCAAAGAGTCTGTAAATGAT CACTGCCTTTCTTTGCCCTTCTCTCCATATGCGTGCCATGGCCTGCGCATCAGTAGCAGG ATTCCAATCTGGATCAAAAAGTATCAAGCGGTTTGCTCCCACTAGATTTAGACCCATGCC ACCTGCTTTTGAAGAAAGCAGAAATACTCTTTCCCCTCCAAAACCAGAGTTGAAACGATC AACCAATTTTTGCCTGTCTGCAACGAGTGTCGCTCCATCCAGGCGCAACCATTTCCAGCC CTTCCACTCACACAAACCCTGAACAAAGTTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9DG67 |
Definition |
sp|Q9DG67|RA54B_CHICK DNA repair and recombination protein RAD54B OS=Gallus gallus |
Align length |
152 |
Score (bit) |
169.0 |
E-value |
6.0e-42 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TE42 |
Definition |
tr|A9TE42|A9TE42_PHYPA SNF2 family DNA-dependent ATPase OS=Physcomitrella patens subsp. patens |
Align length |
154 |
Score (bit) |
211.0 |
E-value |
2.0e-53 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919887|Adiantum capillus-veneris mRNA, clone: YMU001_000130_C10. (495 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TE42|A9TE42_PHYPA SNF2 family DNA-dependent ATPase OS=Physc... 211 2e-53 tr|A2QSF7|A2QSF7_ASPNC Contig An08c0280, complete genome OS=Aspe... 177 2e-43 tr|Q4PCT0|Q4PCT0_USTMA Putative uncharacterized protein OS=Ustil... 176 4e-43 tr|A1CUC9|A1CUC9_ASPCL SNF2 family N-terminal domain protein OS=... 176 5e-43 tr|Q2ULH2|Q2ULH2_ASPOR DNA repair protein OS=Aspergillus oryzae ... 176 7e-43 tr|Q0CSL2|Q0CSL2_ASPTN DNA repair and recombination protein RAD5... 176 7e-43 tr|B8N214|B8N214_ASPFL DsDNA-dependent ATPase Rad54, putative OS... 176 7e-43 tr|Q4WLN4|Q4WLN4_ASPFU DsDNA-dependent ATPase Rad54, putative OS... 175 9e-43 tr|B0XM07|B0XM07_ASPFC DsDNA-dependent ATPase Rad54, putative OS... 175 9e-43 tr|A1DP12|A1DP12_NEOFI SNF2 family N-terminal domain protein OS=... 175 9e-43 tr|Q5TS22|Q5TS22_ANOGA AGAP008748-PA (Fragment) OS=Anopheles gam... 175 1e-42 tr|Q1E6T9|Q1E6T9_COCIM Putative uncharacterized protein OS=Cocci... 172 6e-42 tr|Q4DV35|Q4DV35_TRYCR DNA repair and recombination protein RAD5... 172 8e-42 tr|Q4DJ67|Q4DJ67_TRYCR DNA repair and recombination protein RAD5... 172 8e-42 tr|A7F3P8|A7F3P8_SCLS1 Putative uncharacterized protein OS=Scler... 172 8e-42 tr|Q4QAQ7|Q4QAQ7_LEIMA DNA repair and recombination protein RAD5... 172 1e-41 tr|B6P6S0|B6P6S0_BRAFL Putative uncharacterized protein OS=Branc... 172 1e-41 tr|A4I0R4|A4I0R4_LEIIN DNA repair and recombination protein RAD5... 171 1e-41 tr|Q874V0|Q874V0_PODAN Predicted CDS Pa_5_6320 OS=Podospora anse... 171 1e-41 tr|A4HDD3|A4HDD3_LEIBR DNA repair and recombination protein RAD5... 171 2e-41 tr|A7TIX6|A7TIX6_VANPO Putative uncharacterized protein OS=Vande... 171 2e-41 tr|B6NDE8|B6NDE8_BRAFL Putative uncharacterized protein OS=Branc... 171 2e-41 tr|A6R6K4|A6R6K4_AJECN DNA repair and recombination protein RAD5... 171 2e-41 tr|Q8NK74|Q8NK74_MAGGR Recombinational repair protein OS=Magnapo... 170 3e-41 tr|B8MCZ8|B8MCZ8_9EURO DsDNA-dependent ATPase Rad54, putative OS... 170 3e-41 tr|A4QRL4|A4QRL4_MAGGR Putative uncharacterized protein OS=Magna... 170 3e-41 tr|Q5B1Q3|Q5B1Q3_EMENI Putative uncharacterized protein OS=Emeri... 170 4e-41 tr|B6QE02|B6QE02_PENMA DsDNA-dependent ATPase Rad54, putative OS... 170 4e-41 tr|B6HPC2|B6HPC2_PENCH Pc22g01920 protein OS=Penicillium chrysog... 170 4e-41 tr|A5E1R6|A5E1R6_LODEL DNA repair and recombination protein RAD5... 170 4e-41
>tr|A9TE42|A9TE42_PHYPA SNF2 family DNA-dependent ATPase OS=Physcomitrella patens subsp. patens GN=CHR1543 PE=4 SV=1 Length = 1122
Score = 211 bits (536), Expect = 2e-53 Identities = 101/154 (65%), Positives = 125/154 (81%), Gaps = 1/154 (0%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 +C +GW WLRLDG+T + RQ LVD+ NSG G VFLLSSKAGG GLNL+GANRL+LF Sbjct: 920 MCTSQGWNWLRLDGSTEASKRQLLVDQLNSGVGDVFVFLLSSKAGGTGLNLIGANRLVLF 979
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPATD+QA+ARIWREGQ K V+IYRL +TGSIEEKIYQRQ++KG +++ VE + + Sbjct: 980 DPDWNPATDSQAIARIWREGQLKPVLIYRLLSTGSIEEKIYQRQIMKGGMSAAVEGDADV 1039
Query: 135 KNKSSG-GRYFSREELRELFSLNKETQCDTYDLL 37 K S GR+FS+EEL+ELF+LN T CDT+DL+ Sbjct: 1040 HTKKSNIGRHFSKEELKELFTLNLATNCDTFDLI 1073
>tr|A2QSF7|A2QSF7_ASPNC Contig An08c0280, complete genome OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An08g10560 PE=4 SV=1 Length = 846
Score = 177 bits (450), Expect = 2e-43 Identities = 92/161 (57%), Positives = 111/161 (68%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 LC +G+ LRLDG V RQKLVD+FN+ G E VFLLSSKAGG GLNL+GANRL+LF Sbjct: 635 LCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLF 694
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPA D QA+AR+WR+GQ+K +YR ATGSIEEKI+QRQ K ++S V D+ E Sbjct: 695 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE- 753
Query: 135 KNKSSGGRYFSREELRELFSLNKETQCDTYDLLLGRELRID 13 R+FS E LRELF ET+ DT+D + R D Sbjct: 754 ----DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPD 790
>tr|Q4PCT0|Q4PCT0_USTMA Putative uncharacterized protein OS=Ustilago maydis GN=UM02083.1 PE=4 SV=1 Length = 870
Score = 176 bits (447), Expect = 4e-43 Identities = 86/151 (56%), Positives = 106/151 (70%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 +C W RLDG + RQKLVDRFN G E +FLLSSKAGG GLNL+GANRL+LF Sbjct: 664 MCRANRWGMFRLDGTMTINKRQKLVDRFNDPEGKEFIFLLSSKAGGCGLNLIGANRLVLF 723
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPA+D QA+AR+WR+GQ+K+ +YR ATGSIEEKI QRQ K ++S V D + Sbjct: 724 DPDWNPASDQQALARVWRDGQKKSCFVYRFIATGSIEEKILQRQSHKQSLSSCVVDEAQ- 782
Query: 135 KNKSSGGRYFSREELRELFSLNKETQCDTYD 43 R+FS E+LR LF+ +ET CDT+D Sbjct: 783 ----DAARHFSGEDLRALFTFKEETACDTHD 809
>tr|A1CUC9|A1CUC9_ASPCL SNF2 family N-terminal domain protein OS=Aspergillus clavatus GN=ACLA_086150 PE=4 SV=1 Length = 682
Score = 176 bits (446), Expect = 5e-43 Identities = 92/161 (57%), Positives = 110/161 (68%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 LC +G+ LRLDG V RQKLVD+FN G E VFLLSSKAGG GLNL+GANRL+LF Sbjct: 471 LCRSRGYGSLRLDGTMTVNKRQKLVDKFNDPNGEEFVFLLSSKAGGCGLNLIGANRLVLF 530
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPA D QA+AR+WR+GQ+K +YR ATGSIEEKI+QRQ K ++S V D+ E Sbjct: 531 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE- 589
Query: 135 KNKSSGGRYFSREELRELFSLNKETQCDTYDLLLGRELRID 13 R+FS E LRELF ET+ DT+D + R D Sbjct: 590 ----DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPD 626
>tr|Q2ULH2|Q2ULH2_ASPOR DNA repair protein OS=Aspergillus oryzae GN=AO090003000413 PE=4 SV=1 Length = 815
Score = 176 bits (445), Expect = 7e-43 Identities = 92/161 (57%), Positives = 111/161 (68%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 LC +G+ LRLDG V RQKLVD+FN+ G E VFLLSSKAGG GLNL+GANRL+LF Sbjct: 604 LCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLF 663
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPA D QA+AR+WR+GQ+K +YR ATGSIEEKI+QRQ K ++S V D+ E Sbjct: 664 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE- 722
Query: 135 KNKSSGGRYFSREELRELFSLNKETQCDTYDLLLGRELRID 13 R+FS E LRELF ET+ DT+D + R D Sbjct: 723 ----DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPD 759
>tr|Q0CSL2|Q0CSL2_ASPTN DNA repair and recombination protein RAD54 OS=Aspergillus terreus (strain NIH 2624) GN=ATEG_03322 PE=4 SV=1 Length = 821
Score = 176 bits (445), Expect = 7e-43 Identities = 92/161 (57%), Positives = 110/161 (68%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 LC +G+ LRLDG V RQKLVD+FN G E VFLLSSKAGG GLNL+GANRL+LF Sbjct: 610 LCRSRGYGSLRLDGTMNVKKRQKLVDKFNDPDGEEFVFLLSSKAGGCGLNLIGANRLVLF 669
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPA D QA+AR+WR+GQ+K +YR ATGSIEEKI+QRQ K ++S V D+ E Sbjct: 670 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE- 728
Query: 135 KNKSSGGRYFSREELRELFSLNKETQCDTYDLLLGRELRID 13 R+FS E LRELF ET+ DT+D + R D Sbjct: 729 ----DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPD 765
>tr|B8N214|B8N214_ASPFL DsDNA-dependent ATPase Rad54, putative OS=Aspergillus flavus NRRL3357 GN=AFLA_034080 PE=4 SV=1 Length = 682
Score = 176 bits (445), Expect = 7e-43 Identities = 92/161 (57%), Positives = 111/161 (68%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 LC +G+ LRLDG V RQKLVD+FN+ G E VFLLSSKAGG GLNL+GANRL+LF Sbjct: 471 LCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLF 530
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPA D QA+AR+WR+GQ+K +YR ATGSIEEKI+QRQ K ++S V D+ E Sbjct: 531 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE- 589
Query: 135 KNKSSGGRYFSREELRELFSLNKETQCDTYDLLLGRELRID 13 R+FS E LRELF ET+ DT+D + R D Sbjct: 590 ----DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPD 626
>tr|Q4WLN4|Q4WLN4_ASPFU DsDNA-dependent ATPase Rad54, putative OS=Aspergillus fumigatus GN=AFUA_6G12910 PE=4 SV=2 Length = 807
Score = 175 bits (444), Expect = 9e-43 Identities = 91/161 (56%), Positives = 111/161 (68%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 LC +G+ LRLDG + RQKLVD+FN+ G E VFLLSSKAGG GLNL+GANRL+LF Sbjct: 596 LCRSRGYGSLRLDGTMNINKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLF 655
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPA D QA+AR+WR+GQ+K +YR ATGSIEEKI+QRQ K ++S V D+ E Sbjct: 656 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE- 714
Query: 135 KNKSSGGRYFSREELRELFSLNKETQCDTYDLLLGRELRID 13 R+FS E LRELF ET+ DT+D + R D Sbjct: 715 ----DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPD 751
>tr|B0XM07|B0XM07_ASPFC DsDNA-dependent ATPase Rad54, putative OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_001840 PE=4 SV=1 Length = 681
Score = 175 bits (444), Expect = 9e-43 Identities = 91/161 (56%), Positives = 111/161 (68%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 LC +G+ LRLDG + RQKLVD+FN+ G E VFLLSSKAGG GLNL+GANRL+LF Sbjct: 470 LCRSRGYGSLRLDGTMNINKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLF 529
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPA D QA+AR+WR+GQ+K +YR ATGSIEEKI+QRQ K ++S V D+ E Sbjct: 530 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE- 588
Query: 135 KNKSSGGRYFSREELRELFSLNKETQCDTYDLLLGRELRID 13 R+FS E LRELF ET+ DT+D + R D Sbjct: 589 ----DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPD 625
>tr|A1DP12|A1DP12_NEOFI SNF2 family N-terminal domain protein OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181) GN=NFIA_058840 PE=4 SV=1 Length = 835
Score = 175 bits (444), Expect = 9e-43 Identities = 91/161 (56%), Positives = 111/161 (68%) Frame = -1
Query: 495 LCEWKGWKWLRLDGATLVADRQKLVDRFNSGFGGERVFLLSSKAGGMGLNLVGANRLILF 316 LC +G+ LRLDG + RQKLVD+FN+ G E VFLLSSKAGG GLNL+GANRL+LF Sbjct: 624 LCRSRGYGSLRLDGTMNINKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLF 683
Query: 315 DPDWNPATDAQAMARIWREGQRKAVIIYRLFATGSIEEKIYQRQMVKGEIASTVEDNVEC 136 DPDWNPA D QA+AR+WR+GQ+K +YR ATGSIEEKI+QRQ K ++S V D+ E Sbjct: 684 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAE- 742
Query: 135 KNKSSGGRYFSREELRELFSLNKETQCDTYDLLLGRELRID 13 R+FS E LRELF ET+ DT+D + R D Sbjct: 743 ----DVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPD 779
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