BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919903|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_E06.
         (402 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8A1A0|RHAD_BACTN Rhamnulose-1-phosphate aldolase OS=Bacteroi...    30   4.9  
sp|Q8BGE5|FANCM_MOUSE Fanconi anemia group M protein homolog OS=...    29   8.3  

>sp|Q8A1A0|RHAD_BACTN Rhamnulose-1-phosphate aldolase OS=Bacteroides
           thetaiotaomicron GN=rhaD PE=3 SV=1
          Length = 269

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = -2

Query: 350 RPLRASSPYPCLAEESASQFNHQPVRMSIM-DLKMKDTPYN*CIQTHPRQL 201
           R L   + Y  +A+E+ +  +  P  +S+  DL  K++PY   + THP +L
Sbjct: 98  RILDDCASYVIIADEAVAPTSELPSHLSVHNDLLSKNSPYKASVHTHPIEL 148


>sp|Q8BGE5|FANCM_MOUSE Fanconi anemia group M protein homolog OS=Mus
            musculus GN=Fancm PE=2 SV=3
          Length = 2021

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = -2

Query: 368  VNIEERRPLRASSPYPCLAEESASQFNHQPVRMSIMDLKMKDTPYN*CIQTHPRQLFLRE 189
            V  +    ++++SP PC   ES  ++ + PV++     +  DT    C  +    L + E
Sbjct: 1710 VKAQSHNKIKSASP-PCTGVESRKEYGNHPVQLKADSQEHSDTSAAPCSTS---LLHVAE 1765

Query: 188  SYTAKRRL 165
             +TA R L
Sbjct: 1766 GHTAPRHL 1773

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919903|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_E06.
         (402 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0F2N0|Q0F2N0_9PROT Putative uncharacterized protein OS=Marip...    34   3.1  

>tr|Q0F2N0|Q0F2N0_9PROT Putative uncharacterized protein
           OS=Mariprofundus ferrooxydans PV-1 GN=SPV1_01192 PE=4
           SV=1
          Length = 171

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
 Frame = +3

Query: 189 LSQKELSWVRLN----ALIIWSVLHLQIHDGHAHRLVIELGCTF-LC-QAWVW 329
           L ++ LSW RL     ALI++  L  Q+HD +  RL I +G T  +C   WVW
Sbjct: 97  LFRQTLSWTRLGLLATALIVFIPLGAQLHDPNDARLGISIGMTLAICGLMWVW 149