BP919905 |
Clone id |
YMU001_000130_E08 |
Library |
YMU01 |
Length |
345 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000130_E08. |
Accession |
BP919905 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TCATTGCTGTCCGTAGCTGCTCAGAGCTTCCTCGAGGAACATGCAGACTTTCAAGCTCTT CCCTTGAGCATATGTCGTGATGCCTTTGCTATAGTTTCCTGGAGAATCTTCGTTGCCTCT CATTCTCCGCTTCTTGATTTCTGATATCTTGCATCACTTTCTCCTGCATGATGCTCTTAT AATGCGATTCTGCAGCAACACCTTTGGCTATTTCTTCTTCAACTGCTATAAGCTCGTTTT CCCTTGCTTGAAAAGCTTCAATGTCATCTTTCGCAGACTCATGTAATAGATCTATCTCAG ACCTTATGGAGGAAACCTTCTCTTGGCTTTGTGAACGCTTAATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q06704 |
Definition |
sp|Q06704|IMH1_YEAST Golgin IMH1 OS=Saccharomyces cerevisiae |
Align length |
59 |
Score (bit) |
32.3 |
E-value |
0.75 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PBP4 |
Definition |
tr|A7PBP4|A7PBP4_VITVI Chromosome chr16 scaffold_10, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
110 |
Score (bit) |
62.4 |
E-value |
1.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919905|Adiantum capillus-veneris mRNA, clone: YMU001_000130_E08. (345 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PBP4|A7PBP4_VITVI Chromosome chr16 scaffold_10, whole genom... 62 1e-08 tr|Q9S722|Q9S722_ARATH SMC-like protein OS=Arabidopsis thaliana ... 59 2e-07 tr|Q9FII7|Q9FII7_ARATH SMC-like protein OS=Arabidopsis thaliana ... 59 2e-07 tr|A9SB22|A9SB22_PHYPA Predicted protein OS=Physcomitrella paten... 54 5e-06 tr|Q9FLR5|Q9FLR5_ARATH SMC-like protein OS=Arabidopsis thaliana ... 49 1e-04 tr|B3L069|B3L069_PLAKH Putative uncharacterized protein OS=Plasm... 36 1.1 tr|A5KAF7|A5KAF7_PLAVI Putative uncharacterized protein OS=Plasm... 35 1.9 tr|A2F531|A2F531_TRIVA Viral A-type inclusion protein, putative ... 34 3.2 tr|A5WF04|A5WF04_PSYWF Putative uncharacterized protein OS=Psych... 33 5.4 tr|Q4DZ12|Q4DZ12_TRYCR Putative uncharacterized protein OS=Trypa... 33 5.4 tr|B5VNK9|B5VNK9_YEAS6 YLR309Cp-like protein (Fragment) OS=Sacch... 33 5.4 tr|B3RHI8|B3RHI8_YEAS1 Putative uncharacterized protein OS=Sacch... 33 5.4 tr|Q1HTS3|Q1HTS3_9POXV F3L OS=Squirrelpox virus GN=F3L PE=4 SV=1 33 7.1 tr|Q4DAG7|Q4DAG7_TRYCR Putative uncharacterized protein OS=Trypa... 33 7.1 tr|B8LWI1|B8LWI1_9EURO Putative uncharacterized protein OS=Talar... 33 7.1 tr|A6UUY2|A6UUY2_META3 Permease OS=Methanococcus aeolicus (strai... 33 9.3
>tr|A7PBP4|A7PBP4_VITVI Chromosome chr16 scaffold_10, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014189001 PE=4 SV=1 Length = 623
Score = 62.4 bits (150), Expect = 1e-08 Identities = 32/110 (29%), Positives = 60/110 (54%) Frame = -3
Query: 343 IKRSQSQEKVSSIRSEIDLLHESAKDDIEAFQARENELIAVEEEIAKGVAAESHYKSIMQ 164 ++ S++ K + ++ + L ESAK +I+A++A ENEL+ +E+E+ ++HY+ IM Sbjct: 308 LRMSKADAKANDLKLSFENLCESAKVEIDAYEAAENELVVIEQELCSAETEKTHYEGIMN 367
Query: 163 EKVMQDIXXXXXXXXXXXRFSRKL*QRHHDICSREELESLHVPRGSSEQL 14 KV+ DI ++ ++ IC E+E+L + + EQL Sbjct: 368 NKVLPDIKEAETQYQELEHNRKESCRKASIICPESEIEALGGCKSTPEQL 417
>tr|Q9S722|Q9S722_ARATH SMC-like protein OS=Arabidopsis thaliana GN=MIM PE=2 SV=1 Length = 1055
Score = 58.5 bits (140), Expect = 2e-07 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Frame = -3
Query: 331 QSQEKVSSIRSEIDLLHESAKDDIEAFQARENELIAVEEEIAKGVAAESHYKSIMQEKVM 152 +++ K + + + + + ESAK +I+AF+ ENEL +E+++ A + HY++IM+ KV+ Sbjct: 743 EAELKANKLTALFENMRESAKGEIDAFEEAENELKKIEKDLQSAEAEKIHYENIMKNKVL 802
Query: 151 QDIXXXXXXXXXXXRFSRKL*QRHHDICSREELESLHVPRGSS-EQL 14 DI ++ Q+ +IC E+ESL GS+ EQL Sbjct: 803 PDIKNAEANYEELKNKRKESDQKASEICPESEIESLGPWDGSTPEQL 849
>tr|Q9FII7|Q9FII7_ARATH SMC-like protein OS=Arabidopsis thaliana GN=At5g61460 PE=4 SV=1 Length = 1057
Score = 58.5 bits (140), Expect = 2e-07 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 1/107 (0%) Frame = -3
Query: 331 QSQEKVSSIRSEIDLLHESAKDDIEAFQARENELIAVEEEIAKGVAAESHYKSIMQEKVM 152 +++ K + + + + + ESAK +I+AF+ ENEL +E+++ A + HY++IM+ KV+ Sbjct: 745 EAELKANKLTALFENMRESAKGEIDAFEEAENELKKIEKDLQSAEAEKIHYENIMKNKVL 804
Query: 151 QDIXXXXXXXXXXXRFSRKL*QRHHDICSREELESLHVPRGSS-EQL 14 DI ++ Q+ +IC E+ESL GS+ EQL Sbjct: 805 PDIKNAEANYEELKNKRKESDQKASEICPESEIESLGPWDGSTPEQL 851
>tr|A9SB22|A9SB22_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_210410 PE=4 SV=1 Length = 1028
Score = 53.5 bits (127), Expect = 5e-06 Identities = 25/66 (37%), Positives = 43/66 (65%) Frame = -3
Query: 340 KRSQSQEKVSSIRSEIDLLHESAKDDIEAFQARENELIAVEEEIAKGVAAESHYKSIMQE 161 K ++QEKV + +++ D L ESAK DIEA + E EL+ +E+E+ + V + H++ +M+ Sbjct: 713 KVERAQEKVDAAKAQFDGLRESAKVDIEASRIAERELMLLEDELKEAVKQKEHFEGVMER 772
Query: 160 KVMQDI 143 V+ I Sbjct: 773 NVLAPI 778
>tr|Q9FLR5|Q9FLR5_ARATH SMC-like protein OS=Arabidopsis thaliana GN=At5g07660 PE=4 SV=1 Length = 1058
Score = 48.9 bits (115), Expect = 1e-04 Identities = 25/96 (26%), Positives = 53/96 (55%) Frame = -3
Query: 331 QSQEKVSSIRSEIDLLHESAKDDIEAFQARENELIAVEEEIAKGVAAESHYKSIMQEKVM 152 +++ K + +++ + L+ESAK +IEA + E+EL E+E+ ++HY+ IM++KV+ Sbjct: 746 EAELKANELKASYENLYESAKGEIEALEKAEDELKEKEDELHSAETEKNHYEDIMKDKVL 805
Query: 151 QDIXXXXXXXXXXXRFSRKL*QRHHDICSREELESL 44 +I ++ ++ IC E+++L Sbjct: 806 PEIKQAETIYKELEMKRQESNKKASIICPESEIKAL 841
>tr|B3L069|B3L069_PLAKH Putative uncharacterized protein OS=Plasmodium knowlesi (strain H) GN=PKH_030070 PE=4 SV=1 Length = 952
Score = 35.8 bits (81), Expect = 1.1 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 10/61 (16%) Frame = -3
Query: 322 EKVSSIRSEIDLLHESAKDDIEAFQAR---------ENELIAVEEEIAKGV-AAESHYKS 173 +K+ +R E ++L E K+ IEAFQA+ ENEL+ E + K + + YK+ Sbjct: 674 QKIKKLRGEKNILEEDLKNTIEAFQAQLDTVKRFKDENELVKTNEHLMKEIKLLQDKYKN 733
Query: 172 I 170 + Sbjct: 734 V 734
>tr|A5KAF7|A5KAF7_PLAVI Putative uncharacterized protein OS=Plasmodium vivax GN=PVX_000550 PE=4 SV=1 Length = 967
Score = 35.0 bits (79), Expect = 1.9 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 10/61 (16%) Frame = -3
Query: 322 EKVSSIRSEIDLLHESAKDDIEAFQAR---------ENELIAVEEEIAKGV-AAESHYKS 173 +K+ +R E ++L E K+ IEAFQA+ ENEL+ E + K + + YK Sbjct: 692 QKIKKLRGEKNMLEEDLKNTIEAFQAQLDTVKRFKDENELLKTNEHLMKEIKLLQDKYKD 751
Query: 172 I 170 + Sbjct: 752 V 752
>tr|A2F531|A2F531_TRIVA Viral A-type inclusion protein, putative OS=Trichomonas vaginalis G3 GN=TVAG_216960 PE=4 SV=1 Length = 3748
Score = 34.3 bits (77), Expect = 3.2 Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 2/106 (1%) Frame = -3
Query: 322 EKVSSIRSEIDLLHESAKDDIEAFQARENELIAVEEEIAKGVAAESHYKSIMQE--KVMQ 149 E++ ++S+ID H+ D EA + E EL +++EE+ K E I +E K+ + Sbjct: 1353 EEIEKVKSDIDSKHQLNNDIKEANEVVEEELNSLKEELEKIEPVEDKSDEIRKEIVKIQK 1412
Query: 148 DIXXXXXXXXXXXRFSRKL*QRHHDICSREELESLHVPRGSSEQLR 11 +I + L + +D+ + +LE + + SE+++ Sbjct: 1413 EIETKKATNCGISESNELLNKELNDL--KNQLEEIAEEKDDSEEIK 1456
>tr|A5WF04|A5WF04_PSYWF Putative uncharacterized protein OS=Psychrobacter sp. (strain PRwf-1) GN=PsycPRwf_1299 PE=4 SV=1 Length = 1211
Score = 33.5 bits (75), Expect = 5.4 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%) Frame = -3
Query: 343 IKRSQSQEKV--SSIRSEIDLLHESAKDDIEAFQAR-ENELIAVEEEIAKGVAAE 188 I R Q++ K ++IRSE+ L + KDDIEA A +EL ++I + ++AE Sbjct: 699 ISREQAERKSENTAIRSELALADQGLKDDIEAKDAAIRSELTQSSQQIQEAISAE 753
>tr|Q4DZ12|Q4DZ12_TRYCR Putative uncharacterized protein OS=Trypanosoma cruzi GN=Tc00.1047053510303.70 PE=4 SV=1 Length = 653
Score = 33.5 bits (75), Expect = 5.4 Identities = 16/43 (37%), Positives = 28/43 (65%) Frame = -3
Query: 340 KRSQSQEKVSSIRSEIDLLHESAKDDIEAFQARENELIAVEEE 212 +RS E+V ++R +ID+L + + E FQ RENE++ + +E Sbjct: 244 RRSGIIEEVKALRRDIDVLLTAQRRGDEIFQERENEMLEIMKE 286
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