BP919907
Clone id YMU001_000130_E10
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAGCACGAGTGTAGTCTGCAAGTGGTAAACCTACAAGTAGGGTCACAACGTTAGAGAGAG
GGAATGAGATTGCTAGCAAAGAGGTAGAGAGAGGAGAGAAAACGCTACAGAGCGCTCTAG
AGAGAGAAAACTCTAGAGAGAATGTAGCCCAAATGTTGGAAGCTCTTGTCACTGATGACA
ACATACCAAACAATACAAGGGTGGGATTGCCTACATAGGAAAGTTTGGGATTTTCCATAA
CCGGCCTAAAAATCCCATGACTTTGGAAAATGACCAAAAAACTGCTAATAAATGTGAAAA
CTCATTGTAATTGACCTACAACACACATTTAATAGCACAACTGCAGAAATTGAAGACTCT
GACCTCGTGAATTGTAGGAATGCGAGTCTTGCCTCGTGCTAGCACTCTGGGTGGGCACCA
TTGTGGAATGCACCGCCGAAAAGGTACATCTACCTCAAATATGACCGGACACAACCCT
■■Homology search results ■■ -
sp_hit_id Q94VK0
Definition sp|Q94VK0|NU1M_VARBA NADH-ubiquinone oxidoreductase chain 1 OS=Varanus baritji
Align length 72
Score (bit) 35.4
E-value 0.13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919907|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_E10.
(478 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q94VK0|NU1M_VARBA NADH-ubiquinone oxidoreductase chain 1 OS=V... 35 0.13
sp|A2A870|FBF1_MOUSE Fas-binding factor 1 OS=Mus musculus GN=Fbf... 33 0.65
sp|O31426|SKFD_BACSU Uncharacterized protein skfD OS=Bacillus su... 30 4.3
sp|A2AQH4|BCORL_MOUSE BCoR-like protein 1 OS=Mus musculus GN=Bco... 30 4.3
sp|Q1LUE5|ZCH18_DANRE Zinc finger CCCH domain-containing protein... 30 5.6
sp|P17594|POLG_EMCVD Genome polyprotein OS=Encephalomyocarditis ... 29 9.4
sp|P17593|POLG_EMCVB Genome polyprotein OS=Encephalomyocarditis ... 29 9.4
sp|P41913|GDS1_YEAST Protein GDS1 OS=Saccharomyces cerevisiae GN... 29 9.4

>sp|Q94VK0|NU1M_VARBA NADH-ubiquinone oxidoreductase chain 1
OS=Varanus baritji GN=MT-ND1 PE=3 SV=1
Length = 321

Score = 35.4 bits (80), Expect = 0.13
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = -1

Query: 259 HGIFRPVMENPKLSYV-------GNPTLVLFGMLSSVTRASNIWATFSLEFSLSRALCSV 101
HG+ +P+ + KL +PTL++ L ++T A IWA + +SL+ +
Sbjct: 47 HGLLQPIADGLKLFIKEPVRPLNASPTLLILSPLLAITAAMLIWAPIPMPYSLANLNLGL 106

Query: 100 FSPLSTSLLAIS 65
S L+ S +A++
Sbjct: 107 LSILAISGMAVN 118


>sp|A2A870|FBF1_MOUSE Fas-binding factor 1 OS=Mus musculus GN=Fbf1
PE=2 SV=1
Length = 1173

Score = 33.1 bits (74), Expect = 0.65
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +3

Query: 6 RV*SASGKPTSRVTTLERGNEIASKEVERGEKTLQSALERENSRENVAQMLE 161
R+ AS + +R +E +++ASK+ E GE+ LQ A + +N ++ Q+++
Sbjct: 1004 RLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQ 1055


>sp|O31426|SKFD_BACSU Uncharacterized protein skfD OS=Bacillus
subtilis GN=skfD PE=2 SV=1
Length = 311

Score = 30.4 bits (67), Expect = 4.3
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = -1

Query: 238 MENPKLSYVGNPTLVLFGMLSSVTRASNIWATFSLEFSLSRALCSVFSPLSTSLLAISFP 59
++ ++SY+G +L +S V R + +TF + L AL + + L L+ +
Sbjct: 5 LQGGRISYIGTEQEILTDQMSKVIRDEQVESTFGVSGMLGSALAMILAIL--ILVFMDVQ 62

Query: 58 LSNVVTLLVGL 26
S + +L++GL
Sbjct: 63 TSIIFSLVLGL 73


>sp|A2AQH4|BCORL_MOUSE BCoR-like protein 1 OS=Mus musculus GN=Bcorl1
PE=2 SV=1
Length = 1781

Score = 30.4 bits (67), Expect = 4.3
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -1

Query: 229 PKLSYVGNPTLV--LFGMLSSVTRASNIWATFSLEFSLSRALCSVFSPLSTSL 77
PK+ YVGNP L LSS + S E S SRA CS ++PLST +
Sbjct: 97 PKMDYVGNPAEAEGLLVPLSSPGDGLKLPTPDSTEASHSRANCS-WTPLSTQM 148


>sp|Q1LUE5|ZCH18_DANRE Zinc finger CCCH domain-containing protein 18
OS=Danio rerio GN=zc3h18 PE=1 SV=1
Length = 1148

Score = 30.0 bits (66), Expect = 5.6
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2

Query: 44 HNVRERE*DC*QRGRERRENATERSRERK 130
H RERE + R RERR+ ER RER+
Sbjct: 542 HRERERERERDHRERERRQRERERERERE 570


>sp|P17594|POLG_EMCVD Genome polyprotein OS=Encephalomyocarditis virus
(strain emc-d diabetogenic) PE=1 SV=2
Length = 2292

Score = 29.3 bits (64), Expect = 9.4
Identities = 24/65 (36%), Positives = 29/65 (44%)
Frame = +3

Query: 18 ASGKPTSRVTTLERGNEIASKEVERGEKTLQSALERENSRENVAQMLEALVTDDNIPNNT 197
A K TS +L + +KE TL L R+N R V Q LE L D + NT
Sbjct: 1885 AFSKHTSNQESLPPVFRMVAKEYANRVFTL---LGRDNGRLTVKQALEGLEGMDPMDKNT 1941

Query: 198 RVGLP 212
GLP
Sbjct: 1942 SPGLP 1946


>sp|P17593|POLG_EMCVB Genome polyprotein OS=Encephalomyocarditis virus
(strain emc-b nondiabetogenic) PE=3 SV=1
Length = 2292

Score = 29.3 bits (64), Expect = 9.4
Identities = 24/65 (36%), Positives = 29/65 (44%)
Frame = +3

Query: 18 ASGKPTSRVTTLERGNEIASKEVERGEKTLQSALERENSRENVAQMLEALVTDDNIPNNT 197
A K TS +L + +KE TL L R+N R V Q LE L D + NT
Sbjct: 1885 AFSKHTSNQESLPPVFRMVAKEYANRVFTL---LGRDNGRLTVKQALEGLEGMDPMDKNT 1941

Query: 198 RVGLP 212
GLP
Sbjct: 1942 SPGLP 1946


>sp|P41913|GDS1_YEAST Protein GDS1 OS=Saccharomyces cerevisiae
GN=GDS1 PE=1 SV=1
Length = 522

Score = 29.3 bits (64), Expect = 9.4
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3

Query: 78 KEVERGEKTLQSALERENSRENVAQML 158
K++E+GEKTL AL RE S + +ML
Sbjct: 172 KKIEKGEKTLTYALSREWSNSSPRRML 198


tr_hit_id B5JJK5
Definition tr|B5JJK5|B5JJK5_9BACT Putative uncharacterized protein OS=Verrucomicrobiae bacterium DG1235
Align length 67
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919907|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_E10.
(478 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5JJK5|B5JJK5_9BACT Putative uncharacterized protein OS=Verru... 36 1.1
tr|Q8SXX0|Q8SXX0_DROME CG15916 OS=Drosophila melanogaster GN=CG1... 35 1.9
tr|B5W2F9|B5W2F9_SPIMA Methyltransferase type 11 OS=Arthrospira ... 34 3.2
tr|Q8Z1S2|Q8Z1S2_SALTI Large repetitive protein OS=Salmonella ty... 34 4.2
tr|Q8BTD4|Q8BTD4_MOUSE Putative uncharacterized protein (Fragmen... 33 7.1
tr|B7ZN01|B7ZN01_MOUSE Fbf1 protein OS=Mus musculus GN=Fbf1 PE=2... 33 7.1
tr|B2RQ77|B2RQ77_MOUSE Fas (TNFRSF6) binding factor 1 OS=Mus mus... 33 7.1
tr|Q7Q461|Q7Q461_ANOGA AGAP008236-PA (Fragment) OS=Anopheles gam... 33 7.1
tr|Q94VJ0|Q94VJ0_VARER NADH-ubiquinone oxidoreductase chain 1 OS... 33 9.2
tr|Q94VH9|Q94VH9_VARGL NADH-ubiquinone oxidoreductase chain 1 OS... 33 9.2
tr|B6AF21|B6AF21_9CRYT Putative uncharacterized protein OS=Crypt... 33 9.2

>tr|B5JJK5|B5JJK5_9BACT Putative uncharacterized protein
OS=Verrucomicrobiae bacterium DG1235 GN=VDG1235_4556
PE=4 SV=1
Length = 218

Score = 35.8 bits (81), Expect = 1.1
Identities = 23/67 (34%), Positives = 34/67 (50%)
Frame = -1

Query: 319 VGQLQ*VFTFISSFLVIFQSHGIFRPVMENPKLSYVGNPTLVLFGMLSSVTRASNIWATF 140
VG+L TF+++ L + G+ RP ENP S + T LFG+ + NI+
Sbjct: 14 VGELAPAGTFVATCLDVLDQFGVERPKFENPNESEKIDVTRFLFGLRG---QDGNIYKVQ 70

Query: 139 SLEFSLS 119
S EF +S
Sbjct: 71 SYEFRIS 77


>tr|Q8SXX0|Q8SXX0_DROME CG15916 OS=Drosophila melanogaster
GN=CG15916 PE=2 SV=1
Length = 271

Score = 35.0 bits (79), Expect = 1.9
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +1

Query: 310 IDLQHTFNSTTAEIEDSDLVNCRNAS 387
IDLQH+++S+ AE+E+SD +C+ A+
Sbjct: 202 IDLQHSYSSSNAEVEESDAQSCQTAA 227


>tr|B5W2F9|B5W2F9_SPIMA Methyltransferase type 11 OS=Arthrospira
maxima CS-328 GN=AmaxDRAFT_2957 PE=4 SV=1
Length = 317

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = -1

Query: 277 LVIFQSHGIFRPVMENPKLSYVGNPTLVLFGMLSSVTRASNIWATFSLEFSLS 119
L I +SHG+ V NPK + + N VLF ++ S ++ + TF +E +LS
Sbjct: 241 LRILRSHGVLAIVDNNPKSAVIQNLPPVLFTLMKSTEPWTDDYYTFDVETALS 293


>tr|Q8Z1S2|Q8Z1S2_SALTI Large repetitive protein OS=Salmonella typhi
GN=STY4458 PE=4 SV=1
Length = 3283

Score = 33.9 bits (76), Expect = 4.2
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +3

Query: 54 ERGNEIASKEVERGEKTLQSALERENSRENVAQMLEALVTDDNIPNN 194
++ E A K E EKTL A E +NS + + +ML+ + D+ +N
Sbjct: 132 DKAKEEAEKAKEAAEKTLNEAFEVQNSSKQIEEMLQNFLADNVAKDN 178


>tr|Q8BTD4|Q8BTD4_MOUSE Putative uncharacterized protein (Fragment)
OS=Mus musculus GN=Fbf1 PE=2 SV=1
Length = 177

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +3

Query: 6 RV*SASGKPTSRVTTLERGNEIASKEVERGEKTLQSALERENSRENVAQMLE 161
R+ AS + +R +E +++ASK+ E GE+ LQ A + +N ++ Q+++
Sbjct: 8 RLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQ 59


>tr|B7ZN01|B7ZN01_MOUSE Fbf1 protein OS=Mus musculus GN=Fbf1 PE=2 SV=1
Length = 1172

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +3

Query: 6 RV*SASGKPTSRVTTLERGNEIASKEVERGEKTLQSALERENSRENVAQMLE 161
R+ AS + +R +E +++ASK+ E GE+ LQ A + +N ++ Q+++
Sbjct: 1003 RLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQ 1054


>tr|B2RQ77|B2RQ77_MOUSE Fas (TNFRSF6) binding factor 1 OS=Mus musculus
GN=Fbf1 PE=2 SV=1
Length = 1173

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +3

Query: 6 RV*SASGKPTSRVTTLERGNEIASKEVERGEKTLQSALERENSRENVAQMLE 161
R+ AS + +R +E +++ASK+ E GE+ LQ A + +N ++ Q+++
Sbjct: 1004 RLHKASLRLQARAQEVEHMSKVASKKYEEGEQALQEAQQMQNEQQGRLQVVQ 1055


>tr|Q7Q461|Q7Q461_ANOGA AGAP008236-PA (Fragment) OS=Anopheles gambiae
GN=AGAP008236 PE=4 SV=4
Length = 1560

Score = 33.1 bits (74), Expect = 7.1
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3

Query: 15 SASGKPTSRVTTLERGNEIASKEVERGEKTLQSALERENSRENVAQMLEALVTD 176
+AS T+R +++ E +SKE++R E+ A E+E RE A AL +D
Sbjct: 1278 TASSSSTNRESSVSTSREKSSKEIKREER----AREKEREREEAAAAAAALASD 1327


>tr|Q94VJ0|Q94VJ0_VARER NADH-ubiquinone oxidoreductase chain 1
OS=Varanus eremius GN=ND1 PE=3 SV=1
Length = 320

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Frame = -1

Query: 259 HGIFRPVMENPKLSYV-------GNPTLVLFGMLSSVTRASNIWATFSLEFSLSRALCSV 101
+G+ +P+ + KL +PTL++F L +++ A IWA + ++L+ +
Sbjct: 46 YGLLQPIADGLKLFIKEPVRPLNASPTLLIFSPLLALSTAMLIWAPIPMPYTLTNLNLGL 105

Query: 100 FSPLSTSLLAIS 65
S L+ S +A++
Sbjct: 106 LSILAISSMAVN 117


>tr|Q94VH9|Q94VH9_VARGL NADH-ubiquinone oxidoreductase chain 1
OS=Varanus gilleni GN=ND1 PE=3 SV=1
Length = 319

Score = 32.7 bits (73), Expect = 9.2
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = -1

Query: 259 HGIFRPVMENPKLSYV-------GNPTLVLFGMLSSVTRASNIWATFSLEFSLSRALCSV 101
+G+ +P+ + KL +PTL++ L ++T A IW + FSL+ +
Sbjct: 45 YGLLQPIADGLKLFIKEPVRPLNASPTLLILSPLLALTTAMLIWTPIPMPFSLANLNLGL 104

Query: 100 FSPLSTSLLAIS 65
S L+ S +A++
Sbjct: 105 LSILAISSMAVN 116