BP919912
Clone id YMU001_000130_F03
Library
Length 402
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTCCATGGGAGCTGCCCACCTGGCCCACTACAAAGATCTACACTTCCCAAATCAAACGC
GAATGTGCGGTAGTCTTCTAGTTTCCCATTCCGGGGATGAGGATAGCATTCTTCAATAAT
CTGCCCGCTCCTAGGCGCTCCATACGGGTAGACATACTCCTCTATGTATCCACTCCTTGG
CAGACCCCCACTTGCCCCTGCCTTTCCTCTCATTGTCCAATCTTCATCATCACAAAAAGT
TCAGATGCTGACTCTCTTGAGAGTATAGCCAGAGCCGATCTTTGATAAGAAGGAAGTGTA
AGAAGTTTCTTGTTCTTTTGGCAGCTTTTCCAAATATATCAGACCTCTGGCTATCAGCTG
CTCAAGAGCAAAAGAAAATTTATCACTTGGATTGTCTACTTG
■■Homology search results ■■ -
sp_hit_id Q8K9E1
Definition sp|Q8K9E1|SYQ_BUCAP Glutaminyl-tRNA synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum
Align length 40
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919912|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_F03.
(402 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8K9E1|SYQ_BUCAP Glutaminyl-tRNA synthetase OS=Buchnera aphid... 30 3.7
sp|Q01883|RAG1_ORYSJ Seed allergenic protein RAG1 OS=Oryza sativ... 30 3.7
sp|O02822|IRK11_RABIT ATP-sensitive inward rectifier potassium c... 30 3.7
sp|P79775|ANF1_CHICK Homeobox protein ANF-1 OS=Gallus gallus PE=... 30 3.7
sp|Q7M722|TR114_MOUSE Taste receptor type 2 member 114 OS=Mus mu... 29 6.3
sp|Q5XUN4|JAD1D_PANTR Histone demethylase JARID1D OS=Pan troglod... 29 8.2
sp|Q9BY66|JAD1D_HUMAN Histone demethylase JARID1D OS=Homo sapien... 29 8.2
sp|Q4JUK5|GLGB_CORJK 1,4-alpha-glucan-branching enzyme OS=Coryne... 29 8.2
sp|Q6R005|DLG4_DANRE Disks large homolog 4 OS=Danio rerio GN=dlg... 29 8.2

>sp|Q8K9E1|SYQ_BUCAP Glutaminyl-tRNA synthetase OS=Buchnera
aphidicola subsp. Schizaphis graminum GN=glnS PE=3 SV=2
Length = 562

Score = 30.0 bits (66), Expect = 3.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = -1

Query: 363 EQLIARGLIYLEKLPKEQETSYTSFLSKIGSGYTLKRVSI 244
++LI +GL Y+++L KE+ Y LS +G + SI
Sbjct: 113 KELIQKGLAYVDELTKEEIREYRGTLSTVGKNSPYRNRSI 152


>sp|Q01883|RAG1_ORYSJ Seed allergenic protein RAG1 OS=Oryza sativa
subsp. japonica GN=RAG1 PE=1 SV=2
Length = 163

Score = 30.0 bits (66), Expect = 3.7
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 6/82 (7%)
Frame = -1

Query: 231 DDEDWT--MRGKAGASGGLPRSGYIEEYVY----PYGAPRSGQIIEECYPHPRNGKLEDY 70
D++ W R A G R G ++ + GA +G + E +P R G LE
Sbjct: 71 DEQVWQDCCRQLAAVDDGWCRCGALDHMLSGIYRELGATEAGHPMAEVFPGCRRGDLERA 130

Query: 69 RTFAFDLGSVDLCSGPGGQLPW 4
+VD+ +GPGG W
Sbjct: 131 AASLPAFCNVDIPNGPGGVCYW 152


>sp|O02822|IRK11_RABIT ATP-sensitive inward rectifier potassium
channel 11 OS=Oryctolagus cuniculus GN=KCNJ11 PE=2 SV=1
Length = 390

Score = 30.0 bits (66), Expect = 3.7
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3

Query: 159 PLCIHSLADPHLPLPFLSLSNLHHHK 236
PL IH + D + PL L+ S+LHHH+
Sbjct: 254 PLIIHHVIDANSPLYDLAPSDLHHHQ 279


>sp|P79775|ANF1_CHICK Homeobox protein ANF-1 OS=Gallus gallus PE=2
SV=2
Length = 196

Score = 30.0 bits (66), Expect = 3.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3

Query: 165 CIHSLADPHLPLPFLSLSNLHHH 233
C+H L DPHL +P +S N H
Sbjct: 60 CMHQLGDPHLQIPVVSYENSLFH 82


>sp|Q7M722|TR114_MOUSE Taste receptor type 2 member 114 OS=Mus
musculus GN=Tas2r114 PE=2 SV=1
Length = 309

Score = 29.3 bits (64), Expect = 6.3
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +1

Query: 52 IKRECAVVF*FPIPGMRIAFFNNLPAPRRSIRVDILLYVSTPWQ 183
+KR +VF F I + I++ + P + ++ + +LY++T WQ
Sbjct: 122 LKRRIDLVFFFLIGCLLISWLFSFPVVAKMVKDNKMLYINTSWQ 165


>sp|Q5XUN4|JAD1D_PANTR Histone demethylase JARID1D OS=Pan
troglodytes GN=JARID1D PE=2 SV=1
Length = 1535

Score = 28.9 bits (63), Expect = 8.2
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 16/106 (15%)
Frame = -1

Query: 342 LIYLEKLPKEQETSYTSFL-----SKIGSGYTLKRVSI*-----TFCDDEDWT-----MR 208
L YL+++ K E +S KI Y+L ++ I C D W +
Sbjct: 83 LNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLH 142

Query: 207 GKAGAS-GGLPRSGYIEEYVYPYGAPRSGQIIEECYPHPRNGKLED 73
G + G L RS Y E +YPY +SG +C HP + +++D
Sbjct: 143 YPPGKNIGSLLRSHY-ERIIYPYEMFQSGANHVQCNTHPFDNEVKD 187


>sp|Q9BY66|JAD1D_HUMAN Histone demethylase JARID1D OS=Homo sapiens
GN=JARID1D PE=1 SV=2
Length = 1539

Score = 28.9 bits (63), Expect = 8.2
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 16/106 (15%)
Frame = -1

Query: 342 LIYLEKLPKEQETSYTSFL-----SKIGSGYTLKRVSI*-----TFCDDEDWT-----MR 208
L YL+++ K E +S KI Y+L ++ I C D W +
Sbjct: 83 LNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLSKIVIEEGGYEAICKDRRWARVAQRLH 142

Query: 207 GKAGAS-GGLPRSGYIEEYVYPYGAPRSGQIIEECYPHPRNGKLED 73
G + G L RS Y E +YPY +SG +C HP + +++D
Sbjct: 143 YPPGKNIGSLLRSHY-ERIIYPYEMFQSGANHVQCNTHPFDNEVKD 187


>sp|Q4JUK5|GLGB_CORJK 1,4-alpha-glucan-branching enzyme
OS=Corynebacterium jeikeium (strain K411) GN=glgB PE=3
SV=1
Length = 711

Score = 28.9 bits (63), Expect = 8.2
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = -1

Query: 171 GYIEEYVYPYGAPRSGQII-----EECYPHP--RNGKLEDYRTFAFDLG 46
G I ++V P P+ G + E CY HP R G+ D+ T+ FD G
Sbjct: 318 GVIMDWV-PGHFPKDGWALGRFDGEACYEHPDPRRGEQPDWGTYVFDFG 365


>sp|Q6R005|DLG4_DANRE Disks large homolog 4 OS=Danio rerio GN=dlg4
PE=2 SV=1
Length = 801

Score = 28.9 bits (63), Expect = 8.2
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1

Query: 234 CDDEDWTMRGKAGASGGLPRSGYI 163
C DE+W GK G L +GYI
Sbjct: 544 CSDEEWWQAGKLAPHGELEETGYI 567


tr_hit_id Q87F13
Definition tr|Q87F13|Q87F13_XYLFT Cysteine protease OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Align length 72
Score (bit) 36.6
E-value 0.65
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919912|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_F03.
(402 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q87F13|Q87F13_XYLFT Cysteine protease OS=Xylella fastidiosa (... 37 0.65
tr|Q3R0T0|Q3R0T0_XYLFA Peptidase C1A, papain OS=Xylella fastidio... 35 2.5
tr|Q9PGZ0|Q9PGZ0_XYLFA Cysteine protease OS=Xylella fastidiosa G... 34 3.2
tr|B5GJF2|B5GJF2_9ACTO Predicted protein OS=Streptomyces sp. SPB... 33 7.2
tr|A2TY90|A2TY90_9FLAO SpoU rRNA methylase family protein OS=Pol... 33 9.1
tr|Q1LF57|Q1LF57_RALME Transcriptional regulator, LuxR family OS... 33 9.4

>tr|Q87F13|Q87F13_XYLFT Cysteine protease OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=PD_0125 PE=4 SV=1
Length = 271

Score = 36.6 bits (83), Expect = 0.65
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -1

Query: 234 CDDEDWTMRGKAGASGGLPRSGYIEEYVYPYGAPRSGQIIEECYPHPRNGKLEDYRTFAF 55
C +++W G P EE+ P GAP S + ++CY RN K+ +Y A
Sbjct: 119 CPEKEWPY-------GDTPADQKTEEF--PPGAPASKKPSDQCYKEARNYKITEYSRVAQ 169

Query: 54 DLGSVDLCSGPG 19
D+ + C G
Sbjct: 170 DIDHLKACLAAG 181


>tr|Q3R0T0|Q3R0T0_XYLFA Peptidase C1A, papain OS=Xylella fastidiosa
Ann-1 GN=XfasoDRAFT_0678 PE=4 SV=1
Length = 271

Score = 34.7 bits (78), Expect = 2.5
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -1

Query: 234 CDDEDWTMRGKAGASGGLPRSGYIEEYVYPYGAPRSGQIIEECYPHPRNGKLEDYRTFAF 55
C +++W G P EE+ P GAP S + ++CY +N K+ +Y A
Sbjct: 119 CPEKEWPY-------GDTPADPRTEEF--PPGAPASKKPSDQCYKDAQNYKITEYSRVAQ 169

Query: 54 DLGSVDLCSGPG 19
D+ + C G
Sbjct: 170 DIDHLKACLAAG 181


>tr|Q9PGZ0|Q9PGZ0_XYLFA Cysteine protease OS=Xylella fastidiosa
GN=XF_0156 PE=4 SV=1
Length = 271

Score = 34.3 bits (77), Expect = 3.2
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = -1

Query: 234 CDDEDWTMRGKAGASGGLPRSGYIEEYVYPYGAPRSGQIIEECYPHPRNGKLEDYRTFAF 55
C +++W G P EE+ P GAP S + ++CY +N K+ +Y A
Sbjct: 119 CPEKEWPY-------GDTPADPRTEEF--PPGAPASKKPSDQCYKDAQNYKITEYSRVAQ 169

Query: 54 DLGSVDLCSGPG 19
D+ + C G
Sbjct: 170 DIDHLKACLAVG 181


>tr|B5GJF2|B5GJF2_9ACTO Predicted protein OS=Streptomyces sp. SPB74
GN=SSBG_04436 PE=4 SV=1
Length = 1109

Score = 33.1 bits (74), Expect = 7.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Frame = +1

Query: 85 PIPGMRIAFFNNLPAPRRSIRVDILLYVSTPWQTPTCPCLSSHCP 219
P PG R+ P PRRS R D + + P +TPT P S+ P
Sbjct: 1063 PRPGRRMPRPRRTPRPRRSPRPDRSTFPAPPTRTPTAPRPSATSP 1107


>tr|A2TY90|A2TY90_9FLAO SpoU rRNA methylase family protein
OS=Polaribacter sp. MED152 GN=MED152_08900 PE=3 SV=1
Length = 152

Score = 32.7 bits (73), Expect = 9.1
Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +3

Query: 9 GAAHLAHYK--DLHFPNQTRMCGSLLVSHSGDEDSILQ*SARS*ALHTGRHTPLCIHSLA 182
GA HYK D F N + G++LV DE S+ L T H C++ L
Sbjct: 57 GAMPYFHYKNFDDFFDNLPK--GAMLVGVELDEKSV--------QLETFTHPKRCVYLLG 106

Query: 183 DPHLPLPFLSLSNLHHHKKFRC*LS*EYSQSRSLI 287
+P L++ HH KF+ LS + + S++
Sbjct: 107 AEDHGIPKLAIEKAHHLVKFKSELSLNVAVAGSIV 141


>tr|Q1LF57|Q1LF57_RALME Transcriptional regulator, LuxR family
OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 /
DSM 2839) GN=Rmet_4354 PE=4 SV=1
Length = 283

Score = 32.7 bits (73), Expect = 9.4
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1

Query: 94 GMRIAFFNNLPAPR-RSIRVDILLYVSTPWQTPTCPCLSSHCPI 222
G++ FF+ A +IR ++ S PW+ TCP + S CP+
Sbjct: 37 GLKAGFFSFRSASVCATIRTSTFIWGSNPWRHVTCPAVISPCPV 80