BP919916
Clone id YMU001_000130_F07
Library
Length 341
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_F07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAGGTGAACTCGTGTGGGCAGCAGGTTCAGATAAGTAAGTGTATAGCTACACAAAGCAGC
AATGGCAGTTTAGGTCCTGGAAGACCTTCAAATAGCACTCTGGAAAGCAGAGAAAGTCTT
TAGGAATGGGTCTCTAGCTTATGAACATGTAAAAAAGGCAGAAGAGGAGTCCGGAACTTA
TGTACAGAATCTCTCCACTCTTGATTATAAAACATGTGGGGCCATCAGAAGGCAGATTGC
GATAGAAGATCAACATGCTGTGCGTGCAAAGAAATATCGGGATATGCAACCATCAAGTAG
TCCAGAATTGTCTAAGACTGGTTTCCTGAGTGCAAGGTTAC
■■Homology search results ■■ -
sp_hit_id Q5ZK82
Definition sp|Q5ZK82|MPPE1_CHICK Metallophosphoesterase 1 OS=Gallus gallus
Align length 37
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919916|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_F07.
(341 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5ZK82|MPPE1_CHICK Metallophosphoesterase 1 OS=Gallus gallus ... 30 3.7
sp|P38661|PDIA6_MEDSA Probable protein disulfide-isomerase A6 OS... 30 4.9
sp|O22263|PDIA6_ARATH Probable protein disulfide-isomerase A6 OS... 30 4.9
sp|P16905|KAPR1_DROME cAMP-dependent protein kinase type I regul... 29 6.4
sp|A1R1C5|URE1_ARTAT Urease subunit alpha OS=Arthrobacter auresc... 29 8.3

>sp|Q5ZK82|MPPE1_CHICK Metallophosphoesterase 1 OS=Gallus gallus
GN=MPPE1 PE=2 SV=1
Length = 398

Score = 30.0 bits (66), Expect = 3.7
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2

Query: 253 LIFYRNLPSDGPTCFIIKSGEILYISSGLLFCLFYMF 143
L +NLP CF++K + ++SS L+FC F+++
Sbjct: 6 LTIVKNLPLKKRICFLLKL--VCFVSSVLIFCEFFIY 40


>sp|P38661|PDIA6_MEDSA Probable protein disulfide-isomerase A6
OS=Medicago sativa PE=2 SV=1
Length = 364

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1

Query: 229 KADCDRRSTCCACKEISGYATIK*SRIV*DWFPE 330
K DCD + C+ +SGY TI+ WFP+
Sbjct: 85 KVDCDEHKSVCSKYGVSGYPTIQ-------WFPK 111


>sp|O22263|PDIA6_ARATH Probable protein disulfide-isomerase A6
OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1
Length = 361

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1

Query: 229 KADCDRRSTCCACKEISGYATIK*SRIV*DWFPE 330
K DCD + + C +SGY TI+ WFP+
Sbjct: 79 KVDCDEQKSVCTKYGVSGYPTIQ-------WFPK 105


>sp|P16905|KAPR1_DROME cAMP-dependent protein kinase type I
regulatory subunit OS=Drosophila melanogaster GN=Pka-R1
PE=1 SV=2
Length = 376

Score = 29.3 bits (64), Expect = 6.4
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2

Query: 107 AEKVFRNGSLAYEHVKKAEEESGTYVQNLSTLDYKTCGAIRRQIA 241
A V R G ++ E V EE++ YV+ + DYKT A+ + IA
Sbjct: 86 APPVRRRGGISAEPV--TEEDATNYVKKVVPKDYKTMNALSKAIA 128


>sp|A1R1C5|URE1_ARTAT Urease subunit alpha OS=Arthrobacter aurescens
(strain TC1) GN=ureC PE=3 SV=1
Length = 576

Score = 28.9 bits (63), Expect = 8.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +2

Query: 113 KVFRNGSLAYEHVKKAEEESGTYVQNLSTLDYKTCGAIRRQIAIEDQHAVRAKK 274
KV R+G + +AE+ T + N+ LDY G + IA++D H + K
Sbjct: 50 KVIRDGMGQNGQLTRAEDIPDTVITNVIVLDY--TGIYKADIALKDGHIFKIGK 101


tr_hit_id B1L1U7
Definition tr|B1L1U7|B1L1U7_CLOBM Transcriptional regulator, AraC family OS=Clostridium botulinum (strain Loch Maree / Type A3)
Align length 87
Score (bit) 38.9
E-value 0.13
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919916|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_F07.
(341 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B1L1U7|B1L1U7_CLOBM Transcriptional regulator, AraC family OS... 39 0.13
tr|B1QD50|B1QD50_CLOBO Transcriptional regulator, AraC family OS... 38 0.22
tr|B1ILD5|B1ILD5_CLOBK Transcriptional regulator, AraC family OS... 38 0.29
tr|A7GDS9|A7GDS9_CLOBL Transcriptional regulator, AraC family OS... 38 0.29
tr|A7FUA7|A7FUA7_CLOB1 Transcriptional regulator, AraC family OS... 38 0.29
tr|A5I271|A5I271_CLOBH AraC-family transcriptional regulator OS=... 38 0.29
tr|A9SZZ8|A9SZZ8_PHYPA Sensory histidine protein kinase OS=Physc... 37 0.64
tr|Q8T1B3|Q8T1B3_DICDI Similar to Arabidopsis thaliana (Mouse-ea... 35 2.4
tr|Q553M5|Q553M5_DICDI Pleckstrin homology (PH) domain-containin... 35 2.4
tr|Q091V9|Q091V9_STIAU Mate efflux family protein OS=Stigmatella... 33 5.5

>tr|B1L1U7|B1L1U7_CLOBM Transcriptional regulator, AraC family
OS=Clostridium botulinum (strain Loch Maree / Type A3)
GN=CLK_1061 PE=4 SV=1
Length = 329

Score = 38.9 bits (89), Expect = 0.13
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 7/87 (8%)
Frame = +2

Query: 80 EDLQIALWKAEKVFRN--GSLAYEHVKKAEEESGTYV---QNLSTLDYKTCGAIRRQIAI 244
+DL I+L+K +K F+N G+ YE++KK++ E Y+ N+S L+ I +I
Sbjct: 248 DDLNISLYKLQKAFKNSTGNTVYEYIKKSKIEKAKYLLKNTNMSILE------IANEIGY 301

Query: 245 ED--QHAVRAKKYRDMQPSSSPELSKT 319
E+ + + K Y +M P +L+K+
Sbjct: 302 ENPSKFSNAFKGYNNMNPLKYRKLNKS 328


>tr|B1QD50|B1QD50_CLOBO Transcriptional regulator, AraC family
OS=Clostridium botulinum NCTC 2916 GN=CBN_1740 PE=4 SV=1
Length = 329

Score = 38.1 bits (87), Expect = 0.22
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Frame = +2

Query: 83 DLQIALWKAEKVFRN--GSLAYEHVKKAEEESGTYV---QNLSTLDYKTCGAIRRQIAIE 247
DL I+L+K +K F+N G+ YE++KK++ E Y+ N+S L+ I +I E
Sbjct: 249 DLNISLYKLQKAFKNVTGNTVYEYIKKSKIEKAKYLLKNTNMSILE------IANEIGYE 302

Query: 248 D--QHAVRAKKYRDMQPSSSPELSKT 319
+ + + K Y +M P +L+K+
Sbjct: 303 NPSKFSNAFKGYNNMNPLKYRKLNKS 328


>tr|B1ILD5|B1ILD5_CLOBK Transcriptional regulator, AraC family
OS=Clostridium botulinum (strain Okra / Type B1)
GN=CLD_2955 PE=4 SV=1
Length = 329

Score = 37.7 bits (86), Expect = 0.29
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Frame = +2

Query: 83 DLQIALWKAEKVFRN--GSLAYEHVKKAEEESGTYV---QNLSTLDYKTCGAIRRQIAIE 247
DL I+L+K +K F+N G+ YE++KK+ E Y+ N+S L+ I +I E
Sbjct: 249 DLNISLYKLQKAFKNSTGNTVYEYIKKSRIEKAKYLLKNTNMSILE------IANEIGYE 302

Query: 248 D--QHAVRAKKYRDMQPSSSPELSKT 319
+ + + K Y +M P +L+K+
Sbjct: 303 NPSKFSNAFKGYNNMNPLKYRKLNKS 328


>tr|A7GDS9|A7GDS9_CLOBL Transcriptional regulator, AraC family
OS=Clostridium botulinum (strain Langeland / NCTC 10281
/ Type F) GN=CLI_1679 PE=4 SV=1
Length = 329

Score = 37.7 bits (86), Expect = 0.29
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Frame = +2

Query: 83 DLQIALWKAEKVFRN--GSLAYEHVKKAEEESGTYV---QNLSTLDYKTCGAIRRQIAIE 247
DL I+L+K +K F+N G+ YE++KK+ E Y+ N+S L+ I +I E
Sbjct: 249 DLNISLYKLQKAFKNSTGNTVYEYIKKSRIEKAKYLLKNTNMSILE------IANEIGYE 302

Query: 248 D--QHAVRAKKYRDMQPSSSPELSKT 319
+ + + K Y +M P +L+K+
Sbjct: 303 NPSKFSNAFKGYNNMNPLKYRKLNKS 328


>tr|A7FUA7|A7FUA7_CLOB1 Transcriptional regulator, AraC family
OS=Clostridium botulinum (strain ATCC 19397 / Type A)
GN=CLB_1618 PE=4 SV=1
Length = 329

Score = 37.7 bits (86), Expect = 0.29
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Frame = +2

Query: 83 DLQIALWKAEKVFRN--GSLAYEHVKKAEEESGTYV---QNLSTLDYKTCGAIRRQIAIE 247
DL I+L+K +K F+N G+ YE++KK+ E Y+ N+S L+ I +I E
Sbjct: 249 DLNISLYKLQKAFKNSTGNTVYEYIKKSRIEKAKYLLKNTNMSILE------IANEIGYE 302

Query: 248 D--QHAVRAKKYRDMQPSSSPELSKT 319
+ + + K Y +M P +L+K+
Sbjct: 303 NPSKFSNAFKGYNNMNPLKYRKLNKS 328


>tr|A5I271|A5I271_CLOBH AraC-family transcriptional regulator
OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC
13319 / Type A) GN=CBO1598 PE=4 SV=1
Length = 329

Score = 37.7 bits (86), Expect = 0.29
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Frame = +2

Query: 83 DLQIALWKAEKVFRN--GSLAYEHVKKAEEESGTYV---QNLSTLDYKTCGAIRRQIAIE 247
DL I+L+K +K F+N G+ YE++KK+ E Y+ N+S L+ I +I E
Sbjct: 249 DLNISLYKLQKAFKNSTGNTVYEYIKKSRIEKAKYLLKNTNMSILE------IANEIGYE 302

Query: 248 D--QHAVRAKKYRDMQPSSSPELSKT 319
+ + + K Y +M P +L+K+
Sbjct: 303 NPSKFSNAFKGYNNMNPLKYRKLNKS 328


>tr|A9SZZ8|A9SZZ8_PHYPA Sensory histidine protein kinase
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_167371 PE=4 SV=1
Length = 1040

Score = 36.6 bits (83), Expect = 0.64
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Frame = -2

Query: 337 PCTQETSLRQFWTT*WLHIPIF------LCTHSMLIFYRNLPSDGPTCFIIKSGEILYIS 176
P Q +S ++W T WL I LCTH + YR + C +++ ++ ++
Sbjct: 258 PLIQWSSFWRYWATWWLGILATMITVTPLCTHLLAWEYRTHLKN--PCKLLECALVIMVT 315

Query: 175 SGLLFCLFYMFI-S*RPIPKDFLCFP 101
S ++ +F++ + RP+P +LCFP
Sbjct: 316 SAVMVIVFFLNLEDFRPLP--YLCFP 339


>tr|Q8T1B3|Q8T1B3_DICDI Similar to Arabidopsis thaliana (Mouse-ear
cress). Putative GTPase activating protein
OS=Dictyostelium discoideum PE=4 SV=2
Length = 545

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1

Query: 1 KVNSCGQQVQISKCIATQSSNGSLGPGRPSNSTLES 108
KV S G ++K + NGSL PG PS+ST +S
Sbjct: 189 KVGSNGGSPSVNKMLTPNKINGSLAPGSPSSSTFDS 224


>tr|Q553M5|Q553M5_DICDI Pleckstrin homology (PH) domain-containing
protein OS=Dictyostelium discoideum GN=DDB_0217683 PE=4
SV=2
Length = 545

Score = 34.7 bits (78), Expect = 2.4
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1

Query: 1 KVNSCGQQVQISKCIATQSSNGSLGPGRPSNSTLES 108
KV S G ++K + NGSL PG PS+ST +S
Sbjct: 189 KVGSNGGSPSVNKMLTPNKINGSLAPGSPSSSTFDS 224


>tr|Q091V9|Q091V9_STIAU Mate efflux family protein OS=Stigmatella
aurantiaca DW4/3-1 GN=STIAU_2519 PE=4 SV=1
Length = 455

Score = 33.5 bits (75), Expect = 5.5
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = -2

Query: 271 LCTHSMLIFYRNLPSDGPTCFIIKSGEILYISSGLLFCLFYMFIS*RPIPKDFLCFPECY 92
LC ++++ + +P G T + +G + G+ L Y + R P+DF+ FP Y
Sbjct: 172 LCNYALIFGHFGMPEMGVTGAAVSTGLSRAAALGVFAWLLYRVMDVRMAPRDFVAFPGEY 231

Query: 91 LK 86
++
Sbjct: 232 IR 233