BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919917|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_F08.
         (438 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O60156|SEN34_SCHPO Probable tRNA-splicing endonuclease subuni...    32   0.88 
sp|P52661|GBPR_AZOBR HTH-type transcriptional regulator gbpR OS=...    29   9.8  

>sp|O60156|SEN34_SCHPO Probable tRNA-splicing endonuclease subunit
           sen34 OS=Schizosaccharomyces pombe GN=sen34 PE=2 SV=1
          Length = 284

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 14/97 (14%)
 Frame = -1

Query: 402 DRMTKWLRRNQSLPPEG-----RKEN--RLTELTRVGRDLTCDKIP-------DLKWVVK 265
           D + + L++ QSL  +      +KEN  ++  + ++GR L  D +        DL W+  
Sbjct: 89  DDVKQCLKKRQSLAYDQMIAAKKKENEKKIEIMKKLGRTLPLDPLNYDEHDSFDLSWIPV 148

Query: 264 DAATARSSQNEGIDPASQQVQNVLTKIEIARFLTSKA 154
           D  T R ++   ++    + ++V   ++I R+L  K+
Sbjct: 149 DTVTTRIAEKSSMNDDFHKEEDVFENLDINRYLMFKS 185


>sp|P52661|GBPR_AZOBR HTH-type transcriptional regulator gbpR
           OS=Azospirillum brasilense GN=gbpR PE=1 SV=1
          Length = 342

 Score = 28.9 bits (63), Expect = 9.8
 Identities = 20/96 (20%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
 Frame = -1

Query: 327 LTRVGRDLTCDKIPDLKWVVKDAATARSS------QNEGIDPASQQVQNVLTKIEIARFL 166
           L R+GR LT   + D  W+++   +   S      + EG+ P  + +++    I +A   
Sbjct: 192 LLRLGRPLTAADLVDATWILQPLGSLLRSRVEALFRAEGVPPPRKVIESASPVISLAMVA 251

Query: 165 TSKAKTL*AKN-----------SIIPYHESHLLRSY 91
            + + T+ A+            +I+P+H+   +  Y
Sbjct: 252 ENDSVTVFARALAQVFSPTGSCTIVPFHKRFSVEPY 287

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP919917|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_F08.
         (438 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q82CI0|Q82CI0_STRAW Putative uncharacterized protein OS=Strep...    33   9.2  

>tr|Q82CI0|Q82CI0_STRAW Putative uncharacterized protein
           OS=Streptomyces avermitilis GN=SAV5369 PE=4 SV=1
          Length = 231

 Score = 32.7 bits (73), Expect = 9.2
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -1

Query: 396 MTKWLRRNQSLPPEGRKENRLTELTRVGRDLTCDKIPDLKWVVKDAATARS 244
           ++++  R Q LPPEGR      EL R+GR++    + D +  V+ A  A+S
Sbjct: 132 VSEFRSRTQQLPPEGRTR---AELDRIGREIWSRTLGDTRLPVRAAHAAQS 179