BP919920
Clone id YMU001_000130_F11
Library
Length 414
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCAAAACAAGAGTAGAAAGAGTAAGGGGCTGGAATATGGGGGCAAAGACAAAAGTATAGG
AACAAAAAATTGGGAAGAAGGGGAAAACCAGGTCTGTCTAGTCCACTAGACTTCTATGTG
ACTCGCATACATGATTGCATGGCACGGTGTGGGCGAGACCGGGCCGCAAACAGAAGAAGC
CAGCATTTCCAATTGAACGGGGTGTCGGACAGTGGAGACAAGCACAATCAAAATGCTGCC
GATGTGAAGCTGGCTGACCATGTCATGCATTGCCGATTGCACTAATGATTACAAAAGCAT
TGAAAACATACATCTGCTGACACTATGGGGTGATCCTGGATGGGGTTGATGGCTCAGTGG
GAGTAGCTCTTCGAGGGGTATGGCCACCGGATTCCTTGGACTTATCCGACGAGG
■■Homology search results ■■ -
sp_hit_id Q62671
Definition sp|Q62671|UBR5_RAT E3 ubiquitin-protein ligase UBR5 (Fragment) OS=Rattus norvegicus
Align length 32
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919920|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_F11.
(414 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q62671|UBR5_RAT E3 ubiquitin-protein ligase UBR5 (Fragment) O... 32 1.3
sp|Q80TP3|UBR5_MOUSE E3 ubiquitin-protein ligase UBR5 OS=Mus mus... 32 1.3
sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sa... 32 1.3
sp|Q58274|HDRC2_METJA CoB--CoM heterodisulfide reductase iron-su... 31 1.7
sp|Q2A069|GLYC_MOBVC Pre-glycoprotein polyprotein GP complex OS=... 31 2.2
sp|P77173|ZIPA_ECOLI Cell division protein zipA OS=Escherichia c... 30 3.8
sp|B1IX59|ZIPA_ECOLC Cell division protein zipA homolog OS=Esche... 30 3.8
sp|P31030|SPYA_RABIT Serine--pyruvate aminotransferase OS=Orycto... 30 4.9
sp|Q8NGF6|O10W1_HUMAN Olfactory receptor 10W1 OS=Homo sapiens GN... 30 4.9
sp|Q5U2X5|ACK1_RAT Activated CDC42 kinase 1 OS=Rattus norvegicus... 29 8.4
sp|O54967|ACK1_MOUSE Activated CDC42 kinase 1 OS=Mus musculus GN... 29 8.4
sp|Q8NGY9|OR2L8_HUMAN Olfactory receptor 2L8 OS=Homo sapiens GN=... 29 8.4
sp|P20020|AT2B1_HUMAN Plasma membrane calcium-transporting ATPas... 29 8.4

>sp|Q62671|UBR5_RAT E3 ubiquitin-protein ligase UBR5 (Fragment)
OS=Rattus norvegicus GN=Ubr5 PE=2 SV=2
Length = 920

Score = 31.6 bits (70), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1

Query: 399 PRNPVAIPLEELLPLSHQPHPGSPHSVSRCMF 304
P NP +PL E +PL+ QPH P++ +F
Sbjct: 158 PPNPFEVPLAEAIPLADQPHLLQPNARKEDLF 189


>sp|Q80TP3|UBR5_MOUSE E3 ubiquitin-protein ligase UBR5 OS=Mus musculus
GN=Ubr5 PE=1 SV=2
Length = 2792

Score = 31.6 bits (70), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1

Query: 399 PRNPVAIPLEELLPLSHQPHPGSPHSVSRCMF 304
P NP +PL E +PL+ QPH P++ +F
Sbjct: 2030 PPNPFEVPLAEAIPLADQPHLLQPNARKEDLF 2061


>sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens
GN=UBR5 PE=1 SV=2
Length = 2799

Score = 31.6 bits (70), Expect = 1.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1

Query: 399 PRNPVAIPLEELLPLSHQPHPGSPHSVSRCMF 304
P NP +PL E +PL+ QPH P++ +F
Sbjct: 2036 PPNPFEVPLAEAIPLADQPHLLQPNARKEDLF 2067


>sp|Q58274|HDRC2_METJA CoB--CoM heterodisulfide reductase
iron-sulfur subunit C 2 OS=Methanocaldococcus jannaschii
GN=hdrC2 PE=3 SV=1
Length = 186

Score = 31.2 bits (69), Expect = 1.7
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +1

Query: 40 GQRQKYRNKKLGRRGKPGLSSPLD----FYVTRIHDCMARCGRD 159
G+R YR +K+ R+ GL LD +Y T + C RC RD
Sbjct: 49 GRRTAYRTRKVLRKVLLGLDDVLDSDDIWYCTTCYTCYERCPRD 92


>sp|Q2A069|GLYC_MOBVC Pre-glycoprotein polyprotein GP complex
OS=Mobala virus (isolate Rat/Central African
Republic/Acar 3080/1983) GN=GPC PE=1 SV=1
Length = 491

Score = 30.8 bits (68), Expect = 2.2
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -3

Query: 220 CLHCPTPRSIGNAGFFCLRPGLAHTVPCNHVCESH 116
C HC TP AGF C+R + + N E H
Sbjct: 196 CTHCDTPLGASIAGFNCVRTSYKYLIIQNTTWEDH 230


>sp|P77173|ZIPA_ECOLI Cell division protein zipA OS=Escherichia coli
(strain K12) GN=zipA PE=1 SV=3
Length = 328

Score = 30.0 bits (66), Expect = 3.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1

Query: 399 PRNPVAIPLEELLPLSHQPHPGSP 328
PR PV P E +P H PHP P
Sbjct: 101 PRQPVQQPPEAQVPPQHAPHPAQP 124


>sp|B1IX59|ZIPA_ECOLC Cell division protein zipA homolog
OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=zipA PE=3 SV=1
Length = 328

Score = 30.0 bits (66), Expect = 3.8
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -1

Query: 399 PRNPVAIPLEELLPLSHQPHPGSP 328
PR PV P E +P H PHP P
Sbjct: 101 PRQPVQQPPEAQVPPQHAPHPAQP 124


>sp|P31030|SPYA_RABIT Serine--pyruvate aminotransferase
OS=Oryctolagus cuniculus GN=AGXT PE=2 SV=1
Length = 392

Score = 29.6 bits (65), Expect = 4.9
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1

Query: 31 GIWGQRQKYRNKKLGRRGKPGLSSPLDFY-VTRIHDCMAR 147
GIWGQR +++G R P + P Y + + +C+A+
Sbjct: 106 GIWGQRAAEVGERIGARVHPMIKDPGSHYTLQEVEECLAQ 145


>sp|Q8NGF6|O10W1_HUMAN Olfactory receptor 10W1 OS=Homo sapiens
GN=OR10W1 PE=2 SV=1
Length = 305

Score = 29.6 bits (65), Expect = 4.9
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -3

Query: 208 PTPRSIGNAGFFCLRPGLAHTVPC-NHVCESHRSLVD*TDLVFPFFPIFCSYTFVFAPIF 32
P ++ G FFC P + H V +H+ E + + PFF I SYTF+ A +
Sbjct: 158 PFCQAQGIEHFFCDVPPVMHVVCAQSHIHEQSVLVAAILAIAVPFFLITTSYTFIVAALL 217

Query: 31 Q 29
+
Sbjct: 218 K 218


>sp|Q5U2X5|ACK1_RAT Activated CDC42 kinase 1 OS=Rattus norvegicus
GN=Tnk2 PE=2 SV=1
Length = 1040

Score = 28.9 bits (63), Expect = 8.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -1

Query: 402 SPRNPVAIPLEELLPLSHQPHPGSPHSVSRCM 307
SP P A+P+ LLP P P +P + R M
Sbjct: 881 SPEEPAALPVPPLLPPPSTPAPAAPTATVRPM 912


tr_hit_id B8LN40
Definition tr|B8LN40|B8LN40_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 29
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919920|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_F11.
(414 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LN40|B8LN40_PICSI Putative uncharacterized protein OS=Picea... 36 1.1
tr|Q08R92|Q08R92_STIAU Putative uncharacterized protein OS=Stigm... 35 2.4
tr|B3ITK3|B3ITK3_MONDO Olfactory receptor (Fragment) OS=Monodelp... 34 3.2
tr|B6MBB3|B6MBB3_BRAFL Putative uncharacterized protein OS=Branc... 34 4.1
tr|B7FXC7|B7FXC7_PHATR Predicted protein OS=Phaeodactylum tricor... 33 5.4
tr|B3M760|B3M760_DROAN GF24931 (Fragment) OS=Drosophila ananassa... 33 7.1
tr|Q6C3M1|Q6C3M1_YARLI YALI0E33671p OS=Yarrowia lipolytica GN=YA... 33 9.3

>tr|B8LN40|B8LN40_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 340

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -3

Query: 412 SSDKSKESGGHTPRRATPTEPSTPSRITP 326
S DKSKES G TP + E TPS ITP
Sbjct: 312 SDDKSKESNGQTPPQQATPEARTPSAITP 340


>tr|Q08R92|Q08R92_STIAU Putative uncharacterized protein
OS=Stigmatella aurantiaca DW4/3-1 GN=STIAU_7684 PE=4
SV=1
Length = 406

Score = 34.7 bits (78), Expect = 2.4
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = -1

Query: 411 RRISPRNPVAIPLEELLPLSHQPHPGSPHSVSRCMFSMLL*SLVQSAMHDMVSQLHIGSI 232
R + P +A PL L H PHP +P + L +V + +V+ LH
Sbjct: 136 RPLRPLQHLAEPLPAHLLRGHSPHPSNPTDPVDGHGAQSLSDVVDGGLRRIVADLHDVGD 195

Query: 231 LIVLVSTVRHPV-QLEML 181
+VL + + HPV +LE+L
Sbjct: 196 GVVLAALLLHPVLELEVL 213


>tr|B3ITK3|B3ITK3_MONDO Olfactory receptor (Fragment) OS=Monodelphis
domestica GN=opor103 PE=4 SV=1
Length = 216

Score = 34.3 bits (77), Expect = 3.2
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = -3

Query: 178 FFCLRPGLAHTVPCN--HVCESHRSLVD*TDLVFPFFPIFCSYTFVFAPIFQ 29
FFC P L + C+ H+ ES ++ + +FPFF IF SY F+F I +
Sbjct: 110 FFCDIPPLL-VLSCSEIHIIESIIFILGSFNAIFPFFVIFTSYLFIFITILK 160


>tr|B6MBB3|B6MBB3_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_80359 PE=4 SV=1
Length = 995

Score = 33.9 bits (76), Expect = 4.1
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Frame = +1

Query: 43 QRQKYRNKKLGRRGKPGLSSPLDFYVTRIHDCMARCGRDRAANRRSQHFQ-----LNGVS 207
Q KY+ K R+G L P D + HD A G A RR +H + L G +
Sbjct: 35 QNPKYKGGKHDRKGAGRLQGPAD--IGTRHDRTAAGGLQGPAVRRPRHNRSAIESLQGPA 92

Query: 208 DSGDKHNQNAA 240
D G +H++ AA
Sbjct: 93 DRGPRHDRTAA 103


>tr|B7FXC7|B7FXC7_PHATR Predicted protein OS=Phaeodactylum
tricornutum CCAP 1055/1 GN=PHATRDRAFT_45342 PE=4 SV=1
Length = 1366

Score = 33.5 bits (75), Expect = 5.4
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -3

Query: 280 AIGNA*HGQPASHRQHFDCACLHCPTPRSIGNAGFFCLRPGLAHTVPCNH 131
AIG++ +PA +PR +GNA C+R +AHTVP H
Sbjct: 392 AIGSSLKSEPAKSLLQMSLGT----SPRPVGNAADLCVRAHVAHTVPETH 437


>tr|B3M760|B3M760_DROAN GF24931 (Fragment) OS=Drosophila ananassae
GN=GF24931 PE=4 SV=1
Length = 315

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1

Query: 127 IHDCMARCGRDRAANRRSQHFQLNGVSDSGDKHNQNAADVKLADHVMH 270
I C+A GR + + F LN + + DK + ++ +KLADH++H
Sbjct: 144 IEKCLAEEGRQVDSAQEPPSFTLNQLRVALDKGSNHSVPLKLADHMLH 191


>tr|Q6C3M1|Q6C3M1_YARLI YALI0E33671p OS=Yarrowia lipolytica
GN=YALI0E33671g PE=3 SV=1
Length = 500

Score = 32.7 bits (73), Expect = 9.3
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3

Query: 250 ASHRQHFDCACLHCPTPRSIGNAGFFCLRPGLAHTVPCNH 131
A H Q ++ + C TPR +GN +F + + HT P H
Sbjct: 325 ADHPQSWNEKIVMCGTPREVGNHSYFSINNRIGHTSPEIH 364