BP919922 |
Clone id |
YMU001_000130_G01 |
Library |
YMU01 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000130_G01. |
Accession |
BP919922 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTGGATTTTGTGCTTTTGCTTTTGTTTTCGTGGAATCTACCTCTAGAAAATTGATTTTTT TTTTGAGAGGTGAAACTTTTTTTATTCTTCTTGCGGTTGCGTTTGTAGAGGGACTTCTGA GAAGGAAAGCTACGAGCCCTGCGATAACTACAGCATACCCACCCTTAATTGAATTGAAAA TCAACCCTTTGACCTTGTTACGGTCACGCCAAATCTTAGTTGGTTCAATCCAAACTATTT TCTTGTTCAATGGTTTTGACAAAATAATTCCCGGTTTACGCGGCTTTGGCAAAAGAAGTC TTGGTTCATAAAAACGAAGCTCCTTTACTTCTACTTTTTCTAGATTCAAATCTTCGATTC CAACAAAATTATACCTTGCTTGTTCAGTAATTGACACCTCTGCTATCACTTCATGTTTTA AAAGGATTACAGGAGTTTTCAGTCCTGTATTCACCAAGATCATATTTGATGATCGTAACA GTTTGATTAAACCCTTGTCCCTATCATGCCTTTTATTTCCGTATCGCAATGGCTTTACTG AATATTGTAGAGCGCCTTCACGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P26863 |
Definition |
sp|P26863|RT01_MARPO Ribosomal protein S1, mitochondrial OS=Marchantia polymorpha |
Align length |
152 |
Score (bit) |
97.4 |
E-value |
4.0e-20 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919922|Adiantum capillus-veneris mRNA, clone: YMU001_000130_G01. (563 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P26863|RT01_MARPO Ribosomal protein S1, mitochondrial OS=Marc... 97 4e-20 sp|Q6NDP1|RS1_RHOPA 30S ribosomal protein S1 OS=Rhodopseudomonas... 44 5e-04 sp|P14129|RS1_RHIME 30S ribosomal protein S1 OS=Rhizobium melilo... 40 0.006 sp|Q68WL4|RS1_RICTY 30S ribosomal protein S1 OS=Rickettsia typhi... 39 0.014 sp|Q4ULF1|RS1_RICFE 30S ribosomal protein S1 OS=Rickettsia felis... 39 0.014 sp|Q9ZD28|RS1_RICPR 30S ribosomal protein S1 OS=Rickettsia prowa... 38 0.030 sp|Q92HM4|RS1_RICCN 30S ribosomal protein S1 OS=Rickettsia conor... 38 0.030 sp|Q48082|RS1_HAEIN 30S ribosomal protein S1 OS=Haemophilus infl... 36 0.11 sp|Q1RJH1|RS1_RICBR 30S ribosomal protein S1 OS=Rickettsia belli... 36 0.15 sp|P0AG70|RS1_SHIFL 30S ribosomal protein S1 OS=Shigella flexner... 34 0.57 sp|P0AG67|RS1_ECOLI 30S ribosomal protein S1 OS=Escherichia coli... 34 0.57 sp|P0AG68|RS1_ECOL6 30S ribosomal protein S1 OS=Escherichia coli... 34 0.57 sp|P0AG69|RS1_ECO57 30S ribosomal protein S1 OS=Escherichia coli... 34 0.57 sp|Q89AJ3|RS1_BUCBP 30S ribosomal protein S1 OS=Buchnera aphidic... 32 2.8 sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=S... 32 2.8 sp|Q83E09|RS1_COXBU 30S ribosomal protein S1 OS=Coxiella burneti... 31 4.8 sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria mening... 30 6.3 sp|Q9HZ71|RS1_PSEAE 30S ribosomal protein S1 OS=Pseudomonas aeru... 30 8.2 sp|Q895G2|ISPH_CLOTE 4-hydroxy-3-methylbut-2-enyl diphosphate re... 30 8.2 sp|P45443|DYHC_NEUCR Dynein heavy chain, cytoplasmic OS=Neurospo... 30 8.2
>sp|P26863|RT01_MARPO Ribosomal protein S1, mitochondrial OS=Marchantia polymorpha GN=RPS1 PE=3 SV=2 Length = 270
Score = 97.4 bits (241), Expect = 4e-20 Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 9/152 (5%) Frame = -2
Query: 466 NMILVNTGLKTPVILLKHEVIAEVSITEQARYNFVGIEDLNLEKVEVKELRFYEXXXXXX 287 N +LV+TGLKTP+I +HE + V IT+QAR++F GIED+ + F E Sbjct: 32 NKVLVDTGLKTPIICFQHE-LKRVPITKQARFHF-GIEDVEV---------FGEPK---- 76
Query: 286 XXXXPGIILSKPLN----KKIVWIEPTKIWR-DRNKVKGLIFNSIKGGYAVVIAGLVAF- 125 ++L KPL +K+VWIE TKIWR D+N VKG I NS+KGGYAV IAG +AF Sbjct: 77 ------MLLPKPLEIKCKRKLVWIELTKIWRSDQNLVKGFILNSVKGGYAVAIAGYIAFL 130
Query: 124 ---LLRSPSTNATARRIKKVSPLKKKINFLEV 38 LLRS + RI + +K KI+ + V Sbjct: 131 PKSLLRSRKVFYSQWRIFSILNMKPKISNIVV 162
>sp|Q6NDP1|RS1_RHOPA 30S ribosomal protein S1 OS=Rhodopseudomonas palustris GN=rpsA PE=1 SV=1 Length = 565
Score = 43.9 bits (102), Expect = 5e-04 Identities = 23/56 (41%), Positives = 34/56 (60%) Frame = -2
Query: 232 WIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPL 65 W + K +++ KV G+IFN +KGG+ V + G VAFL P + R I+ V+PL Sbjct: 104 WGKLEKAFQNNEKVFGVIFNQVKGGFTVDLDGAVAFL---PRSQVDIRPIRDVAPL 156
>sp|P14129|RS1_RHIME 30S ribosomal protein S1 OS=Rhizobium meliloti GN=rpsA PE=3 SV=2 Length = 568
Score = 40.4 bits (93), Expect = 0.006 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = -2
Query: 196 KVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPL 65 +V+G+IFN +KGG+ V + G VAFL P + R I+ V+PL Sbjct: 113 RVEGIIFNQVKGGFTVDLDGAVAFL---PRSQVDIRPIRDVTPL 153
>sp|Q68WL4|RS1_RICTY 30S ribosomal protein S1 OS=Rickettsia typhi GN=rpsA PE=3 SV=1 Length = 568
Score = 39.3 bits (90), Expect = 0.014 Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 6/173 (3%) Frame = -2
Query: 535 KPLRYGNKRHDRDKGLIK---LLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARYNF 365 K L+ + H ++K ++K + ++MI+V+ GLK + K E ++ + + Sbjct: 26 KMLKTVDTSHIKEKTVVKGQVIEIKNDMIIVDVGLKNEGRIPKSEFLSLPEVGD------ 79
Query: 364 VGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKG 185 + ++ +EK+E + R I+ + K+ +W + + V G Sbjct: 80 --VVEVFIEKIEGRNGRT--------------ILSREKAVKEELWGQLEIMCSKGEFVDG 123
Query: 184 LIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIK---KVSPLKKKINFLEVD 35 IF +KGG+ V ++G+VAFL P + R IK + +K+ L +D Sbjct: 124 TIFGRVKGGFTVDLSGVVAFL---PGSQVDVRPIKDPTSIMNIKQPFKILSMD 173
>sp|Q4ULF1|RS1_RICFE 30S ribosomal protein S1 OS=Rickettsia felis GN=rpsA PE=3 SV=1 Length = 568
Score = 39.3 bits (90), Expect = 0.014 Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Frame = -2
Query: 535 KPLRYGNKRHDRDKGLIK---LLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARYNF 365 K L + H ++K ++K + ++M++V+ GLK + K E +A + + Sbjct: 26 KMLETVDTSHIKEKTVVKGQVIEIKNDMVIVDVGLKNEGRIPKSEFLALPEVGD------ 79
Query: 364 VGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKG 185 + ++ +EK+E + R I+ + K+ +W + + V G Sbjct: 80 --VVEVFIEKIEGRNGRT--------------ILSREKAVKEELWGQLEIMCSKGEFVDG 123
Query: 184 LIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIK---KVSPLKKKINFLEVD 35 IF +KGG+ V ++G+VAFL P + R IK + +K+ L +D Sbjct: 124 TIFGRVKGGFTVDLSGVVAFL---PGSQVDVRPIKDPTSIMNIKQPFKILSMD 173
>sp|Q9ZD28|RS1_RICPR 30S ribosomal protein S1 OS=Rickettsia prowazekii GN=rpsA PE=3 SV=1 Length = 568
Score = 38.1 bits (87), Expect = 0.030 Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 6/164 (3%) Frame = -2
Query: 508 HDRDKGLIK---LLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARYNFVGIEDLNLE 338 H ++K ++K + ++MI+V+ GLK + K E ++ + + + ++ +E Sbjct: 35 HIKEKTVVKGQVIEIKNDMIIVDVGLKNEGRIPKSEFLSLPEVGD--------VVEVFIE 86
Query: 337 KVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFNSIKGG 158 K+E + R I+ + K+ +W + + V G IF +KGG Sbjct: 87 KIEGRNGRT--------------ILSREKAVKEELWGQLEIMCSKGEFVDGTIFGRVKGG 132
Query: 157 YAVVIAGLVAFLLRSPSTNATARRIK---KVSPLKKKINFLEVD 35 + V ++G+VAFL P + R IK + +K+ L +D Sbjct: 133 FTVDLSGVVAFL---PGSQVDVRPIKDPTSIMNIKQPFKILSMD 173
>sp|Q92HM4|RS1_RICCN 30S ribosomal protein S1 OS=Rickettsia conorii GN=rpsA PE=3 SV=1 Length = 568
Score = 38.1 bits (87), Expect = 0.030 Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 6/173 (3%) Frame = -2
Query: 535 KPLRYGNKRHDRDKGLIK---LLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARYNF 365 K L + H ++K ++K + +++I+V+ GLK + K E +A + + Sbjct: 26 KMLETVDTSHIKEKTVVKGQVIEIKNDIIIVDVGLKNEGRIPKSEFLALPEVGD------ 79
Query: 364 VGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKG 185 + ++ +EK+E + R I+ + K+ +W + + V G Sbjct: 80 --VVEVFIEKIEGRNGRT--------------ILSREKAVKEELWGQLEIMCSKGEFVDG 123
Query: 184 LIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIK---KVSPLKKKINFLEVD 35 IF +KGG+ V ++G+VAFL P + R IK + +K+ L +D Sbjct: 124 TIFGRVKGGFTVDLSGVVAFL---PGSQVDVRPIKDPTSIMNIKQPFKILSMD 173
>sp|Q48082|RS1_HAEIN 30S ribosomal protein S1 OS=Haemophilus influenzae GN=rpsA PE=3 SV=1 Length = 549
Score = 36.2 bits (82), Expect = 0.11 Identities = 20/69 (28%), Positives = 34/69 (49%) Frame = -2
Query: 232 WIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPLKKKI 53 WIE K + ++ V GLI +KGG+ V + G+ AFL S AR + + + Sbjct: 95 WIELEKAYEEKATVIGLIXGKVKGGFTVELNGVRAFLPGSLVDTRPAREADHLLGKELEF 154
Query: 52 NFLEVDSTK 26 +++D + Sbjct: 155 KVIKLDQKR 163
>sp|Q1RJH1|RS1_RICBR 30S ribosomal protein S1 OS=Rickettsia bellii (strain RML369-C) GN=rpsA PE=3 SV=1 Length = 572
Score = 35.8 bits (81), Expect = 0.15 Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (11%) Frame = -2
Query: 244 KKIVWIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFL---------LRSPSTNATA 92 K+ +W + I V G IF +KGG+ V ++G+VAFL ++ PS+ Sbjct: 107 KEELWGQLELICSKGEFVDGTIFGRVKGGFTVDLSGVVAFLPGSQVDVRPIKDPSSIMNI 166
Query: 91 RRIKKVSPLKKKINFLEV 38 R+ K+ + KK+ + V Sbjct: 167 RQPFKILSMDKKLGNIVV 184
>sp|P0AG70|RS1_SHIFL 30S ribosomal protein S1 OS=Shigella flexneri GN=rpsA PE=3 SV=1 Length = 557
Score = 33.9 bits (76), Expect = 0.57 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = -2
Query: 232 WIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPLKKK 56 WI K + D V G+I +KGG+ V + G+ AFL P + R ++ L+ K Sbjct: 95 WITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL---PGSLVDVRPVRDTLHLEGK 150
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q1XGC9 |
Definition |
tr|Q1XGC9|Q1XGC9_PHYPA Ribosomal protein S1 OS=Physcomitrella patens |
Align length |
159 |
Score (bit) |
96.3 |
E-value |
1.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP919922|Adiantum capillus-veneris mRNA, clone: YMU001_000130_G01. (563 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q1XGC9|Q1XGC9_PHYPA Ribosomal protein S1 OS=Physcomitrella pa... 96 1e-18 tr|Q7YAL7|Q7YAL7_CHAVU Ribosomal protein S1 OS=Chara vulgaris GN... 74 7e-12 tr|A8IFJ1|A8IFJ1_PHAVU S1 ribosomal protein OS=Phaseolus vulgari... 63 1e-08 tr|Q2F963|Q2F963_ORYSI Ribosomal protein S1 OS=Oryza sativa subs... 60 8e-08 tr|Q2F910|Q2F910_ORYSJ Ribosomal protein S1 OS=Oryza sativa subs... 60 8e-08 tr|Q8HCN1|Q8HCN1_ORYSJ Ribosomal protein S1 OS=Oryza sativa subs... 59 1e-07 tr|B8Q6Q0|B8Q6Q0_BAMOL Ribosomal protein S1 OS=Bambusa oldhamii ... 59 2e-07 tr|Q5IA15|Q5IA15_AGAAE Ribosomal protein S1 (Fragment) OS=Agave ... 59 2e-07 tr|Q35985|Q35985_WHEAT Rps1 OS=Triticum aestivum GN=RPS1A PE=4 SV=1 58 3e-07 tr|Q09EL3|Q09EL3_SORBI Ribosomal protein S1 OS=Sorghum bicolor G... 58 3e-07 tr|B6VJX0|B6VJX0_VITVI Ribosomal protein S1 OS=Vitis vinifera GN... 56 1e-06 tr|A8IFI1|A8IFI1_SOYBN S1 ribosomal protein OS=Glycine max GN=rp... 56 1e-06 tr|A7QCX9|A7QCX9_VITVI Chromosome undetermined scaffold_79, whol... 56 1e-06 tr|A5B207|A5B207_VITVI Putative uncharacterized protein OS=Vitis... 56 1e-06 tr|Q5M9Z3|Q5M9Z3_TOBAC Putative uncharacterized protein orf216 O... 56 2e-06 tr|Q5IA20|Q5IA20_9MAGN Ribosomal protein S1 (Fragment) OS=Laurus... 55 2e-06 tr|Q09EP1|Q09EP1_TRIDA Ribosomal protein S1 OS=Tripsacum dactylo... 55 2e-06 tr|Q5IA18|Q5IA18_MAHBE Ribosomal protein S1 (Fragment) OS=Mahoni... 55 3e-06 tr|Q5IA24|Q5IA24_AMBTC Ribosomal protein S1 (Fragment) OS=Ambore... 54 4e-06 tr|Q5IA14|Q5IA14_ESCCA Ribosomal protein S1 (Fragment) OS=Eschsc... 54 8e-06 tr|Q6R9F0|Q6R9F0_MAIZE Ribosomal protein S1 OS=Zea mays GN=rps1 ... 53 1e-05 tr|Q1KKB5|Q1KKB5_MAIZE Ribosomal protein S1 OS=Zea mays subsp. m... 53 1e-05 tr|Q0GR81|Q0GR81_ZEAPE Ribosomal protein S1 OS=Zea perennis GN=r... 53 1e-05 tr|Q0GR48|Q0GR48_ZEAMP Ribosomal protein S1 OS=Zea mays subsp. p... 53 1e-05 tr|B0BLE4|B0BLE4_CYCTA Ribosomal protein S1 OS=Cycas taitungensi... 53 1e-05 tr|A8IFL8|A8IFL8_ONOSP S1 ribosomal protein OS=Ononis spinosa GN... 53 1e-05 tr|A8IFK3|A8IFK3_PEA S1 ribosomal protein OS=Pisum sativum GN=rp... 53 1e-05 tr|Q0GRB0|Q0GRB0_ZEALU Ribosomal protein S1 OS=Zea luxurians GN=... 53 1e-05 tr|A8IFN5|A8IFN5_MEDSA Mitochondrial S1 ribosomal protein OS=Med... 53 1e-05 tr|Q5IA21|Q5IA21_EICCR Ribosomal protein S1 (Fragment) OS=Eichho... 52 2e-05
>tr|Q1XGC9|Q1XGC9_PHYPA Ribosomal protein S1 OS=Physcomitrella patens GN=rps1 PE=4 SV=1 Length = 243
Score = 96.3 bits (238), Expect = 1e-18 Identities = 69/159 (43%), Positives = 87/159 (54%), Gaps = 5/159 (3%) Frame = -2
Query: 562 REGALQYSVKPLRYGNKRHDRDKGLIKLLRSSNMILVNTGLKTPVILLKHEVIAEVSITE 383 R A+Q SVK LR NMILVNTGLKTP+I +HE + +V IT+ Sbjct: 18 RGSAIQCSVKKLR------------------QNMILVNTGLKTPIICFQHE-LKKVPITK 58
Query: 382 QARYNFVGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKK----IVWIEPTK 215 Q R+ +GIED+ + F E ++L KPL +K +VW E TK Sbjct: 59 QTRF-ILGIEDVEV---------FGEPK----------MLLPKPLERKCKSKLVWTELTK 98
Query: 214 IWR-DRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTN 101 IWR DRN +KG I NS+KGGYAV IAG +AFL +S N Sbjct: 99 IWRSDRNLIKGFILNSVKGGYAVAIAGHIAFLPKSLRRN 137
>tr|Q7YAL7|Q7YAL7_CHAVU Ribosomal protein S1 OS=Chara vulgaris GN=rps1 PE=4 SV=1 Length = 190
Score = 73.6 bits (179), Expect = 7e-12 Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 5/123 (4%) Frame = -2
Query: 466 NMILVNTGLKTPVILLKHEVIAEVSITEQARYNFVGIEDLNLEKVEVKELRFYEXXXXXX 287 NM++V TGLKT I LKHE+ + I ++ +NF +E VEV F E Sbjct: 40 NMVVVETGLKTRFICLKHELEEKRKIGDE--FNF------GVENVEV----FGEPK---- 83
Query: 286 XXXXPGIILSKPLNK----KIVWIEPTKIWR-DRNKVKGLIFNSIKGGYAVVIAGLVAFL 122 +IL K + + K+VW E T+IWR D N+VKG NS+ GGYAV IAG +AFL Sbjct: 84 ------MILPKQIKRICKNKLVWTELTQIWRSDNNRVKGFFLNSVNGGYAVAIAGHIAFL 137
Query: 121 LRS 113 +S Sbjct: 138 PKS 140
>tr|A8IFJ1|A8IFJ1_PHAVU S1 ribosomal protein OS=Phaseolus vulgaris GN=rps1 PE=4 SV=1 Length = 206
Score = 63.2 bits (152), Expect = 1e-08 Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 23/170 (13%) Frame = -2
Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-NFVGIEDL----NLEKVEVKE------- 320 M LV+ G TP I ++ E+ V I R+ N VG DL +L K ++ E Sbjct: 36 MFLVDAGPGTPRICMQDELTG-VPINRATRFENKVGFLDLVAGESLIKKKILERLFIDLV 94
Query: 319 -----------LRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173 RF + ++L + + + W++ KIWR KVKG I + Sbjct: 95 AGESLIKERAAARFNDLVGSTDVVAGEPLLLPRRFRQNLAWMKLNKIWRTNTKVKGFILD 154
Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPLKKKINFLEVDSTKT 23 +KGGY+V IAG + FL P + RR KK+S + I + S +T Sbjct: 155 KVKGGYSVAIAGFITFL---PFRSHNKRRRKKISNDRFTIESINPKSKRT 201
>tr|Q2F963|Q2F963_ORYSI Ribosomal protein S1 OS=Oryza sativa subsp. indica GN=rps1 PE=4 SV=1 Length = 172
Score = 60.1 bits (144), Expect = 8e-08 Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 26/173 (15%) Frame = -2
Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKVE-------- 329 M LV+ GL TP I ++ E+ + I R+ N V E L +++E Sbjct: 1 MFLVDAGLGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRIEERFFIDLV 59
Query: 328 -----VKE---LRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173 +KE RF + ++L + + WIE KIW+ + KVKG Sbjct: 60 AGESLIKERAAARFNDFVGSLDVAAGEPLLLPQRFRQNRAWIELKKIWQTKKKVKGFRIK 119
Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATAR---RIKKVSPLKKKINFLEVDSTKT 23 IKGGY+V IAG + FL + A I +P ++ I + D T+T Sbjct: 120 KIKGGYSVAIAGFITFLPFAKKKKRIANDRFTIDSFNPKRRDIVIIAADQTRT 172
>tr|Q2F910|Q2F910_ORYSJ Ribosomal protein S1 OS=Oryza sativa subsp. japonica GN=rps1 PE=4 SV=1 Length = 172
Score = 60.1 bits (144), Expect = 8e-08 Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 26/173 (15%) Frame = -2
Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKVE-------- 329 M LV+ GL TP I ++ E+ + I R+ N V E L +++E Sbjct: 1 MFLVDAGLGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRIEERFFIDLV 59
Query: 328 -----VKE---LRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173 +KE RF + ++L + + WIE KIW+ + KVKG Sbjct: 60 AGESLIKERAAARFNDFVGSLDVAAGEPLLLPQRFRQNRAWIELKKIWQTKKKVKGFRIK 119
Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATAR---RIKKVSPLKKKINFLEVDSTKT 23 IKGGY+V IAG + FL + A I +P ++ I + D T+T Sbjct: 120 KIKGGYSVAIAGFITFLPFAKKKKRIANDRFTIDSFNPKRRDIVIIAADQTRT 172
>tr|Q8HCN1|Q8HCN1_ORYSJ Ribosomal protein S1 OS=Oryza sativa subsp. japonica GN=rps1 PE=4 SV=2 Length = 172
Score = 59.3 bits (142), Expect = 1e-07 Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 26/173 (15%) Frame = -2
Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKVE-------- 329 M LV+ GL TP I ++ E+ + I R+ N V E L +++E Sbjct: 1 MFLVDAGLGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRIEERFFIDLV 59
Query: 328 -----VKE---LRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173 +KE RF + ++L + + WIE KIW+ + KVKG Sbjct: 60 AGESLIKERAAARFNDFVGFLDVAAGEPLLLPQRFRQNRAWIELKKIWQTKKKVKGFRIK 119
Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATAR---RIKKVSPLKKKINFLEVDSTKT 23 IKGGY V IAG + FL + A I +P ++ I + D T+T Sbjct: 120 KIKGGYLVAIAGFITFLPFAKKKKRIANDRFTIDSFNPKRRDIVIIAADQTRT 172
>tr|B8Q6Q0|B8Q6Q0_BAMOL Ribosomal protein S1 OS=Bambusa oldhamii GN=rps1 PE=4 SV=1 Length = 211
Score = 58.9 bits (141), Expect = 2e-07 Identities = 50/184 (27%), Positives = 74/184 (40%), Gaps = 28/184 (15%) Frame = -2
Query: 490 LIKLLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKV 332 +++L M LV+ G TP I ++ E+ + I R+ N V E L +++ Sbjct: 29 VLRLRLREEMFLVDAGPGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRI 87
Query: 331 ----------------EVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDR 200 E RF + ++L + + WIE KIWR + Sbjct: 88 FERFFIDLVAGESLIKERAAARFNDFVGSLDVAAGEPLLLPQRFRQNRAWIELKKIWRTK 147
Query: 199 NKVKGLIFNSIKGGYAVVIAGLVAFL-----LRSPSTNATARRIKKVSPLKKKINFLEVD 35 KVKG I IKGGY+V IAG + FL LR I +P ++ I D Sbjct: 148 KKVKGFIMKKIKGGYSVAIAGFITFLPFKKALRKKRIANDRFTIDSFNPKRRDIVIRAAD 207
Query: 34 STKT 23 T+T Sbjct: 208 QTRT 211
>tr|Q5IA15|Q5IA15_AGAAE Ribosomal protein S1 (Fragment) OS=Agave attenuata GN=rps1 PE=4 SV=1 Length = 153
Score = 58.5 bits (140), Expect = 2e-07 Identities = 33/97 (34%), Positives = 48/97 (49%) Frame = -2
Query: 412 EVIAEVSITEQARYNFVGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIV 233 E + + I E+ + V E L E+ RF++ ++L + +K Sbjct: 43 ESLIKKRILERFFIDLVAGESLIKERAAA---RFHDFVGSLDGGDGEPLLLPRRFRQKRA 99
Query: 232 WIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFL 122 W+E KIWR KVKG I N +KGGY+V IAG + FL Sbjct: 100 WMELKKIWRTNKKVKGFIINKVKGGYSVAIAGFITFL 136
>tr|Q35985|Q35985_WHEAT Rps1 OS=Triticum aestivum GN=RPS1A PE=4 SV=1 Length = 174
Score = 58.2 bits (139), Expect = 3e-07 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%) Frame = -2
Query: 268 IILSKPLNKKIVWIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATAR 89 ++L + + WIE KIWR + KVKG I IKGGY+V IAG FL P A + Sbjct: 88 LLLPQRFRQNRAWIELKKIWRTKKKVKGFIIKKIKGGYSVAIAGFTTFL---PFKKALLK 144
Query: 88 R--------IKKVSPLKKKINFLEVDSTKT 23 + I ++P ++ I + D T+T Sbjct: 145 KRIANDRFTIDSINPKRRDIVIIAADQTRT 174
>tr|Q09EL3|Q09EL3_SORBI Ribosomal protein S1 OS=Sorghum bicolor GN=rps1 PE=4 SV=1 Length = 183
Score = 58.2 bits (139), Expect = 3e-07 Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 33/183 (18%) Frame = -2
Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKV--------- 332 M LV+ GL TP I ++ E+ + I R+ N V E L +++ Sbjct: 1 MFLVDAGLGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRIFERFFIDLV 59
Query: 331 -------EVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173 E RF + ++L + + WIE KIWR + KVKG N Sbjct: 60 AGESLIKERAAARFNDFVGSLDVAAGEPLLLPQRFRQNRAWIELKKIWRTKKKVKGFQIN 119
Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVS----------PLKKKINFLEVDSTKT 23 I+GGY+V IAG + FL P A++ K+++ P ++ I + DS K Sbjct: 120 KIEGGYSVAIAGFITFL---PFKLKKAKKKKRIANARFTIDSFIPKRRDIVIIAADSNKN 176
Query: 22 KAK 14 K Sbjct: 177 LMK 179
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