BP919922
Clone id YMU001_000130_G01
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000130_G01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGATTTTGTGCTTTTGCTTTTGTTTTCGTGGAATCTACCTCTAGAAAATTGATTTTTT
TTTTGAGAGGTGAAACTTTTTTTATTCTTCTTGCGGTTGCGTTTGTAGAGGGACTTCTGA
GAAGGAAAGCTACGAGCCCTGCGATAACTACAGCATACCCACCCTTAATTGAATTGAAAA
TCAACCCTTTGACCTTGTTACGGTCACGCCAAATCTTAGTTGGTTCAATCCAAACTATTT
TCTTGTTCAATGGTTTTGACAAAATAATTCCCGGTTTACGCGGCTTTGGCAAAAGAAGTC
TTGGTTCATAAAAACGAAGCTCCTTTACTTCTACTTTTTCTAGATTCAAATCTTCGATTC
CAACAAAATTATACCTTGCTTGTTCAGTAATTGACACCTCTGCTATCACTTCATGTTTTA
AAAGGATTACAGGAGTTTTCAGTCCTGTATTCACCAAGATCATATTTGATGATCGTAACA
GTTTGATTAAACCCTTGTCCCTATCATGCCTTTTATTTCCGTATCGCAATGGCTTTACTG
AATATTGTAGAGCGCCTTCACGT
■■Homology search results ■■ -
sp_hit_id P26863
Definition sp|P26863|RT01_MARPO Ribosomal protein S1, mitochondrial OS=Marchantia polymorpha
Align length 152
Score (bit) 97.4
E-value 4.0e-20
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919922|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_G01.
(563 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P26863|RT01_MARPO Ribosomal protein S1, mitochondrial OS=Marc... 97 4e-20
sp|Q6NDP1|RS1_RHOPA 30S ribosomal protein S1 OS=Rhodopseudomonas... 44 5e-04
sp|P14129|RS1_RHIME 30S ribosomal protein S1 OS=Rhizobium melilo... 40 0.006
sp|Q68WL4|RS1_RICTY 30S ribosomal protein S1 OS=Rickettsia typhi... 39 0.014
sp|Q4ULF1|RS1_RICFE 30S ribosomal protein S1 OS=Rickettsia felis... 39 0.014
sp|Q9ZD28|RS1_RICPR 30S ribosomal protein S1 OS=Rickettsia prowa... 38 0.030
sp|Q92HM4|RS1_RICCN 30S ribosomal protein S1 OS=Rickettsia conor... 38 0.030
sp|Q48082|RS1_HAEIN 30S ribosomal protein S1 OS=Haemophilus infl... 36 0.11
sp|Q1RJH1|RS1_RICBR 30S ribosomal protein S1 OS=Rickettsia belli... 36 0.15
sp|P0AG70|RS1_SHIFL 30S ribosomal protein S1 OS=Shigella flexner... 34 0.57
sp|P0AG67|RS1_ECOLI 30S ribosomal protein S1 OS=Escherichia coli... 34 0.57
sp|P0AG68|RS1_ECOL6 30S ribosomal protein S1 OS=Escherichia coli... 34 0.57
sp|P0AG69|RS1_ECO57 30S ribosomal protein S1 OS=Escherichia coli... 34 0.57
sp|Q89AJ3|RS1_BUCBP 30S ribosomal protein S1 OS=Buchnera aphidic... 32 2.8
sp|P29344|RR1_SPIOL 30S ribosomal protein S1, chloroplastic OS=S... 32 2.8
sp|Q83E09|RS1_COXBU 30S ribosomal protein S1 OS=Coxiella burneti... 31 4.8
sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria mening... 30 6.3
sp|Q9HZ71|RS1_PSEAE 30S ribosomal protein S1 OS=Pseudomonas aeru... 30 8.2
sp|Q895G2|ISPH_CLOTE 4-hydroxy-3-methylbut-2-enyl diphosphate re... 30 8.2
sp|P45443|DYHC_NEUCR Dynein heavy chain, cytoplasmic OS=Neurospo... 30 8.2

>sp|P26863|RT01_MARPO Ribosomal protein S1, mitochondrial
OS=Marchantia polymorpha GN=RPS1 PE=3 SV=2
Length = 270

Score = 97.4 bits (241), Expect = 4e-20
Identities = 68/152 (44%), Positives = 90/152 (59%), Gaps = 9/152 (5%)
Frame = -2

Query: 466 NMILVNTGLKTPVILLKHEVIAEVSITEQARYNFVGIEDLNLEKVEVKELRFYEXXXXXX 287
N +LV+TGLKTP+I +HE + V IT+QAR++F GIED+ + F E
Sbjct: 32 NKVLVDTGLKTPIICFQHE-LKRVPITKQARFHF-GIEDVEV---------FGEPK---- 76

Query: 286 XXXXPGIILSKPLN----KKIVWIEPTKIWR-DRNKVKGLIFNSIKGGYAVVIAGLVAF- 125
++L KPL +K+VWIE TKIWR D+N VKG I NS+KGGYAV IAG +AF
Sbjct: 77 ------MLLPKPLEIKCKRKLVWIELTKIWRSDQNLVKGFILNSVKGGYAVAIAGYIAFL 130

Query: 124 ---LLRSPSTNATARRIKKVSPLKKKINFLEV 38
LLRS + RI + +K KI+ + V
Sbjct: 131 PKSLLRSRKVFYSQWRIFSILNMKPKISNIVV 162


>sp|Q6NDP1|RS1_RHOPA 30S ribosomal protein S1 OS=Rhodopseudomonas
palustris GN=rpsA PE=1 SV=1
Length = 565

Score = 43.9 bits (102), Expect = 5e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = -2

Query: 232 WIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPL 65
W + K +++ KV G+IFN +KGG+ V + G VAFL P + R I+ V+PL
Sbjct: 104 WGKLEKAFQNNEKVFGVIFNQVKGGFTVDLDGAVAFL---PRSQVDIRPIRDVAPL 156


>sp|P14129|RS1_RHIME 30S ribosomal protein S1 OS=Rhizobium meliloti
GN=rpsA PE=3 SV=2
Length = 568

Score = 40.4 bits (93), Expect = 0.006
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = -2

Query: 196 KVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPL 65
+V+G+IFN +KGG+ V + G VAFL P + R I+ V+PL
Sbjct: 113 RVEGIIFNQVKGGFTVDLDGAVAFL---PRSQVDIRPIRDVTPL 153


>sp|Q68WL4|RS1_RICTY 30S ribosomal protein S1 OS=Rickettsia typhi
GN=rpsA PE=3 SV=1
Length = 568

Score = 39.3 bits (90), Expect = 0.014
Identities = 40/173 (23%), Positives = 78/173 (45%), Gaps = 6/173 (3%)
Frame = -2

Query: 535 KPLRYGNKRHDRDKGLIK---LLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARYNF 365
K L+ + H ++K ++K + ++MI+V+ GLK + K E ++ + +
Sbjct: 26 KMLKTVDTSHIKEKTVVKGQVIEIKNDMIIVDVGLKNEGRIPKSEFLSLPEVGD------ 79

Query: 364 VGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKG 185
+ ++ +EK+E + R I+ + K+ +W + + V G
Sbjct: 80 --VVEVFIEKIEGRNGRT--------------ILSREKAVKEELWGQLEIMCSKGEFVDG 123

Query: 184 LIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIK---KVSPLKKKINFLEVD 35
IF +KGG+ V ++G+VAFL P + R IK + +K+ L +D
Sbjct: 124 TIFGRVKGGFTVDLSGVVAFL---PGSQVDVRPIKDPTSIMNIKQPFKILSMD 173


>sp|Q4ULF1|RS1_RICFE 30S ribosomal protein S1 OS=Rickettsia felis
GN=rpsA PE=3 SV=1
Length = 568

Score = 39.3 bits (90), Expect = 0.014
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Frame = -2

Query: 535 KPLRYGNKRHDRDKGLIK---LLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARYNF 365
K L + H ++K ++K + ++M++V+ GLK + K E +A + +
Sbjct: 26 KMLETVDTSHIKEKTVVKGQVIEIKNDMVIVDVGLKNEGRIPKSEFLALPEVGD------ 79

Query: 364 VGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKG 185
+ ++ +EK+E + R I+ + K+ +W + + V G
Sbjct: 80 --VVEVFIEKIEGRNGRT--------------ILSREKAVKEELWGQLEIMCSKGEFVDG 123

Query: 184 LIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIK---KVSPLKKKINFLEVD 35
IF +KGG+ V ++G+VAFL P + R IK + +K+ L +D
Sbjct: 124 TIFGRVKGGFTVDLSGVVAFL---PGSQVDVRPIKDPTSIMNIKQPFKILSMD 173


>sp|Q9ZD28|RS1_RICPR 30S ribosomal protein S1 OS=Rickettsia
prowazekii GN=rpsA PE=3 SV=1
Length = 568

Score = 38.1 bits (87), Expect = 0.030
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 6/164 (3%)
Frame = -2

Query: 508 HDRDKGLIK---LLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARYNFVGIEDLNLE 338
H ++K ++K + ++MI+V+ GLK + K E ++ + + + ++ +E
Sbjct: 35 HIKEKTVVKGQVIEIKNDMIIVDVGLKNEGRIPKSEFLSLPEVGD--------VVEVFIE 86

Query: 337 KVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFNSIKGG 158
K+E + R I+ + K+ +W + + V G IF +KGG
Sbjct: 87 KIEGRNGRT--------------ILSREKAVKEELWGQLEIMCSKGEFVDGTIFGRVKGG 132

Query: 157 YAVVIAGLVAFLLRSPSTNATARRIK---KVSPLKKKINFLEVD 35
+ V ++G+VAFL P + R IK + +K+ L +D
Sbjct: 133 FTVDLSGVVAFL---PGSQVDVRPIKDPTSIMNIKQPFKILSMD 173


>sp|Q92HM4|RS1_RICCN 30S ribosomal protein S1 OS=Rickettsia conorii
GN=rpsA PE=3 SV=1
Length = 568

Score = 38.1 bits (87), Expect = 0.030
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Frame = -2

Query: 535 KPLRYGNKRHDRDKGLIK---LLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARYNF 365
K L + H ++K ++K + +++I+V+ GLK + K E +A + +
Sbjct: 26 KMLETVDTSHIKEKTVVKGQVIEIKNDIIIVDVGLKNEGRIPKSEFLALPEVGD------ 79

Query: 364 VGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKG 185
+ ++ +EK+E + R I+ + K+ +W + + V G
Sbjct: 80 --VVEVFIEKIEGRNGRT--------------ILSREKAVKEELWGQLEIMCSKGEFVDG 123

Query: 184 LIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIK---KVSPLKKKINFLEVD 35
IF +KGG+ V ++G+VAFL P + R IK + +K+ L +D
Sbjct: 124 TIFGRVKGGFTVDLSGVVAFL---PGSQVDVRPIKDPTSIMNIKQPFKILSMD 173


>sp|Q48082|RS1_HAEIN 30S ribosomal protein S1 OS=Haemophilus
influenzae GN=rpsA PE=3 SV=1
Length = 549

Score = 36.2 bits (82), Expect = 0.11
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = -2

Query: 232 WIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPLKKKI 53
WIE K + ++ V GLI +KGG+ V + G+ AFL S AR + + +
Sbjct: 95 WIELEKAYEEKATVIGLIXGKVKGGFTVELNGVRAFLPGSLVDTRPAREADHLLGKELEF 154

Query: 52 NFLEVDSTK 26
+++D +
Sbjct: 155 KVIKLDQKR 163


>sp|Q1RJH1|RS1_RICBR 30S ribosomal protein S1 OS=Rickettsia bellii
(strain RML369-C) GN=rpsA PE=3 SV=1
Length = 572

Score = 35.8 bits (81), Expect = 0.15
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 9/78 (11%)
Frame = -2

Query: 244 KKIVWIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFL---------LRSPSTNATA 92
K+ +W + I V G IF +KGG+ V ++G+VAFL ++ PS+
Sbjct: 107 KEELWGQLELICSKGEFVDGTIFGRVKGGFTVDLSGVVAFLPGSQVDVRPIKDPSSIMNI 166

Query: 91 RRIKKVSPLKKKINFLEV 38
R+ K+ + KK+ + V
Sbjct: 167 RQPFKILSMDKKLGNIVV 184


>sp|P0AG70|RS1_SHIFL 30S ribosomal protein S1 OS=Shigella flexneri
GN=rpsA PE=3 SV=1
Length = 557

Score = 33.9 bits (76), Expect = 0.57
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -2

Query: 232 WIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPLKKK 56
WI K + D V G+I +KGG+ V + G+ AFL P + R ++ L+ K
Sbjct: 95 WITLEKAYEDAETVTGVINGKVKGGFTVELNGIRAFL---PGSLVDVRPVRDTLHLEGK 150


tr_hit_id Q1XGC9
Definition tr|Q1XGC9|Q1XGC9_PHYPA Ribosomal protein S1 OS=Physcomitrella patens
Align length 159
Score (bit) 96.3
E-value 1.0e-18
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP919922|Adiantum capillus-veneris mRNA, clone:
YMU001_000130_G01.
(563 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1XGC9|Q1XGC9_PHYPA Ribosomal protein S1 OS=Physcomitrella pa... 96 1e-18
tr|Q7YAL7|Q7YAL7_CHAVU Ribosomal protein S1 OS=Chara vulgaris GN... 74 7e-12
tr|A8IFJ1|A8IFJ1_PHAVU S1 ribosomal protein OS=Phaseolus vulgari... 63 1e-08
tr|Q2F963|Q2F963_ORYSI Ribosomal protein S1 OS=Oryza sativa subs... 60 8e-08
tr|Q2F910|Q2F910_ORYSJ Ribosomal protein S1 OS=Oryza sativa subs... 60 8e-08
tr|Q8HCN1|Q8HCN1_ORYSJ Ribosomal protein S1 OS=Oryza sativa subs... 59 1e-07
tr|B8Q6Q0|B8Q6Q0_BAMOL Ribosomal protein S1 OS=Bambusa oldhamii ... 59 2e-07
tr|Q5IA15|Q5IA15_AGAAE Ribosomal protein S1 (Fragment) OS=Agave ... 59 2e-07
tr|Q35985|Q35985_WHEAT Rps1 OS=Triticum aestivum GN=RPS1A PE=4 SV=1 58 3e-07
tr|Q09EL3|Q09EL3_SORBI Ribosomal protein S1 OS=Sorghum bicolor G... 58 3e-07
tr|B6VJX0|B6VJX0_VITVI Ribosomal protein S1 OS=Vitis vinifera GN... 56 1e-06
tr|A8IFI1|A8IFI1_SOYBN S1 ribosomal protein OS=Glycine max GN=rp... 56 1e-06
tr|A7QCX9|A7QCX9_VITVI Chromosome undetermined scaffold_79, whol... 56 1e-06
tr|A5B207|A5B207_VITVI Putative uncharacterized protein OS=Vitis... 56 1e-06
tr|Q5M9Z3|Q5M9Z3_TOBAC Putative uncharacterized protein orf216 O... 56 2e-06
tr|Q5IA20|Q5IA20_9MAGN Ribosomal protein S1 (Fragment) OS=Laurus... 55 2e-06
tr|Q09EP1|Q09EP1_TRIDA Ribosomal protein S1 OS=Tripsacum dactylo... 55 2e-06
tr|Q5IA18|Q5IA18_MAHBE Ribosomal protein S1 (Fragment) OS=Mahoni... 55 3e-06
tr|Q5IA24|Q5IA24_AMBTC Ribosomal protein S1 (Fragment) OS=Ambore... 54 4e-06
tr|Q5IA14|Q5IA14_ESCCA Ribosomal protein S1 (Fragment) OS=Eschsc... 54 8e-06
tr|Q6R9F0|Q6R9F0_MAIZE Ribosomal protein S1 OS=Zea mays GN=rps1 ... 53 1e-05
tr|Q1KKB5|Q1KKB5_MAIZE Ribosomal protein S1 OS=Zea mays subsp. m... 53 1e-05
tr|Q0GR81|Q0GR81_ZEAPE Ribosomal protein S1 OS=Zea perennis GN=r... 53 1e-05
tr|Q0GR48|Q0GR48_ZEAMP Ribosomal protein S1 OS=Zea mays subsp. p... 53 1e-05
tr|B0BLE4|B0BLE4_CYCTA Ribosomal protein S1 OS=Cycas taitungensi... 53 1e-05
tr|A8IFL8|A8IFL8_ONOSP S1 ribosomal protein OS=Ononis spinosa GN... 53 1e-05
tr|A8IFK3|A8IFK3_PEA S1 ribosomal protein OS=Pisum sativum GN=rp... 53 1e-05
tr|Q0GRB0|Q0GRB0_ZEALU Ribosomal protein S1 OS=Zea luxurians GN=... 53 1e-05
tr|A8IFN5|A8IFN5_MEDSA Mitochondrial S1 ribosomal protein OS=Med... 53 1e-05
tr|Q5IA21|Q5IA21_EICCR Ribosomal protein S1 (Fragment) OS=Eichho... 52 2e-05

>tr|Q1XGC9|Q1XGC9_PHYPA Ribosomal protein S1 OS=Physcomitrella
patens GN=rps1 PE=4 SV=1
Length = 243

Score = 96.3 bits (238), Expect = 1e-18
Identities = 69/159 (43%), Positives = 87/159 (54%), Gaps = 5/159 (3%)
Frame = -2

Query: 562 REGALQYSVKPLRYGNKRHDRDKGLIKLLRSSNMILVNTGLKTPVILLKHEVIAEVSITE 383
R A+Q SVK LR NMILVNTGLKTP+I +HE + +V IT+
Sbjct: 18 RGSAIQCSVKKLR------------------QNMILVNTGLKTPIICFQHE-LKKVPITK 58

Query: 382 QARYNFVGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKK----IVWIEPTK 215
Q R+ +GIED+ + F E ++L KPL +K +VW E TK
Sbjct: 59 QTRF-ILGIEDVEV---------FGEPK----------MLLPKPLERKCKSKLVWTELTK 98

Query: 214 IWR-DRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTN 101
IWR DRN +KG I NS+KGGYAV IAG +AFL +S N
Sbjct: 99 IWRSDRNLIKGFILNSVKGGYAVAIAGHIAFLPKSLRRN 137


>tr|Q7YAL7|Q7YAL7_CHAVU Ribosomal protein S1 OS=Chara vulgaris
GN=rps1 PE=4 SV=1
Length = 190

Score = 73.6 bits (179), Expect = 7e-12
Identities = 52/123 (42%), Positives = 69/123 (56%), Gaps = 5/123 (4%)
Frame = -2

Query: 466 NMILVNTGLKTPVILLKHEVIAEVSITEQARYNFVGIEDLNLEKVEVKELRFYEXXXXXX 287
NM++V TGLKT I LKHE+ + I ++ +NF +E VEV F E
Sbjct: 40 NMVVVETGLKTRFICLKHELEEKRKIGDE--FNF------GVENVEV----FGEPK---- 83

Query: 286 XXXXPGIILSKPLNK----KIVWIEPTKIWR-DRNKVKGLIFNSIKGGYAVVIAGLVAFL 122
+IL K + + K+VW E T+IWR D N+VKG NS+ GGYAV IAG +AFL
Sbjct: 84 ------MILPKQIKRICKNKLVWTELTQIWRSDNNRVKGFFLNSVNGGYAVAIAGHIAFL 137

Query: 121 LRS 113
+S
Sbjct: 138 PKS 140


>tr|A8IFJ1|A8IFJ1_PHAVU S1 ribosomal protein OS=Phaseolus vulgaris
GN=rps1 PE=4 SV=1
Length = 206

Score = 63.2 bits (152), Expect = 1e-08
Identities = 51/170 (30%), Positives = 76/170 (44%), Gaps = 23/170 (13%)
Frame = -2

Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-NFVGIEDL----NLEKVEVKE------- 320
M LV+ G TP I ++ E+ V I R+ N VG DL +L K ++ E
Sbjct: 36 MFLVDAGPGTPRICMQDELTG-VPINRATRFENKVGFLDLVAGESLIKKKILERLFIDLV 94

Query: 319 -----------LRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173
RF + ++L + + + W++ KIWR KVKG I +
Sbjct: 95 AGESLIKERAAARFNDLVGSTDVVAGEPLLLPRRFRQNLAWMKLNKIWRTNTKVKGFILD 154

Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVSPLKKKINFLEVDSTKT 23
+KGGY+V IAG + FL P + RR KK+S + I + S +T
Sbjct: 155 KVKGGYSVAIAGFITFL---PFRSHNKRRRKKISNDRFTIESINPKSKRT 201


>tr|Q2F963|Q2F963_ORYSI Ribosomal protein S1 OS=Oryza sativa subsp.
indica GN=rps1 PE=4 SV=1
Length = 172

Score = 60.1 bits (144), Expect = 8e-08
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 26/173 (15%)
Frame = -2

Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKVE-------- 329
M LV+ GL TP I ++ E+ + I R+ N V E L +++E
Sbjct: 1 MFLVDAGLGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRIEERFFIDLV 59

Query: 328 -----VKE---LRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173
+KE RF + ++L + + WIE KIW+ + KVKG
Sbjct: 60 AGESLIKERAAARFNDFVGSLDVAAGEPLLLPQRFRQNRAWIELKKIWQTKKKVKGFRIK 119

Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATAR---RIKKVSPLKKKINFLEVDSTKT 23
IKGGY+V IAG + FL + A I +P ++ I + D T+T
Sbjct: 120 KIKGGYSVAIAGFITFLPFAKKKKRIANDRFTIDSFNPKRRDIVIIAADQTRT 172


>tr|Q2F910|Q2F910_ORYSJ Ribosomal protein S1 OS=Oryza sativa subsp.
japonica GN=rps1 PE=4 SV=1
Length = 172

Score = 60.1 bits (144), Expect = 8e-08
Identities = 49/173 (28%), Positives = 74/173 (42%), Gaps = 26/173 (15%)
Frame = -2

Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKVE-------- 329
M LV+ GL TP I ++ E+ + I R+ N V E L +++E
Sbjct: 1 MFLVDAGLGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRIEERFFIDLV 59

Query: 328 -----VKE---LRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173
+KE RF + ++L + + WIE KIW+ + KVKG
Sbjct: 60 AGESLIKERAAARFNDFVGSLDVAAGEPLLLPQRFRQNRAWIELKKIWQTKKKVKGFRIK 119

Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATAR---RIKKVSPLKKKINFLEVDSTKT 23
IKGGY+V IAG + FL + A I +P ++ I + D T+T
Sbjct: 120 KIKGGYSVAIAGFITFLPFAKKKKRIANDRFTIDSFNPKRRDIVIIAADQTRT 172


>tr|Q8HCN1|Q8HCN1_ORYSJ Ribosomal protein S1 OS=Oryza sativa subsp.
japonica GN=rps1 PE=4 SV=2
Length = 172

Score = 59.3 bits (142), Expect = 1e-07
Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 26/173 (15%)
Frame = -2

Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKVE-------- 329
M LV+ GL TP I ++ E+ + I R+ N V E L +++E
Sbjct: 1 MFLVDAGLGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRIEERFFIDLV 59

Query: 328 -----VKE---LRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173
+KE RF + ++L + + WIE KIW+ + KVKG
Sbjct: 60 AGESLIKERAAARFNDFVGFLDVAAGEPLLLPQRFRQNRAWIELKKIWQTKKKVKGFRIK 119

Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATAR---RIKKVSPLKKKINFLEVDSTKT 23
IKGGY V IAG + FL + A I +P ++ I + D T+T
Sbjct: 120 KIKGGYLVAIAGFITFLPFAKKKKRIANDRFTIDSFNPKRRDIVIIAADQTRT 172


>tr|B8Q6Q0|B8Q6Q0_BAMOL Ribosomal protein S1 OS=Bambusa oldhamii
GN=rps1 PE=4 SV=1
Length = 211

Score = 58.9 bits (141), Expect = 2e-07
Identities = 50/184 (27%), Positives = 74/184 (40%), Gaps = 28/184 (15%)
Frame = -2

Query: 490 LIKLLRSSNMILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKV 332
+++L M LV+ G TP I ++ E+ + I R+ N V E L +++
Sbjct: 29 VLRLRLREEMFLVDAGPGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRI 87

Query: 331 ----------------EVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDR 200
E RF + ++L + + WIE KIWR +
Sbjct: 88 FERFFIDLVAGESLIKERAAARFNDFVGSLDVAAGEPLLLPQRFRQNRAWIELKKIWRTK 147

Query: 199 NKVKGLIFNSIKGGYAVVIAGLVAFL-----LRSPSTNATARRIKKVSPLKKKINFLEVD 35
KVKG I IKGGY+V IAG + FL LR I +P ++ I D
Sbjct: 148 KKVKGFIMKKIKGGYSVAIAGFITFLPFKKALRKKRIANDRFTIDSFNPKRRDIVIRAAD 207

Query: 34 STKT 23
T+T
Sbjct: 208 QTRT 211


>tr|Q5IA15|Q5IA15_AGAAE Ribosomal protein S1 (Fragment) OS=Agave
attenuata GN=rps1 PE=4 SV=1
Length = 153

Score = 58.5 bits (140), Expect = 2e-07
Identities = 33/97 (34%), Positives = 48/97 (49%)
Frame = -2

Query: 412 EVIAEVSITEQARYNFVGIEDLNLEKVEVKELRFYEXXXXXXXXXXPGIILSKPLNKKIV 233
E + + I E+ + V E L E+ RF++ ++L + +K
Sbjct: 43 ESLIKKRILERFFIDLVAGESLIKERAAA---RFHDFVGSLDGGDGEPLLLPRRFRQKRA 99

Query: 232 WIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFL 122
W+E KIWR KVKG I N +KGGY+V IAG + FL
Sbjct: 100 WMELKKIWRTNKKVKGFIINKVKGGYSVAIAGFITFL 136


>tr|Q35985|Q35985_WHEAT Rps1 OS=Triticum aestivum GN=RPS1A PE=4 SV=1
Length = 174

Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Frame = -2

Query: 268 IILSKPLNKKIVWIEPTKIWRDRNKVKGLIFNSIKGGYAVVIAGLVAFLLRSPSTNATAR 89
++L + + WIE KIWR + KVKG I IKGGY+V IAG FL P A +
Sbjct: 88 LLLPQRFRQNRAWIELKKIWRTKKKVKGFIIKKIKGGYSVAIAGFTTFL---PFKKALLK 144

Query: 88 R--------IKKVSPLKKKINFLEVDSTKT 23
+ I ++P ++ I + D T+T
Sbjct: 145 KRIANDRFTIDSINPKRRDIVIIAADQTRT 174


>tr|Q09EL3|Q09EL3_SORBI Ribosomal protein S1 OS=Sorghum bicolor
GN=rps1 PE=4 SV=1
Length = 183

Score = 58.2 bits (139), Expect = 3e-07
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 33/183 (18%)
Frame = -2

Query: 463 MILVNTGLKTPVILLKHEVIAEVSITEQARY-------NFVGIEDLNLEKV--------- 332
M LV+ GL TP I ++ E+ + I R+ N V E L +++
Sbjct: 1 MFLVDAGLGTPKICMQDELTG-LPIKRATRFENKVGSKNVVAGESLIKKRIFERFFIDLV 59

Query: 331 -------EVKELRFYEXXXXXXXXXXPGIILSKPLNKKIVWIEPTKIWRDRNKVKGLIFN 173
E RF + ++L + + WIE KIWR + KVKG N
Sbjct: 60 AGESLIKERAAARFNDFVGSLDVAAGEPLLLPQRFRQNRAWIELKKIWRTKKKVKGFQIN 119

Query: 172 SIKGGYAVVIAGLVAFLLRSPSTNATARRIKKVS----------PLKKKINFLEVDSTKT 23
I+GGY+V IAG + FL P A++ K+++ P ++ I + DS K
Sbjct: 120 KIEGGYSVAIAGFITFL---PFKLKKAKKKKRIANARFTIDSFIPKRRDIVIIAADSNKN 176

Query: 22 KAK 14
K
Sbjct: 177 LMK 179